DK961696 |
Clone id |
TST39A01NGRL0010_N19 |
Library |
TST39 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_N19. 5' end sequence. |
Accession |
DK961696 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2188Contig1 |
Sequence |
TGGGTCAGCAAAAGTGAATTGGCTGGTAGTGAAGGGCCCTGGCACATGGAAAAGGGTCCT TTCCGTGTTTGCCTCATAACATATGGCCTTGCAGGGTTGATTGCTGCAATTGTTTATGGT GTCAAAGGCAGCAACTTTCTTGATGTACTGAAGGGGTTTGCAGGTCTTGCCATAGACTTC TTTCTTTTTCCTCAGGTGGTTGGGAATTATGTTTGGGAAGTTCAAGGCACCGTTCTTTCT TCTTCTTTCTACATGGGTATGACTTTCGTAAGGACTTTGCCTCATGTATACGACTTAGTG AGGAAGCTGGAGTTTTTTGCAATAAGAGACAGAAGGTATTACTATGCAAATCCGACTTGG GATTTCTATTCTAATGCTTGCCATGTTGTCATACCCTGTGGAGGTATGCTGATAGCTGTT TTGGTCTTCTGCCAGCAAAGGTATGGGGGGGCATTTTTCTCTTTAGCTTCTTGGAGGCAG AGACGGTCATATAATCAGATTTCTATGAATCCAATCTGACAAATTGGGGTTTAAACTTGA AGGTAGAGACGGTCATATAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P07814 |
Definition |
sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens |
Align length |
55 |
Score (bit) |
33.9 |
E-value |
0.57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RPI5 |
Definition |
tr|A9RPI5|A9RPI5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
124 |
Score (bit) |
119.0 |
E-value |
1.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961696|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_N19, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RPI5|A9RPI5_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|A7P1M1|A7P1M1_VITVI Chromosome chr19 scaffold_4, whole genome... 114 5e-24 tr|B6U1E6|B6U1E6_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-23 tr|A7R6L4|A7R6L4_VITVI Chromosome undetermined scaffold_1331, wh... 109 1e-22 tr|Q6I603|Q6I603_ORYSJ Os05g0557500 protein OS=Oryza sativa subs... 106 8e-22 tr|B8AWH7|B8AWH7_ORYSI Putative uncharacterized protein OS=Oryza... 106 8e-22 tr|A7P1M2|A7P1M2_VITVI Chromosome chr19 scaffold_4, whole genome... 106 8e-22 tr|A5BLZ0|A5BLZ0_VITVI Putative uncharacterized protein OS=Vitis... 105 2e-21 tr|Q9SVS7|Q9SVS7_ARATH Putative uncharacterized protein F17L22.1... 94 5e-18 tr|A7P1M0|A7P1M0_VITVI Chromosome chr19 scaffold_4, whole genome... 92 1e-17 tr|Q5QM71|Q5QM71_ORYSJ Putative uncharacterized protein B1144G04... 91 4e-17 tr|A2WTR7|A2WTR7_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|B8A7K3|B8A7K3_ORYSI Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A7P7M8|A7P7M8_VITVI Chromosome chr9 scaffold_7, whole genome ... 90 1e-16 tr|Q8S188|Q8S188_ORYSJ cDNA clone:J013086I08, full insert sequen... 88 3e-16 tr|A5CAV7|A5CAV7_VITVI Putative uncharacterized protein OS=Vitis... 88 4e-16 tr|Q5VRW0|Q5VRW0_ORYSJ Putative uncharacterized protein P0013F10... 86 1e-15 tr|A2ZPV6|A2ZPV6_ORYSJ Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A2WLA9|A2WLA9_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A2WTR6|A2WTR6_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|Q9C940|Q9C940_ARATH Putative uncharacterized protein F14G24.5... 75 2e-12 tr|Q0WPB8|Q0WPB8_ARATH Putative uncharacterized protein At1g5278... 