DK961716
Clone id TST39A01NGRL0010_O15
Library
Length 643
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_O15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCATTCATGCCAACAAAAGGAAATGGTGCCATAGGTTCTTTAGAGTTTACAAAAGAGGA
GAGGAAGGCCCTTGCATTGAAATCTGTTGAATCTCCTCCCAAATATGGAACTGCTGAACG
GCAGAAAGTGATTGATGAGATCCATGAAGAAATGTTGAAACGAGTGCAAAAGCTTCCAGC
AGAAGCTCCTAAAGAGGCTGAGAGTGAAGCTGCAAGCATGGGAACGGACAGTGACGGCTC
CAAAAATATTGAAGAGACTGTAGCACATGTGGCAGTTTTGCCTGAGGTTCAATCCAGTGA
AGATGTTCAGCCGATGGAGACAGCTGAAGAGCGGCCATCTGCTGTGGAATCAAGGGAAGT
GAGATCTTCACCACCTGCAAGGCCAATTACCAGGCTGCAAGCTTCTGATGATCAGTTCTT
AACATTGTTAGCAATCGGTCTCTTTGTCGCTCTAGCAGCTTTATTATTCAAGAAGTTCTA
CCATTATTTCTCCTGGATCAGTTTCAATTGACGAGTTATCGTTGTATTTAAGCGTTGGGA
GCTCTTGTACATTTGACTATCTGCATCACAGGCAGGTGTGGCAGAGGGTTGTGGAGCCGC
TTGCTCACTACATGTAAGCAAGATGCAGTTGTTTCTTGGGTCA
■■Homology search results ■■ -
sp_hit_id Q9LSP7
Definition sp|Q9LSP7|UBC32_ARATH Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana
Align length 54
Score (bit) 77.0
E-value 8.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961716|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_O15, 5'
(643 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LSP7|UBC32_ARATH Ubiquitin carrier protein E2 32 OS=Arabido... 77 8e-14
sp|Q9JJZ4|UB2J1_MOUSE Ubiquitin-conjugating enzyme E2 J1 OS=Mus ... 46 2e-04
sp|Q9Y385|UB2J1_HUMAN Ubiquitin-conjugating enzyme E2 J1 OS=Homo... 46 2e-04
sp|P40277|H1C_CHITE Histone H1C OS=Chironomus tentans PE=3 SV=1 31 6.3
sp|Q8IYB5|SMAP1_HUMAN Stromal membrane-associated protein 1 OS=H... 30 8.2

>sp|Q9LSP7|UBC32_ARATH Ubiquitin carrier protein E2 32
OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1
Length = 309

Score = 77.0 bits (188), Expect = 8e-14
Identities = 33/54 (61%), Positives = 46/54 (85%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPT NGA+GS+++ K+ER+ LA+KS E+PPKYG+ ERQK+IDEIH+ +L +
Sbjct: 119 AFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSK 172


>sp|Q9JJZ4|UB2J1_MOUSE Ubiquitin-conjugating enzyme E2 J1 OS=Mus
musculus GN=Ube2j1 PE=1 SV=2
Length = 318

Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2

Query: 5 FMPTKGNGAIGSLEFTKEERKALALKS 85
FMPTKG GAIGSL++T EER+ALA KS
Sbjct: 118 FMPTKGEGAIGSLDYTPEERRALAKKS 144


>sp|Q9Y385|UB2J1_HUMAN Ubiquitin-conjugating enzyme E2 J1 OS=Homo
sapiens GN=UBE2J1 PE=1 SV=2
Length = 318

Score = 45.8 bits (107), Expect = 2e-04
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2

Query: 5 FMPTKGNGAIGSLEFTKEERKALALKS 85
FMPTKG GAIGSL++T EER+ALA KS
Sbjct: 118 FMPTKGEGAIGSLDYTPEERRALAKKS 144


>sp|P40277|H1C_CHITE Histone H1C OS=Chironomus tentans PE=3 SV=1
Length = 221

Score = 30.8 bits (68), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2

Query: 8 MPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQK 127
+ TKG GA+GS + +K +K E PK A+ K
Sbjct: 97 LQTKGKGALGSFKLPAAAKKEKVVKKTEKKPKKAAAKPSK 136


>sp|Q8IYB5|SMAP1_HUMAN Stromal membrane-associated protein 1 OS=Homo
sapiens GN=SMAP1 PE=1 SV=2
Length = 467

Score = 30.4 bits (67), Expect = 8.2
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2

