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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961718
Clone id TST39A01NGRL0010_O17
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_O17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAGTCGAGCACTTTGAAGGAAGCAGAGAGAAGGAGAGGGGGCCCGAGAGGGAGAAGCTCG
TGTTTGTTTGCAGAAATGGCTGCCATGCAGGCGACATTGGGCGTTTCCTGCCCTTCTTCG
TCTCTATGCAAGTCGTCTTTCTTGGGGAGCGCCTCTCGTCTTTCTCGGGTGGCCTCTGCT
ATTGCCCCTTCCCCTGTCCGTGCCTTCAAGGTCGAGGCAAAGAAAGGCGAATGGCTTCCC
GGTCTGGCATCCCCTGCTTACCTAGACGGAAACCTTGCTGGTGACAATGGCTTCGACCCC
CTTGGCTTGGCTGAGGATCCTGCCAACCTTAAATGGTATGTGCAAGCAGAGCTTCAAAAT
GGAAGATGGGCAATGCTTGGAGTAGCTGGCATGTTGATCCCCGACCTCTTGACAAAGATT
GGTATCATCAATGTTCCTGCATGGTATGATGCGGGCAAGGTCGAGTACTTCGCCCCCGCC
TCCACTCTCTTTGTGATCGAATTCATCTTGTTCCACTATGTGGAGGTGAGAAGATGGCAA
GACATCAAGTACCCTGGCAGTGTGAATGCCGATCCGTTCAACCCTAAGCTTACTCTGCCC
CCTGGCGAGGTTGGATACCCTGGAGGCATCTTCAACCCCTTCAATTTCCCTACTTCTCTG
GAAT
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 154
Score (bit) 263.0
E-value 5.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961718|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_O17, 5'
         (664 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   263   5e-70
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   259   7e-69
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   195   2e-49
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   174   3e-43
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   169   9e-42
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   102   1e-21
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   101   4e-21
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   100   1e-20
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    98   3e-20
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    92   2e-18
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    86   1e-16
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    83   1e-15
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    71   4e-12
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   2e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   4e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    63   2e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   3e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    61   6e-09
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    61   6e-09
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    60   1e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    60   1e-08
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    60   1e-08
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   2e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   2e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   3e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   3e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  263 bits (673), Expect = 5e-70
 Identities = 123/154 (79%), Positives = 135/154 (87%)
 Frame = +1

Query: 202 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 381
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 382 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 561
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 166

Query: 562 VNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
           VN DP   + +LP GEVGYPGGIFNP NF  + E
Sbjct: 167 VNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQE 200


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  259 bits (663), Expect = 7e-69
 Identities = 122/158 (77%), Positives = 134/158 (84%)
 Frame = +1

Query: 190 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 369
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 370 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 549
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 550 YPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
            PGSVN DP   + +LP GEVGYPGGIFNP NF  +LE
Sbjct: 162 NPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLE 199


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  195 bits (495), Expect = 2e-49
 Identities = 99/163 (60%), Positives = 116/163 (71%), Gaps = 1/163 (0%)
 Frame = +1

Query: 163 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 342
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 343 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 519
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 520 VEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNF 648
           VE+RRWQDIK PGSVN DP     +LPP E GYPG +FNP NF
Sbjct: 132 VEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNF 174


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  174 bits (442), Expect = 3e-43
 Identities = 87/167 (52%), Positives = 107/167 (64%), Gaps = 6/167 (3%)
 Frame = +1

Query: 166 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 330
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 331 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 510
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 511 FHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPGGI-FNPFNF 648
             + E RRW DI  PG VN DP  P   L   +VGYPGG+ F+P  +
Sbjct: 161 IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 207



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 265 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 432
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  169 bits (429), Expect = 9e-42
 Identities = 79/140 (56%), Positives = 98/140 (70%), Gaps = 1/140 (0%)
 Frame = +1