75 2e-12 tr|B8A7K4|B8A7K4_ORYSI Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|A2ZWI5|A2ZWI5_ORYSJ Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|Q7XI95|Q7XI95_ORYSJ Putative uncharacterized protein P0453G03... 72 2e-11 tr|B8B7S6|B8B7S6_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q0D558|Q0D558_ORYSJ Os07g0580700 protein OS=Oryza sativa subs... 66 1e-09 tr|A3BLJ1|A3BLJ1_ORYSJ Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|A2YN09|A2YN09_ORYSI Putative uncharacterized protein OS=Oryza... 64 7e-09 tr|A7P7M9|A7P7M9_VITVI Chromosome chr9 scaffold_7, whole genome ... 57 7e-07
>tr|A9RPI5|A9RPI5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117439 PE=4 SV=1 Length = 476
Score = 119 bits (298), Expect = 1e-25 Identities = 57/124 (45%), Positives = 73/124 (58%), Gaps = 1/124 (0%) Frame = +1
Query: 148 LKGFAGLAIDFFLFPQVVGNYVWEVQGTV-LSSSFYMGMTFVRTLPHVYDLVRKLEFFAI 324 +K + GL +DF LFPQVVGN +W + LS FY GM VR+LPH+YDL R +F Sbjct: 353 IKAYGGLLLDFHLFPQVVGNILWGAKEQAPLSRPFYFGMALVRSLPHIYDLCRMFKFIPA 412
Query: 325 RDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRRSYNQIS 504 Y YANP WDFYS ++IP +L+A+LV+ QQR+GG WR R Y + Sbjct: 413 APNMYMYANPEWDFYSITSDILIPSVILLLAILVYMQQRWGGQCLLPRRWRSRFEYEMVD 472
Query: 505 MNPI 516 PI Sbjct: 473 AAPI 476
>tr|A7P1M1|A7P1M1_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027671001 PE=4 SV=1 Length = 896
Score = 114 bits (284), Expect = 5e-24 Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 14/181 (7%) Frame = +1
Query: 1 WVSKSELAGSEGPWHMEKGPFRVCLITYGLAGLIAAIVYGVKGSNFLDV----------- 147 W +K + +G W EK + L +Y +AG + A+ + + ++ Sbjct: 712 WAAKLKEGHQKGSWAAEKKVLYLALPSY-VAGCLIALFFNRGKNEYVQSYSLPDYQQHSL 770
Query: 148 ---LKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRKLEFF 318 L+ +AGL +D FLFPQ++ N LS SFY+G TFVR LPH YDL R Sbjct: 771 WGDLRSYAGLVLDGFLFPQILLNMFTSSTVKALSHSFYVGTTFVRLLPHTYDLYRAHNNA 830
Query: 319 AIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRRSYNQ 498 + Y YANP DFYS A V+IPCGG+L + ++F QQR+GG +R+ +Y + Sbjct: 831 ISFNGSYIYANPGADFYSTAWDVIIPCGGLLFSAIIFLQQRFGGRCILPKRFRELEAYEK 890
Query: 499 I 501 I Sbjct: 891 I 891
>tr|B6U1E6|B6U1E6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 907
Score = 112 bits (281), Expect = 1e-23 Identities = 66/186 (35%), Positives = 92/186 (49%), Gaps = 17/186 (9%) Frame = +1
Query: 1 WVSKSELAGSEGPWHMEKGPFRVCLITYGLAGLIAAIVY-----------------GVKG 129 W ++S A W EK +CL Y + G I +V+ V+ Sbjct: 719 WSARSVDASKAESWAAEKKVLWICLPLYIIGGAITWVVHMRSNHSRRMLRQVVHLKPVEQ 778
Query: 130 SNFLDVLKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRKL 309 F + L + GL +D FL PQV+ N + + LS FY+G T +R LPHVYD+ R+ Sbjct: 779 QAFWEDLVSYCGLILDGFLLPQVILNVFSDSKVRALSPGFYIGSTLIRVLPHVYDVFRRQ 838
Query: 310 EFFAIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRRS 489 F Y YA P D +S A +VIPCG +L++ L+F QQ GGAFF + R+ R Sbjct: 839 HFVPSLRPSYMYAGPRDDLFSLAWDIVIPCGALLLSALLFFQQWRGGAFFLCSKNRRTRE 898
