DK961706 |
Clone id |
TST39A01NGRL0010_O05 |
Library |
TST39 |
Length |
524 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_O05. 5' end sequence. |
Accession |
DK961706 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL67Contig1 |
Sequence |
AAGCGAAGTAACATCCACGCTCTTGCGCTCTCTGCACAGAGAACTGCAAGATCCGTCGCC ATGTATACTGCTCGGAGGAAGATCCACAAGGAGAAGGGGCTGGAGCCAGATGATTTTGAG GAGTCCGTTGCTCATGCTCTTTTCGATCTGGAGAACTCAAACCAGGAATTGAAGAGTGAC CTGCGAGACCTTTTCATCAACTCTGCCAAGCAAGTTGATATTTCAGGAAACCGGAAGGCT GTTATCATCCACGTGCCTTACAGGCTCTGCAAAGCCTTCCGAAAAATTCACTCTCGTCTT GTCCGGGAGTTGGAGAAGAAGTTCAGTGGGAAGGATGTTATTATGATTGCCACTAGACGT ATTTTGAGGCCTCCAAAGAAAGGGACGGCTGTAGCTCGCCCTCGTAATCGTACACTAACA GCTGTTCATGACGCTATTCTCGAAGATTTGGTGTACCCGGCTGAGATTGTTGGAAAGCGA GTACGCTTCCCTCTGGATGGATCAAGAAACATGCGGGTGTATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZNS1 |
Definition |
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina |
Align length |
154 |
Score (bit) |
244.0 |
E-value |
2.0e-64 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
153 |
Score (bit) |
258.0 |
E-value |
2.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961706|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_O05, 5' (524 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 258 2e-67 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 256 5e-67 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 254 2e-66 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 252 7e-66 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 251 2e-65 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 248 1e-64 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 246 6e-64 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 244 1e-63 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 244 2e-63 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 244 2e-63 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 244 2e-63 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 243 3e-63 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 241 2e-62 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 241 2e-62 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 241 2e-62 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 240 4e-62 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 238 1e-61 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 237 2e-61 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 237 3e-61 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 236 4e-61 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 235 1e-60 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 233 4e-60 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 233 4e-60 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 233 6e-60 tr|Q2EHP5|Q2EHP5_POPCA Putative 40S ribosomal protein S7 (Fragme... 232 7e-60 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 232 7e-60 tr|A3B2X6|A3B2X6_ORYSJ Putative uncharacterized protein OS=Oryza... 232 1e-59 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 231 1e-59 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 231 2e-59
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 258 bits (658), Expect = 2e-67 Identities = 128/153 (83%), Positives = 145/153 (94%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKAV 243 +TARRKI KEKG EPD+FEESVA ALFDLE++N ELKS+LRDLFINSAK+VD+SGNRKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 +IHVPYRL KAF+KIH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 VH+A+LEDLVYP+EIVGKRVR+ LDGSR MRVY Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVY 155
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 256 bits (654), Expect = 5e-67 Identities = 127/153 (83%), Positives = 144/153 (94%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKAV 243 +TARRKI KEKG EPD+FEESVA ALFDLE++N ELKS+LRDLFINSAK+VD+SGNRKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 424 VHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 VH+A+LEDLVYP+EIVGKRVR+ LDGSR MRVY Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVY 155
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 254 bits (648), Expect = 2e-66 Identities = 126/153 (82%), Positives = 145/153 (94%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKAV 243 +TARRKI KEKG EPD+FEESVA ALFDLE+++ ELKS+LRDLFINSAK+VD+SGNRKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 VH+A+LEDLV+P+EIVGKRVR+ LDGSR MRVY Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVY 155
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 252 bits (644), Expect = 7e-66 Identities = 124/154 (80%), Positives = 142/154 (92%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 MYTARRKI KEK EP++FEESVA ALFDLE++NQELKS+L+DLFINSA Q DISGNRKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V++HVPYRL KAFRKIH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 AVH+AILEDLVYPAEIVGKRVR+ LDGS+ M++Y Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIY 154
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 251 bits (641), Expect = 2e-65 Identities = 124/153 (81%), Positives = 142/153 (92%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKAV 243 +TARRKI KE G EPD+FEESVA ALFDLE++N ELKS+LRDLFINSAK+VD+SGNRKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVP+RL KAF+KIH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 VH+A+LEDLVYP+EIVGKR+R+ LDGSR MRVY Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVY 155
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 248 bits (634), Expect = 1e-64 Identities = 119/154 (77%), Positives = 143/154 (92%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 M+TAR+KI K+K LEP +FEESVA ALFDLEN+NQELKSDLRDL+INSA Q+D++GNRKA Sbjct: 1 MFTARKKIQKDKDLEPSEFEESVAQALFDLENNNQELKSDLRDLYINSAVQMDVAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IH+PYRL KA+RKIH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ RPR+RTLT Sbjct: 61 VVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVRPRSRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 AVHDA LED+VYPAEIVGKR+R+ LDGS+ ++++ Sbjct: 121 AVHDATLEDVVYPAEIVGKRIRYHLDGSKIIKIF 154
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 246 bits (627), Expect = 6e-64 Identities = 118/154 (76%), Positives = 141/154 (91%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 MYTAR+KI KEKGLEP +FE+SVA A FDLEN NQELKSDL+DL+IN+A Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAFRKIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 AVHD ILED+VYPAEIVGKRVR+ LDGS+ ++++ Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIF 154
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 244 bits (624), Expect = 1e-63 Identities = 118/154 (76%), Positives = 141/154 (91%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 MYTAR+KI KEK +EP +FEE VA ALFDLEN+NQELKSDL+DL+INSA Q+D++GNRKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAFRKIH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 VH+A+LED+VYPAEIVGKR+R+ LDGS+ ++++ Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIF 154
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 244 bits (623), Expect = 2e-63 Identities = 116/154 (75%), Positives = 141/154 (91%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 MYTAR+KI KEKGLEP +FE+SVA A FDLEN NQELKS+L+DL+IN+A Q+DI+GNRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 AVHD ILED+VYPAEIVGKR+R+ LDG++ ++++ Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIF 154
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 244 bits (623), Expect = 2e-63 Identities = 116/154 (75%), Positives = 141/154 (91%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAHALFDLENSNQELKSDLRDLFINSAKQVDISGNRKA 240 MYTAR+KI KEKGLEP +FE+SVA A FDLEN NQELKS+L+DL+IN+A Q+DI+GNRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 421 AVHDAILEDLVYPAEIVGKRVRFPLDGSRNMRVY 522 AVHD ILED+VYPAEIVGKR+R+ LDG++ ++++ Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIF 154
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