Query: 232 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 411
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 412 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKL 591
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  PG VN DP  P  
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 592 TLPPGEVGYPGGI-FNPFNF 648
            L   +VGYPGG+ F+P  +
Sbjct: 188 KLTGTDVGYPGGLWFDPLGW 207



 Score = 33.9 bits (76), Expect = 0.79
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 265 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 432
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  102 bits (255), Expect = 1e-21
 Identities = 73/182 (40%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
 Frame = +1

Query: 157 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 330
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 331 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 471
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 472 APASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF--NPKLTLPPGEVGYPGG-IFNPF 642
           A   TLFV+E  L  + E RR+QD   PGS+    F    K     G+  YPGG +FNP 
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPL 209

Query: 643 NF 648
            F
Sbjct: 210 GF 211



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 235 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 414
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 415 KIG 423
            +G
Sbjct: 247 GVG 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  101 bits (251), Expect = 4e-21
 Identities = 68/172 (39%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
 Frame = +1

Query: 163 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 324
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 325 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 495
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 496 IEFILFHYVEVRRWQDIKYPGSVNADPFNP------KLTLPPGEVGYPGGIF 633
            + IL  +VE +RW D   P S + +   P            GE GYPGG F
Sbjct: 146 TQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKF 197


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 99.8 bits (247), Expect = 1e-20
 Identities = 63/151 (41%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
 Frame = +1

Query: 217 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 378
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 379 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPG 558
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPD 171

Query: 559 SVNADPFNP------KLTLPPGEVGYPGGIF 633
           S + +   P        +   GE GYPGG F
Sbjct: 172 SQSVEWATPWSRTAENFSNSTGEQGYPGGKF 202


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 71/178 (39%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
 Frame = +1

Query: 178 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 339
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 340 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 492
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 493 VIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVG-----YPGG-IFNPFNF 648
           V+E  L  + E RR+QD   PGS+    F   L L  G  G     YPGG  FNP  F
Sbjct: 159 VLEMALMGFAEHRRFQDWAKPGSMGKQYF---LGLEKGFGGSGNPAYPGGPFFNPLGF 213



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +1

Query: 241 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 420
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 421 G 423
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 92.4 bits (228), Expect = 2e-18
 Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
 Frame = +1

Query: 217 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 378
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 379 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQDIK 549
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D  
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 163

Query: 550 YPGSVNADPFNP------KLTLPPGEVGYPGGIF 633
              S + D   P            GE GYPGG F
Sbjct: 164 DNDSQSIDWATPWSKTAENFANFTGEQGYPGGKF 197
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 193
Score (bit) 275.0
E-value 2.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961718|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_O17, 5'
         (664 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   275   2e-72
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   273   5e-72
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   271   2e-71
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   269   1e-70
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   267   5e-70
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   266   7e-70
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   265   2e-69
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   262   2e-68
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   261   2e-68
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   259   1e-67
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   258   2e-67
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   257   5e-67
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   256   9e-67
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   253   6e-66
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   251   3e-65
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   249   8e-65
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   248   2e-64
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   244   3e-63
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   244   3e-63
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   243   1e-62
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   241   2e-62
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   241   3e-62
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   238   2e-61
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   235   2e-60
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   217   5e-55
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   216   1e-54
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   216   1e-54
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   216   1e-54
tr|B6DZ12|B6DZ12_9MAGN Chloroplast chlorophyll a-b binding prote...   216   1e-54
tr|B6DYZ6|B6DYZ6_LIQFO Chloroplast chlorophyll a-b binding prote...   216   1e-54

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  275 bits (703), Expect = 2e-72
 Identities = 136/193 (70%), Positives = 152/193 (78%), Gaps = 1/193 (0%)
 Frame = +1

Query: 88  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 264
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 265 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 444
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 445 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPG 624
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP   + +LPP EVGYPG
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQYSLPPNEVGYPG 185

Query: 625 GIFNPFNFPTSLE 663
           GIFNP NF  S+E
Sbjct: 186 GIFNPLNFSPSME 198


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  273 bits (699), Expect = 5e-72
 Identities = 129/166 (77%), Positives = 144/166 (86%)
 Frame = +1

