DK961681 |
Clone id |
TST39A01NGRL0010_M21 |
Library |
TST39 |
Length |
653 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_M21. 5' end sequence. |
Accession |
DK961681 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2733Contig1 |
Sequence |
GCCGAGGTTTCCAAGGTTTTCTCTTCGTCCTCCCTCTCTCCCCTCGCGAGTCGCAGACGG CTTCCAAACTCCATAGCCAGTCAGTCCTGCAAGGCATCTCTCCCGTCCCTCAGAGCCTCC GATCTGACAAGGTACCGTGCTTTACCTTGCTTCCGATCTGTCATTTTTCCACCTCAGGGC CTGCTGCTTCAGCATGATCTACTTCGGCAAGCTCTGCCATTTAGATATTTAGAGTTAATC TTTCTATCAGAGTTCCACCTTGGAGACTTGCCCAGTATTTACGGATTTTTTCCCCATTTT CTCACATCGCCAGTCTCAAGCTCTCCAGAAAGCTTTTCTCTCATTGTCCCTGTAGCAGTT TCTATTTTCTCTTGTGTGAGCTTTTCATCACCGGCGCACCTGTGCGTTTGATCTACGTCC GTGAAGATGGCTCCNATGCAGGTGTCACTTCGCAGTGCCATGGGGGTTTTGAAGGATCAG ACTAGCATCTCCTTAGCCAAGGTAGCAAGTGCAGGTGTAGCTGACCTTGAAGTAGCTATT GTGAAGGCTACGAGCCATGATGACACTCCGATGGAGGAGAAATATGTGCAAGAGGTTCTC CACTTGACGTCCTATTCAAGGTCTTATGTTAGTTCATGCGTCCGGGCTATTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LF20 |
Definition |
sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis thaliana |
Align length |
58 |
Score (bit) |
77.0 |
E-value |
8.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NW76 |
Definition |
tr|A9NW76|A9NW76_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
61 |
Score (bit) |
80.9 |
E-value |
6.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961681|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_M21, 5' (653 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NW76|A9NW76_PICSI Putative uncharacterized protein OS=Picea... 81 6e-14 tr|B2D2J2|B2D2J2_BRAOL ENTH OS=Brassica oleracea GN=B67C16.2 PE=... 77 7e-13 tr|A7P5U4|A7P5U4_VITVI Chromosome chr4 scaffold_6, whole genome ... 77 7e-13 tr|Q501G2|Q501G2_ARATH At4g32285 OS=Arabidopsis thaliana PE=2 SV=1 75 5e-12 tr|A9TS29|A9TS29_PHYPA Predicted protein (Fragment) OS=Physcomit... 72 4e-11 tr|Q10NB4|Q10NB4_ORYSJ Os03g0275500 protein OS=Oryza sativa subs... 71 5e-11 tr|B7ZYW2|B7ZYW2_MAIZE Putative uncharacterized protein OS=Zea m... 71 5e-11 tr|A3AGK1|A3AGK1_ORYSJ Putative uncharacterized protein OS=Oryza... 71 5e-11 tr|A2XF36|A2XF36_ORYSI Putative uncharacterized protein OS=Oryza... 71 5e-11 tr|A9SIW0|A9SIW0_PHYPA Predicted protein OS=Physcomitrella paten... 68 4e-10 tr|Q65XV1|Q65XV1_ORYSJ cDNA, clone: J065141G20, full insert sequ... 68 6e-10 tr|B8AXC6|B8AXC6_ORYSI Putative uncharacterized protein OS=Oryza... 68 6e-10 tr|A3AZ92|A3AZ92_ORYSJ Putative uncharacterized protein OS=Oryza... 68 6e-10 tr|A7Q6W7|A7Q6W7_VITVI Chromosome chr12 scaffold_57, whole genom... 67 1e-09 tr|A7PX91|A7PX91_VITVI Chromosome chr12 scaffold_36, whole genom... 62 3e-08 tr|Q60EC1|Q60EC1_ORYSJ Putative clathrin assembly protein OS=Ory... 60 9e-08 tr|A3B472|A3B472_ORYSJ Putative uncharacterized protein OS=Oryza... 60 9e-08 tr|A2Y4V6|A2Y4V6_ORYSI Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|Q8LJJ6|Q8LJJ6_ORYSJ cDNA clone:002-148-A09, full insert seque... 58 4e-07 tr|A2WXL8|A2WXL8_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|A7Q7P7|A7Q7P7_VITVI Chromosome chr18 scaffold_61, whole genom... 57 1e-06 tr|A5AGG6|A5AGG6_VITVI Putative uncharacterized protein OS=Vitis... 57 1e-06 tr|Q658F5|Q658F5_ORYSJ Os06g0175500 protein OS=Oryza sativa subs... 55 3e-06 tr|B8LKD7|B8LKD7_PICSI Putative uncharacterized protein OS=Picea... 55 3e-06 tr|A4Q7L2|A4Q7L2_MEDTR ANTH OS=Medicago truncatula GN=MtrDRAFT_A... 55 4e-06 tr|A9RG11|A9RG11_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A7PFI9|A7PFI9_VITVI Chromosome chr11 scaffold_14, whole genom... 53 2e-05 tr|A5BPI4|A5BPI4_VITVI Putative uncharacterized protein OS=Vitis... 53 2e-05 tr|A7PFA2|A7PFA2_VITVI Chromosome chr11 scaffold_13, whole genom... 52 3e-05 tr|A5C2E3|A5C2E3_VITVI Putative uncharacterized protein OS=Vitis... 52 3e-05
>tr|A9NW76|A9NW76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 351
Score = 80.9 bits (198), Expect = 6e-14 Identities = 41/61 (67%), Positives = 50/61 (81%) Frame = +1
