DK961750 |
Clone id |
TST39A01NGRL0011_A05 |
Library |
TST39 |
Length |
683 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_A05. 5' end sequence. |
Accession |
DK961750 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1529Contig1 |
Sequence |
TAGCTCCATCCTCGCAGCTTTCAACTTCAAACGAGCTCCCACTCGCATCCGCACCCCTCA GCTTTTATGCTAATTGGGTAGTCATGGGAGCTTCAGAGCCCGTTTCGCTACAAAACCTCA AGTATTACAACTGCAAAATGGAGGAGGGCAAAGAAGGCAGCGATGGAAAACCCTCCGTGG GACCTGTTTACAGAAGTATACTCTCCAAGGATGGGTTCCCACCTCCTCCCCCAGGAATTG ACACTTGCTGGGACGTTTTCAGCGTGTCAGTCAAAAGGAATCCAGACAACAAGTTGCTAG GTTGGCGCAAAGTCGCTGATGGGAAGGCGGGCCCGTATTCGTGGCTAACGTACCAGCAAG TGTACGATCAGGCAATTAAAATTGGCTCAGCAATGCGTACTTGTGGCATAAAGCCTATGG ACAAATGTGGTGTGTATGGAGGAAATTGCCCAGAGTGGGCTATATCAATGGAGGCTTGCA ATGGACATTCTATTTCTTGTGTTCCCCTTTATGACACTTTAGGAGCAAATGCAATTGAAT TTATCATCAAGCATGCAGAGATTCCGATTGCTTTTGTTCAAGAGGCAAAACTTCCAGAGA TTCTGATATCTTTGCCAAACTGCTCGGAGTTTCTGAAAATTGTGGTTAGCTTTGGCTCGG TGACAGAGCAACAAAAGAGTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55DR6 |
Definition |
sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase OS=Dictyostelium discoideum |
Align length |
138 |
Score (bit) |
98.6 |
E-value |
3.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961750|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_A05, 5' (683 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase OS=Dictyostelium ... 99 3e-20 sp|Q9JID6|ACSL1_CAVPO Long-chain-fatty-acid--CoA ligase 1 OS=Cav... 89 3e-17 sp|P41216|ACSL1_MOUSE Long-chain-fatty-acid--CoA ligase 1 OS=Mus... 85 4e-16 sp|P18163|ACSL1_RAT Long-chain-fatty-acid--CoA ligase 1 OS=Rattu... 83 2e-15 sp|O88813|ACSL5_RAT Long-chain-fatty-acid--CoA ligase 5 OS=Rattu... 82 3e-15 sp|Q8JZR0|ACSL5_MOUSE Long-chain-fatty-acid--CoA ligase 5 OS=Mus... 79 3e-14 sp|P33121|ACSL1_HUMAN Long-chain-fatty-acid--CoA ligase 1 OS=Hom... 79 3e-14 sp|Q9ULC5|ACSL5_HUMAN Long-chain-fatty-acid--CoA ligase 5 OS=Hom... 76 1e-13 sp|Q9UKU0|ACSL6_HUMAN Long-chain-fatty-acid--CoA ligase 6 OS=Hom... 74 9e-13 sp|Q91WC3|ACSL6_MOUSE Long-chain-fatty-acid--CoA ligase 6 OS=Mus... 72 4e-12 sp|P33124|ACSL6_RAT Long-chain-fatty-acid--CoA ligase 6 OS=Rattu... 71 6e-12 sp|Q63151|ACSL3_RAT Long-chain-fatty-acid--CoA ligase 3 OS=Rattu... 70 8e-12 sp|Q5R668|ACSL3_PONAB Long-chain-fatty-acid--CoA ligase 3 OS=Pon... 70 1e-11 sp|O95573|ACSL3_HUMAN Long-chain-fatty-acid--CoA ligase 3 OS=Hom... 70 1e-11 sp|Q9CZW4|ACSL3_MOUSE Long-chain-fatty-acid--CoA ligase 3 OS=Mus... 70 1e-11 sp|O60135|LCF1_SCHPO Long-chain-fatty-acid--CoA ligase 1 OS=Schi... 63 2e-09 sp|P39518|LCF2_YEAST Long-chain-fatty-acid--CoA ligase 2 OS=Sacc... 60 1e-08 sp|Q9P7D7|LCF2_SCHPO Long-chain-fatty-acid--CoA ligase 2 OS=Schi... 59 2e-08 sp|Q9QUJ7|ACSL4_MOUSE Long-chain-fatty-acid--CoA ligase 4 OS=Mus... 57 9e-08 sp|O60488|ACSL4_HUMAN Long-chain-fatty-acid--CoA ligase 4 OS=Hom... 56 2e-07 sp|O35547|ACSL4_RAT Long-chain-fatty-acid--CoA ligase 4 OS=Rattu... 56 2e-07 sp|A1L1K7|ACBG2_RAT Long-chain-fatty-acid--CoA ligase ACSBG2 OS=... 50 1e-05 sp|Q5FVE4|ACBG2_HUMAN Long-chain-fatty-acid--CoA ligase ACSBG2 O... 50 1e-05 sp|Q2XU92|ACBG2_MOUSE Long-chain-fatty-acid--CoA ligase ACSBG2 O... 50 1e-05 sp|P44446|LCFH_HAEIN Putative long-chain-fatty-acid--CoA ligase ... 46 2e-04 sp|P30624|LCF1_YEAST Long-chain-fatty-acid--CoA ligase 1 OS=Sacc... 46 2e-04 sp|Q8KBY0|ACSA_CHLTE Acetyl-coenzyme A synthetase OS=Chlorobium ... 45 4e-04 sp|Q8DKH2|ACSA_THEEB Acetyl-coenzyme A synthetase OS=Thermosynec... 44 8e-04 sp|P0C064|GRSB_BREBE Gramicidin S synthetase 2 OS=Brevibacillus ... 42 0.002 sp|Q9V3S9|BGM_DROME Very long-chain-fatty-acid--CoA ligase bubbl... 42 0.004
>sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1 Length = 667
Score = 98.6 bits (244), Expect = 3e-20 Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 1/138 (0%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKV-ADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIKPM 419 T +DV+ ++ ++ D+ LG R++ ADGK G Y W++Y+Q +A IGSA+ G+ Sbjct: 55 TLYDVYRIN--KDSDSNFLGIRELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKG 112
Query: 420 DKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLPE 599 D+ G++ N PEW +S A HS+ V LY TLGANAIE+++ H+EI + + E K E Sbjct: 113 DRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISV-LLCEGKNVE 171
Query: 600 ILISLPNCSEFLKIVVSF 653 ++S+P + +K +VS+ Sbjct: 172 KILSMPGTT--IKTIVSY 187
>sp|Q9JID6|ACSL1_CAVPO Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1 Length = 698
Score = 88.6 bits (218), Expect = 3e-17 Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 7/153 (4%) Frame = +3
Query: 237 IDTCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIK- 413 + T +DVF ++ + + LG RK PY WL+Y+QV D + IGSA+ G + Sbjct: 89 VRTLYDVFQRGIQVSNNGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQA 144
Query: 414 -PMDKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAK 590 P G++ N PEW I +AC +S+ VPLYDTLGA+AI +I+ AE+ + F + + Sbjct: 145 SPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPE 204
Query: 591 LPEILI-SLPN-CSEFLKIVV---SFGSVTEQQ 674 IL+ S+ N + LKI+V S+GS +Q Sbjct: 205 KARILLESVENKLTPGLKIIVVMDSYGSELVEQ 237
>sp|P41216|ACSL1_MOUSE Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1 Length = 699
Score = 84.7 bits (208), Expect = 4e-16 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%) Frame = +3
Query: 237 IDTCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIKP 416 + T +D F ++ + + LG RK PY W++Y++V + A IGS + G KP Sbjct: 90 VRTMYDGFQRGIQVSNNGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKP 145
Query: 417 MDK--CGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAK 590 + G++ N PEW I + C +S+ VPLYDTLGA+AI +I+ AE+ + F + + Sbjct: 146 CSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPE 205
Query: 591 LPEILI-----SLPNCSEFLKIVVSFGS 659 ++L+ L C + + I+ S+GS Sbjct: 206 KAKLLLEGVENKLTPCLKIIVIMDSYGS 233
>sp|P18163|ACSL1_RAT Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1 Length = 699
Score = 82.8 bits (203), Expect = 2e-15 Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 7/146 (4%) Frame = +3
Query: 237 IDTCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIKP 416 + T +D F ++ + D LG RK PY W++Y+QV + A IGSA+ G KP Sbjct: 90 VRTMYDGFQRGIQVSNDGPCLGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKP 145
Query: 417 MDK--CGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAK 590 + G++ N PEW + C +S+ VPLYDTLG +AI +I+ AE+ + F + + Sbjct: 146 CSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPE 205
Query: 591 LPEILI-----SLPNCSEFLKIVVSF 653 ++L+ L C + + I+ S+ Sbjct: 206 KAKLLLEGVENKLTPCLKIIVIMDSY 231
>sp|O88813|ACSL5_RAT Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1 Length = 683
Score = 82.0 bits (201), Expect = 3e-15 Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIKPMD 422 T ++VF + + + LG+RK PY W++Y+QV D+A +GS + G KP Sbjct: 76 TLYEVFQRGLAVSDNGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKPSQ 131