Query: 166 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 345
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 346 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 525
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 526 VRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
           +RRWQDIKYPGSVN DP   + +LPP EVGYPGGIFNP NF  S+E
Sbjct: 146 LRRWQDIKYPGSVNQDPLFKQYSLPPNEVGYPGGIFNPLNFSPSME 191


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  271 bits (694), Expect = 2e-71
 Identities = 135/193 (69%), Positives = 149/193 (77%), Gaps = 1/193 (0%)
 Frame = +1

Query: 88  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 264
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 265 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 444
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 445 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPG 624
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP EVGYPG
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPVFKNYSLPPNEVGYPG 185

Query: 625 GIFNPFNFPTSLE 663
           GIFNP NF  S+E
Sbjct: 186 GIFNPLNFSPSME 198


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  269 bits (687), Expect = 1e-70
 Identities = 133/193 (68%), Positives = 148/193 (76%), Gaps = 1/193 (0%)
 Frame = +1

Query: 88  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 264
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 265 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 444
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 445 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPG 624
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP EVGYPG
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDPIXKSYSLPPNEVGYPG 185

Query: 625 GIFNPFNFPTSLE 663
           GIFNP NF  S+E
Sbjct: 186 GIFNPLNFSPSME 198


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  267 bits (682), Expect = 5e-70
 Identities = 125/158 (79%), Positives = 136/158 (86%)
 Frame = +1

Query: 190 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 369
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 370 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 549
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 550 YPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
            PGSVN DP   + +LP GEVGYPGGIFNP NF  +LE
Sbjct: 162 NPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLE 199


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  266 bits (681), Expect = 7e-70
 Identities = 124/158 (78%), Positives = 135/158 (85%)
 Frame = +1

Query: 190 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 369
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 370 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 549
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 550 YPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
            PGSVN DP     +LPP EVGYPGGIFNP NF  + E
Sbjct: 162 NPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPTEE 199


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  265 bits (677), Expect = 2e-69
 Identities = 124/169 (73%), Positives = 138/169 (81%)
 Frame = +1

Query: 157 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 336
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 337 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 516
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 517 YVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
           YVE+RRWQDIK PG VN DP     +LPP E GYPGGIFNP NF  + E
Sbjct: 149 YVEIRRWQDIKNPGCVNQDPIFKNYSLPPNECGYPGGIFNPLNFAATEE 197


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  262 bits (669), Expect = 2e-68
 Identities = 122/158 (77%), Positives = 135/158 (85%)
 Frame = +1

Query: 190 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 369
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 370 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 549
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 550 YPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
            PGSVN DP   + +LPP EVGYPGGIFNP NF  + E
Sbjct: 162 NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTAE 199


>tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 250

 Score =  261 bits (668), Expect = 2e-68
 Identities = 119/154 (77%), Positives = 134/154 (87%)
 Frame = +1

Query: 202 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 381
           +FKVEAKKGEWLPGL SP YL+G+LAGDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLG
Sbjct: 45  SFKVEAKKGEWLPGLTSPTYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 382 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 561
           VAGML+P++ T IG++NVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 105 VAGMLLPEVFTSIGLLNVPKWYDAGKSDYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 164

Query: 562 VNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
           VN DP     +LPP EVGYPGGIFNP NF  +LE
Sbjct: 165 VNQDPIFKSYSLPPNEVGYPGGIFNPLNFAPTLE 198


>tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 251

 Score =  259 bits (662), Expect = 1e-67
 Identities = 118/154 (76%), Positives = 133/154 (86%)
 Frame = +1

Query: 202 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 381
           +FKVEAKKGEWLPGL SP+YL+G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLG
Sbjct: 45  SFKVEAKKGEWLPGLPSPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 382 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 561
           VAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK PG 
Sbjct: 105 VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGC 164

Query: 562 VNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLE 663
           VN DP   + +LPP E GYPGGIFNP NF  ++E
Sbjct: 165 VNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIE 198