Query: 427 MAPMQVSLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHL 606 MAP + LR A+G +KDQTSIS+AKVAS DL+VAIVKATSHD+ P++EKYV E+LHL Sbjct: 1 MAPSK--LRKALGAVKDQTSISIAKVASNNAPDLDVAIVKATSHDEIPIDEKYVYEILHL 58
Query: 607 T 609 T Sbjct: 59 T 59
>tr|B2D2J2|B2D2J2_BRAOL ENTH OS=Brassica oleracea GN=B67C16.2 PE=4 SV=1 Length = 646
Score = 77.4 bits (189), Expect = 7e-13 Identities = 38/58 (65%), Positives = 46/58 (79%) Frame = +1
Query: 436 MQVSLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 M S+R A+G +KDQTSI +AKVAS DLEVAIVKATSHDD P EKY++E+L+LT Sbjct: 1 MAPSIRKAIGAVKDQTSIGIAKVASNTAPDLEVAIVKATSHDDDPASEKYIREILNLT 58
>tr|A7P5U4|A7P5U4_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032663001 PE=4 SV=1 Length = 620
Score = 77.4 bits (189), Expect = 7e-13 Identities = 41/61 (67%), Positives = 48/61 (78%) Frame = +1
Query: 427 MAPMQVSLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHL 606 MAP S+R A+G +KDQTSI +AK+AS DLEVAIVKATSHDD P EKYVQE+L+L Sbjct: 1 MAPS--SIRKAIGSVKDQTSIGIAKIASNMAPDLEVAIVKATSHDDDPAAEKYVQEILNL 58
Query: 607 T 609 T Sbjct: 59 T 59
>tr|Q501G2|Q501G2_ARATH At4g32285 OS=Arabidopsis thaliana PE=2 SV=1 Length = 635
Score = 74.7 bits (182), Expect = 5e-12 Identities = 37/58 (63%), Positives = 46/58 (79%) Frame = +1
Query: 436 MQVSLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 M +S+R A+GV+KDQTSI +AKVAS DLEVAIVKATSHDD +KY++E+L LT Sbjct: 1 MALSMRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILSLT 58
>tr|A9TS29|A9TS29_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149644 PE=4 SV=1 Length = 654
Score = 71.6 bits (174), Expect = 4e-11 Identities = 37/54 (68%), Positives = 43/54 (79%) Frame = +1
Query: 448 LRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 +R A+G LKDQTSI AKV A ADL+VA+VKATSHDD +EKYVQE+LHLT Sbjct: 1 IRKAIGGLKDQTSIGFAKVGGARAADLDVALVKATSHDDY-FDEKYVQEILHLT 53
>tr|Q10NB4|Q10NB4_ORYSJ Os03g0275500 protein OS=Oryza sativa subsp. japonica GN=Os03g0275500 PE=2 SV=1 Length = 651
Score = 71.2 bits (173), Expect = 5e-11 Identities = 33/55 (60%), Positives = 44/55 (80%) Frame = +1
Query: 445 SLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 ++R A+G +KDQTSI LAKV S +L+V IVKATSHDD P EE++++E+LHLT Sbjct: 5 TIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLT 59
>tr|B7ZYW2|B7ZYW2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 639
Score = 71.2 bits (173), Expect = 5e-11 Identities = 33/55 (60%), Positives = 44/55 (80%) Frame = +1
Query: 445 SLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 ++R A+G +KDQTSI LAKV S +L+V IVKATSHDD P EE++++E+LHLT Sbjct: 5 TIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLT 59
>tr|A3AGK1|A3AGK1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009923 PE=4 SV=1 Length = 614
Score = 71.2 bits (173), Expect = 5e-11 Identities = 33/55 (60%), Positives = 44/55 (80%) Frame = +1
Query: 445 SLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 ++R A+G +KDQTSI LAKV S +L+V IVKATSHDD P EE++++E+LHLT Sbjct: 5 TIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLT 59
>tr|A2XF36|A2XF36_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10952 PE=4 SV=1 Length = 651
Score = 71.2 bits (173), Expect = 5e-11 Identities = 33/55 (60%), Positives = 44/55 (80%) Frame = +1
Query: 445 SLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHLT 609 ++R A+G +KDQTSI LAKV S +L+V IVKATSHDD P EE++++E+LHLT Sbjct: 5 TIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDDEPAEERHIREILHLT 59
>tr|A9SIW0|A9SIW0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185426 PE=4 SV=1 Length = 642
Score = 68.2 bits (165), Expect = 4e-10 Identities = 37/61 (60%), Positives = 44/61 (72%) Frame = +1
Query: 427 MAPMQVSLRSAMGVLKDQTSISLAKVASAGVADLEVAIVKATSHDDTPMEEKYVQEVLHL 606 MA +R A+G LKDQTSI +AKV A DL+VAIVKATSHDD +EK+V E+LHL Sbjct: 1 MAIAPKKIRKAIGGLKDQTSIGIAKVGGAKAPDLDVAIVKATSHDDY-FDEKHVHEILHL 59
Query: 607 T 609 T Sbjct: 60 T 60
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