Query: 490 YNQISM 507 Y +SM Sbjct: 899 YEMVSM 904
>tr|A7R6L4|A7R6L4_VITVI Chromosome undetermined scaffold_1331, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008266001 PE=4 SV=1 Length = 633
Score = 109 bits (272), Expect = 1e-22 Identities = 67/186 (36%), Positives = 88/186 (47%), Gaps = 19/186 (10%) Frame = +1
Query: 1 WVSKSELAGSEGPWHMEKGPFRVCLITYGLAGLIAAIVYGVKGSNFLDV----------- 147 W S+S W EK + L Y LIA V+ K S + + Sbjct: 440 WSSRSNDGSENALWVSEKKVLYLSLPLYAGGALIAWFVHQWKNSYQIPLPRTRLAPVNYN 499
Query: 148 --------LKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVR 303 LK +AGL +D FL PQ++ N + + L+S FY+G T VR LPH YDL R Sbjct: 500 QQHALWGELKSYAGLILDGFLLPQIMFNLFFNPKEKALASPFYVGTTVVRLLPHAYDLYR 559
Query: 304 KLEFFAIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQR 483 D Y YANP D YS A V+IPCGGML A L++ QQR+GG +R+ Sbjct: 560 AHSSTWKFDLSYIYANPRMDLYSTAWDVIIPCGGMLFAALIYLQQRFGGHCILPKRFRES 619
Query: 484 RSYNQI 501 Y ++ Sbjct: 620 SVYEKV 625
>tr|Q6I603|Q6I603_ORYSJ Os05g0557500 protein OS=Oryza sativa subsp. japonica GN=OJ1214_E03.16 PE=4 SV=1 Length = 421
Score = 106 bits (265), Expect = 8e-22 Identities = 64/173 (36%), Positives = 88/173 (50%), Gaps = 18/173 (10%) Frame = +1
Query: 40 WHMEKGPFRVCLITYGLAGLIAAIVYGVKGSN------------------FLDVLKGFAG 165 W EK +CL Y + G +AA V ++ +N F + L + G Sbjct: 246 WAAEKKVLWICLPLY-IIGAVAAWVVHMQFNNNRRMLRKVARLPRVNRHAFWEDLVSYGG 304
Query: 166 LAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRKLEFFAIRDRRYYY 345 L +D FL PQV+ N + LS FY+G T +R LPHVYD+ R F Y Y Sbjct: 305 LILDGFLLPQVILNACLGSKVKALSPGFYIGSTMIRALPHVYDVFRAKHFVPSLRPFYRY 364
Query: 346 ANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRRSYNQIS 504 ANP D +S A + IPCG +L++VL+F QQR+GGAFF + R+ Y +S Sbjct: 365 ANPRDDLFSLAWDIAIPCGAILLSVLLFLQQRFGGAFFICSKNRKASEYEMVS 417
>tr|B8AWH7|B8AWH7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20938 PE=4 SV=1 Length = 902
Score = 106 bits (265), Expect = 8e-22 Identities = 64/173 (36%), Positives = 88/173 (50%), Gaps = 18/173 (10%) Frame = +1
Query: 40 WHMEKGPFRVCLITYGLAGLIAAIVYGVKGSN------------------FLDVLKGFAG 165 W EK +CL Y + G +AA V ++ +N F + L + G Sbjct: 727 WAAEKKVLWICLPLY-IIGAVAAWVVHMQFNNNRRMLRKVARLPRVNRHAFWEDLVSYGG 785
Query: 166 LAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRKLEFFAIRDRRYYY 345 L +D FL PQV+ N + LS FY+G T +R LPHVYD+ R F Y Y Sbjct: 786 LILDGFLLPQVILNACLGSKVKALSPGFYIGSTMIRALPHVYDVFRAKHFVPSLRPFYRY 845
Query: 346 ANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRRSYNQIS 504 ANP D +S A + IPCG +L++VL+F QQR+GGAFF + R+ Y +S Sbjct: 846 ANPRDDLFSLAWDIAIPCGAILLSVLLFLQQRFGGAFFICSKNRKASEYEMVS 898
>tr|A7P1M2|A7P1M2_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027673001 PE=4 SV=1 Length = 926
Score = 106 bits (265), Expect = 8e-22 Identities = 65/186 (34%), Positives = 92/186 (49%), Gaps = 19/186 (10%) Frame = +1
Query: 1 WVSKSELAGSEGPWHMEKGPFRVCLITYGLAGLIA----------AIVYGVKGSNFL--- 141 W +K +G W EK V L +Y L LI+ V G+K S+ L Sbjct: 735 WSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSLNRTKTEYGAVKGLKASSSLISY 794