Query: 423 K--CGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLP 596 G++ N PEW IS AC +S+ VPLYDTLGA AI ++I A+I + + Sbjct: 132 DQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKA 191
Query: 597 EILI 608 +LI Sbjct: 192 TMLI 195
>sp|Q8JZR0|ACSL5_MOUSE Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1 Length = 683
Score = 78.6 bits (192), Expect = 3e-14 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIKPMD 422 T ++ F + + + LG+RK PY W++Y+QV D+A +GS + G K Sbjct: 76 TLYENFQRGLAVSDNGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKSSQ 131
Query: 423 K--CGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLP 596 G++ N PEW IS AC +S+ VPLYDTLG AI F+I A+IP+ + Sbjct: 132 DQFVGIFAQNRPEWVISELACYTYSMVAVPLYDTLGTEAIIFVINRADIPVVICDTPQKA 191
Query: 597 EILI 608 +L+ Sbjct: 192 TMLV 195
>sp|P33121|ACSL1_HUMAN Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1 Length = 698
Score = 78.6 bits (192), Expect = 3e-14 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%) Frame = +3
Query: 237 IDTCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIK- 413 + T ++ F ++ + + LG RK PY WL+Y+QV + + IGSA+ G K Sbjct: 89 VTTLYEGFQRGIQVSNNGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKT 144
Query: 414 -PMDKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAK 590 P G++ N PEW I + C +S+ VPLYDTLG AI +I+ AE+ + FV + + Sbjct: 145 APDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPE 204
Query: 591 LPEILI 608 ++L+ Sbjct: 205 KAKLLL 210
>sp|Q9ULC5|ACSL5_HUMAN Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=2 SV=1 Length = 683
Score = 76.3 bits (186), Expect = 1e-13 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAMRTCGIK--P 416 T ++VF + + + LG+RK PY WL+Y+QV D+A +GS + G K P Sbjct: 76 TMYEVFQRGLAVSDNGPCLGYRKPNQ----PYRWLSYKQVSDRAEYLGSCLLHKGYKSSP 131
Query: 417 MDKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLP 596 G++ N PEW IS AC +S+ VPLYDTLG AI I+ A+I + + Sbjct: 132 DQFVGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEAIVHIVNKADIAMVICDTPQKA 191
Query: 597 EILI 608 +LI Sbjct: 192 LVLI 195
>sp|Q9UKU0|ACSL6_HUMAN Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4 Length = 697
Score = 73.6 bits (179), Expect = 9e-13 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 2/124 (1%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAM--RTCGIKP 416 T + VF + + + LG+RK PY WL+YQ+V D+A +GS + C Sbjct: 91 TMYQVFRRGLSISGNGPCLGFRKPKQ----PYQWLSYQEVADRAEFLGSGLLQHNCKACT 146
Query: 417 MDKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLP 596 GV+ N PEW I AC +S+ VPLYDTLG AI +II A+I V + + Sbjct: 147 DQFIGVFAQNRPEWIIVELACYTYSMVVVPLYDTLGPGAIRYIINTADISTVIVDKPQKA 206
Query: 597 EILI 608 +L+ Sbjct: 207 VLLL 210
>sp|Q91WC3|ACSL6_MOUSE Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1 Length = 697
Score = 71.6 bits (174), Expect = 4e-12 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 2/124 (1%) Frame = +3
Query: 243 TCWDVFSVSVKRNPDNKLLGWRKVADGKAGPYSWLTYQQVYDQAIKIGSAM--RTCGIKP 416 T + VF + + + LG+RK PY WL+YQ+V +A +GS + C + Sbjct: 91 TMYQVFRRGLSISGNGPCLGFRKPEQ----PYQWLSYQEVAKRAEFLGSGLLQHDCKVGT 146
Query: 417 MDKCGVYGGNCPEWAISMEACNGHSISCVPLYDTLGANAIEFIIKHAEIPIAFVQEAKLP 596 GV+ N PEW I+ AC +S+ VPLYDTLG +I +II A+I V + Sbjct: 147 EQFVGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSISYIINTADICTVIVDKPHKA 206
Query: 597 EILI 608 +L+ Sbjct: 207 TLLL 210
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B5LAV6 |
Definition |
tr|B5LAV6|B5LAV6_CAPAN Putative long-chain acyl-CoA synthetase OS=Capsicum annuum |
Align length |
183 |
Score (bit) |
256.0 |
E-value |
1.0e-66 |
Report |
|