Query: 281 PEVQSSEDVQPMETAEERPSAVESREVRSSPPARPIT--RLQASDDQ 415
P +Q++ D +E +E+ + RE PA+P+T +LQ D Q
Sbjct: 153 PSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQ 199


tr_hit_id Q10MI2
Definition tr|Q10MI2|Q10MI2_ORYSJ Os03g0308000 protein OS=Oryza sativa subsp. japonica
Align length 54
Score (bit) 87.4
E-value 7.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961716|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_O15, 5'
(643 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q10MI2|Q10MI2_ORYSJ Os03g0308000 protein OS=Oryza sativa subs... 87 7e-16
tr|A3AH80|A3AH80_ORYSJ Putative uncharacterized protein OS=Oryza... 87 7e-16
tr|B8AMH5|B8AMH5_ORYSI Putative uncharacterized protein OS=Oryza... 87 1e-15
tr|A7Q8P3|A7Q8P3_VITVI Chromosome chr5 scaffold_64, whole genome... 79 2e-13
tr|A5BBF4|A5BBF4_VITVI Putative uncharacterized protein OS=Vitis... 79 2e-13
tr|B8LP14|B8LP14_PICSI Putative uncharacterized protein OS=Picea... 78 4e-13
tr|A1IW08|A1IW08_9LAMI Ubiquitin conjugating enzyme (Fragment) O... 77 7e-13
tr|B6TT84|B6TT84_MAIZE Ubiquitinating enzyme OS=Zea mays PE=2 SV=1 75 4e-12
tr|A8JBR3|A8JBR3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 68 4e-10
tr|A9U0W3|A9U0W3_PHYPA Predicted protein OS=Physcomitrella paten... 66 2e-09
tr|Q6P7Y0|Q6P7Y0_DANRE Novel protein (Zgc:63554) OS=Danio rerio ... 47 0.001
tr|Q9I9B8|Q9I9B8_CHICK Non-Canonical UBiquitin Conjugating Enzym... 46 0.002
tr|Q5U4Q5|Q5U4Q5_XENTR Ubiquitin-conjugating enzyme E2, J1 (UBC6... 46 0.002
tr|Q4RDQ4|Q4RDQ4_TETNG Chromosome undetermined SCAF15992, whole ... 46 0.002
tr|B5X1W4|B5X1W4_SALSA Ubiquitin-conjugating enzyme E2 J1 OS=Sal... 46 0.002
tr|A3KMT1|A3KMT1_XENLA LOC100049091 protein OS=Xenopus laevis GN... 46 0.002
tr|Q3UDP8|Q3UDP8_MOUSE Putative uncharacterized protein OS=Mus m... 46 0.002
tr|Q3TV38|Q3TV38_MOUSE Putative uncharacterized protein OS=Mus m... 46 0.002
tr|B1AWT7|B1AWT7_MOUSE Ubiquitin-conjugating enzyme E2 J1 (Fragm... 46 0.002
tr|A3KG52|A3KG52_MOUSE Ubiquitin-conjugating enzyme E2 J1 (Fragm... 46 0.002
tr|A3KG50|A3KG50_MOUSE Ubiquitin-conjugating enzyme E2 J1 OS=Mus... 46 0.002
tr|Q06AB1|Q06AB1_PIG UB2J1 OS=Sus scrofa PE=2 SV=1 46 0.002
tr|Q53F25|Q53F25_HUMAN Ubiquitin-conjugating enzyme E2, J1 varia... 46 0.002
tr|B4DUF8|B4DUF8_HUMAN cDNA FLJ52165, highly similar to Ubiquiti... 46 0.002
tr|Q017C9|Q017C9_OSTTA Non-Canonical UBiquitin Conjugating Enzym... 45 0.004
tr|Q4RCM5|Q4RCM5_TETNG Chromosome undetermined SCAF18556, whole ... 45 0.005
tr|B6MS25|B6MS25_BRAFL Putative uncharacterized protein OS=Branc... 44 0.006
tr|B7QB87|B7QB87_IXOSC Ubiquitin protein ligase, putative (Fragm... 42 0.042
tr|B6NYE5|B6NYE5_BRAFL Putative uncharacterized protein OS=Branc... 42 0.042
tr|Q54U33|Q54U33_DICDI Putative uncharacterized protein OS=Dicty... 39 0.27

>tr|Q10MI2|Q10MI2_ORYSJ Os03g0308000 protein OS=Oryza sativa subsp.
japonica GN=Os03g0308000 PE=2 SV=1
Length = 313

Score = 87.4 bits (215), Expect = 7e-16
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R
Sbjct: 120 AFMPTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLSR 173


>tr|A3AH80|A3AH80_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_010152 PE=3 SV=1
Length = 295

Score = 87.4 bits (215), Expect = 7e-16
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R
Sbjct: 102 AFMPTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLSR 155


>tr|B8AMH5|B8AMH5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_11252 PE=4 SV=1
Length = 312

Score = 86.7 bits (213), Expect = 1e-15
Identities = 40/54 (74%), Positives = 49/54 (90%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R
Sbjct: 119 AFMPTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLGR 172


>tr|A7Q8P3|A7Q8P3_VITVI Chromosome chr5 scaffold_64, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033129001
PE=3 SV=1
Length = 297