Query: 142 ------DVLKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVR 303 L+ +AGL +D FLFPQ++ N + LS FYMG T VR LPH YDL R Sbjct: 795 QQHSHWQDLRSYAGLTLDGFLFPQIILNMFISSRDEPLSCWFYMGTTLVRLLPHAYDLFR 854
Query: 304 KLEFFAIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQR 483 + + + + YANP DFYS + V+IPC +L A ++F QQR+GG ++ Sbjct: 855 AHNYVSGFNGSFLYANPGADFYSTSWDVIIPCVALLFAAIIFLQQRFGGRCILPRRFKDL 914
Query: 484 RSYNQI 501 +Y ++ Sbjct: 915 EAYEKV 920
>tr|A5BLZ0|A5BLZ0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027858 PE=4 SV=1 Length = 1269
Score = 105 bits (261), Expect = 2e-21 Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 19/186 (10%) Frame = +1
Query: 1 WVSKSELAGSEGPWHMEKGPFRVCLITYGLAGLIA----------AIVYGVKGSNFL--- 141 W +K +G W EK V L +Y L LI+ V G+K S+ L Sbjct: 1078 WSAKCGAENQKGLWVAEKNALYVSLPSYILGCLISLSXNRTKTEYGAVKGLKASSSLISY 1137
Query: 142 ------DVLKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVR 303 L +AGL +D FLFPQ++ N + LS FYMG T VR LPH YDL R Sbjct: 1138 QQHSHWQDLXSYAGLTLDGFLFPQIILNMFIXSRDEPLSRWFYMGTTLVRLLPHAYDLFR 1197
Query: 304 KLEFFAIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQR 483 + + + + YANP DFYS + V+IPC +L A ++F QQR+GG ++ Sbjct: 1198 AHNYVSGFNGSFLYANPGADFYSTSWDVIIPCVALLFAAIIFLQQRFGGRCILPRRFKDL 1257
Query: 484 RSYNQI 501 +Y ++ Sbjct: 1258 EAYEKV 1263
>tr|Q9SVS7|Q9SVS7_ARATH Putative uncharacterized protein F17L22.160 (Putative uncharacterized protein AT4g21700) OS=Arabidopsis thaliana GN=F17L22.160 PE=2 SV=1 Length = 962
Score = 94.0 bits (232), Expect = 5e-18 Identities = 66/185 (35%), Positives = 85/185 (45%), Gaps = 28/185 (15%) Frame = +1
Query: 31 EGPWHMEKGPFRVCLITYGLAGLIA----------AIVYGVK--GSNFL----------- 141 E W EK VCL Y GLIA IVY K N L Sbjct: 763 EDVWKAEKKVSYVCLPLYITGGLIAWLVNRNRTPKRIVYIGKPQARNLLYRPVNLKRSFQ 822
Query: 142 -----DVLKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRK 306 LK + GL +D FL PQ++ N L++ FY+G +FVR LPH YDL R Sbjct: 823 RPPLWKDLKSYGGLMLDAFLLPQILFNGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRS 882
Query: 307 LEFFAIRDRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGGAFFSLASWRQRR 486 + I D + YAN D+YS A ++I C G L A L+F QQR+GG F +R+ Sbjct: 883 HSYGKILDWSFIYANHKMDYYSTAWDIIILCIGFLFAFLIFLQQRFGGRCFIPKRFREYV 942
Query: 487 SYNQI 501 Y ++ Sbjct: 943 GYEKV 947
>tr|A7P1M0|A7P1M0_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027670001 PE=4 SV=1 Length = 1496
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/101 (43%), Positives = 64/101 (63%) Frame = +1
Query: 148 LKGFAGLAIDFFLFPQVVGNYVWEVQGTVLSSSFYMGMTFVRTLPHVYDLVRKLEFFAIR 327 L+ +GL +D+FL PQ++ N + + LS +FY+G T +R LPH Y+L L F Sbjct: 1380 LRSCSGLVLDWFLLPQILLNLFIDSREKALSHAFYIGTTSIRLLPHAYELYSALSFARGF 1439
Query: 328 DRRYYYANPTWDFYSNACHVVIPCGGMLIAVLVFCQQRYGG 450 D + YANP FY+ A + +IPCG +L AV++F QQ+YGG Sbjct: 1440 DGSWSYANPGAGFYTTAWNAMIPCGSLLFAVVLFLQQKYGG 1480
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