Score = 79.3 bits (194), Expect = 2e-13
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKRVQKLXX 181
AFMPT NGA+GSL++ KEER ALA+KS E+ PK+GT ERQK+IDEIHE ML + +
Sbjct: 119 AFMPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSKSPPV-P 177

Query: 182 XXXXXXXXXXXXMGTDSDGSKNIEETVAHVAVLPEVQSS-------EDVQPMETAEERPS 340
+ +G N A +A E+ E+ P PS
Sbjct: 178 QLNSSQAPEEPSTNREGEGQTNPPNGSA-IAAADELSDPRVADRIVEEEPPQVPLNANPS 236

Query: 341 AVESREVRSSPPARPITRLQ-ASDDQFLTXXXXXXXXXXXXXXFKKF 478
V + + +P+ R+Q +DD+ LT KKF
Sbjct: 237 PVSRQASAARLLQKPMPRVQRQADDRLLTWAAVGLTIAIMVLLLKKF 283


>tr|A5BBF4|A5BBF4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_020701 PE=3 SV=1
Length = 297

Score = 79.0 bits (193), Expect = 2e-13
Identities = 57/167 (34%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKRVQKLXX 181
AFMPT NGA+GSL++ KEER ALA+KS E+ PK+GT ERQK+IDEIHE ML + +
Sbjct: 119 AFMPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSKSPPV-P 177

Query: 182 XXXXXXXXXXXXMGTDSDGSKNIEETVAHVAVLPEVQSS-------EDVQPMETAEERPS 340
+ +G N A +A E+ E+ P PS
Sbjct: 178 QLNSSQAPEEPSTNREGEGQTNPPNGSA-IAAADELSDPRVADRIVEEEPPQVPLNANPS 236

Query: 341 AVESREVRSSPPARPITRLQ-ASDDQFLTXXXXXXXXXXXXXXFKKF 478
V + +P+ R+Q +DD+ LT KKF
Sbjct: 237 PVSRQASAVRLLQKPVPRVQRQADDRLLTWAAVGLTIAIMVLLLKKF 283


>tr|B8LP14|B8LP14_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 307

Score = 78.2 bits (191), Expect = 4e-13
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPTK GA+GSL+++KEER ALA+KS PPKYG A+RQ++IDE+HE ML +
Sbjct: 118 AFMPTKPEGAVGSLDYSKEERTALAIKSRTHPPKYGNADRQRLIDEVHEYMLNK 171


>tr|A1IW08|A1IW08_9LAMI Ubiquitin conjugating enzyme (Fragment)
OS=Phillyrea latifolia GN=ophe-6 PE=2 SV=1
Length = 167

Score = 77.4 bits (189), Expect = 7e-13
Identities = 47/120 (39%), Positives = 66/120 (55%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKRVQKLXX 181
AFMPT NGA+GSL++TKEE++ LA+KS E+ PK+G+ ERQK+IDEIHE ML + +
Sbjct: 53 AFMPTNPNGALGSLDYTKEEKRDLAIKSREAAPKFGSPERQKLIDEIHEYMLSKAPPVPQ 112

Query: 182 XXXXXXXXXXXXMGTDSDGSKNIEETVAHVAVLPEVQSSEDVQPMETAEERPSAVESREV 361
+ +N E V E S+ D++ AEE P+A S +
Sbjct: 113 GSQGSKVQATTEENENQGSPQNAFEGV------EEELSNPDIEDGIVAEE-PNATPSNAI 165


>tr|B6TT84|B6TT84_MAIZE Ubiquitinating enzyme OS=Zea mays PE=2 SV=1
Length = 309

Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 163
AFMPT GA+GSL++ E+R+ALA+KS E PPK+G+ +RQK+IDEIHE+ML +
Sbjct: 120 AFMPTNPGGALGSLDYKPEDRRALAIKSREVPPKFGSPQRQKLIDEIHEQMLSK 173


>tr|A8JBR3|A8JBR3_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_185318 PE=3
SV=1
Length = 178

Score = 68.2 bits (165), Expect = 4e-10
Identities = 29/52 (55%), Positives = 43/52 (82%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEML 157
AFMP+ GNGA+G+++FTK+ER+ LA +S P++G+AERQ+VID++H ML
Sbjct: 120 AFMPSPGNGALGAIDFTKDERRILAARSRTELPRFGSAERQRVIDDMHARML 171


>tr|A9U0W3|A9U0W3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_153985 PE=3 SV=1
Length = 171

Score = 66.2 bits (160), Expect = 2e-09
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +2

Query: 2 AFMPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIH 145
AFMPTK +GA+GSL++TKEER+ LA+ S S PK+G AERQ +I+E+H
Sbjct: 119 AFMPTKPDGALGSLDYTKEERRKLAINSRLSAPKFGNAERQALINEVH 166