DK961753 |
Clone id |
TST39A01NGRL0011_A08 |
Library |
TST39 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_A08. 5' end sequence. |
Accession |
DK961753 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
GGTTGAAGCTGTGAGGCACGTGCGCTCTGTACTTGGTGAAATCAGGAGGCTTCAAAGCCT TGATGATGATGAAGTTTTTACGTTTGCAAAGGAAATTGCCGCCCCTTATGAGCTTGTGAG GCAAACTAAGCAACTTGGGCGCCTTCCAGTGGTAAATTTTGCAGCCGGTGGTGTTGCAAC TCCTGCTGACGCAGCTATGATGATGCAGCTTGGGTGTGACGGTGTGTTTGTTGGGTCTGG TATCTTCAAAAGTGGCAACCCCTCTCAGCGTGCTCGAGCCATAGTTTCTGCTGTGACTCA CTTCAATGACCCTAGCATTATAGCAGATGTCAGCTGCGGTTTGGGTGAAGCTATGGTGGG TATCAATCTTTTTTTTTAGAAAGTTGAGCGCTTTGCTGCAAGGTCTGATTAAAGAGGAGA ATGGATTCGTACAAATGCTGTATGTGTTGTGTGTCACTACGGGTGAGGCATCCGAGGCTT GTGTTCAAGCCCTTGTTGTTCAGCAAGTTGTTATGGTAGATAGTACTTTAGTTCACTTAG AACTCTTTGTCTGATTGCCTTTGGTTATTGGCAGTGCTGGTAGACCATTTAACGGAACCA TTCATTCTCACTCCAGCAGAACCTGAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
136 |
Score (bit) |
203.0 |
E-value |
5.0e-52 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIQ8 |
Definition |
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
136 |
Score (bit) |
201.0 |
E-value |
2.0e-50 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961753|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_A08, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 201 2e-50 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 199 1e-49 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 199 1e-49 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 197 4e-49 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 192 1e-47 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 192 1e-47 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 192 1e-47 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 192 2e-47 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 192 2e-47 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 192 2e-47 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 191 2e-47 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 190 7e-47 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 188 2e-46 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 187 3e-46 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 187 6e-46 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 186 1e-45 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 186 1e-45 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 171 3e-41 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 168 2e-40 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 166 1e-39 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 164 3e-39 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 161 3e-38 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 160 8e-38 tr|Q2RMJ0|Q2RMJ0_MOOTA Vitamin B6 biosynthesis protein OS=Moorel... 157 5e-37 tr|A9B891|A9B891_HERA2 Pyridoxine biosynthesis protein OS=Herpet... 155 2e-36 tr|B6JV77|B6JV77_SCHJP Pyridoxal biosynthesis lyase pdxS OS=Schi... 152 1e-35 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 150 6e-35 tr|A1HUH0|A1HUH0_9FIRM Pyridoxine biosynthesis protein OS=Thermo... 150 8e-35 tr|B1I157|B1I157_DESAP Pyridoxine biosynthesis protein OS=Desulf... 149 1e-34 tr|Q5K9Z1|Q5K9Z1_CRYNE Putative uncharacterized protein OS=Crypt... 149 2e-34
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 201 bits (512), Expect = 2e-50 Identities = 105/136 (77%), Positives = 115/136 (84%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRH RSVLGEIRRLQSLDDDEVF+FAKEIAAPYELVRQTKQLGRLPVVNF Sbjct: 180 VEAVRHTRSVLGEIRRLQSLDDDEVFSFAKEIAAPYELVRQTKQLGRLPVVNFAAGGVAT 239
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGEAMVG Sbjct: 240 PADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDAHVLAEVSENLGEAMVG 299
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 300 INLSNKKVERFAARSE 315
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 199 bits (506), Expect = 1e-49 Identities = 104/136 (76%), Positives = 113/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRH RSVLG+IRRLQSLDDDEVFTFAKEI APYELVRQTKQLGRLPVVNF Sbjct: 179 VEAVRHTRSVLGDIRRLQSLDDDEVFTFAKEIQAPYELVRQTKQLGRLPVVNFAAGGVAT 238
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ D ++ADVS LGEAMVG Sbjct: 239 PADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYRDAHVLADVSENLGEAMVG 298
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 299 INLSDKKVERFAARSE 314
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 199 bits (505), Expect = 1e-49 Identities = 103/136 (75%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRH RSVLG+IRRLQSLDDDEVFT+AKEI APYELVRQTKQLGRLPVVNF Sbjct: 178 VEAVRHTRSVLGDIRRLQSLDDDEVFTYAKEIQAPYELVRQTKQLGRLPVVNFAAGGVAT 237
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+VS LGEAMVG Sbjct: 238 PADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDARVLAEVSENLGEAMVG 297
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 298 INLSDKKVERFAARSE 313
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 197 bits (501), Expect = 4e-49 Identities = 103/136 (75%), Positives = 113/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRH RSVLGEIRRLQSLDDDEVFTFAK+IAAPYELVRQTKQLGRLPVVNF Sbjct: 180 VEAVRHTRSVLGEIRRLQSLDDDEVFTFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVAT 239
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P +R RAIV AVTH+ND ++A++S LGEAMVG Sbjct: 240 PADAALMMQLGCDGVFVGSGIFKSGDPVKRGRAIVEAVTHYNDAHMLAEMSENLGEAMVG 299
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 300 INLSDKKVERFAARSE 315
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 192 bits (489), Expect = 1e-47 Identities = 96/136 (70%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 +EAVRHVRSV+ +IR L+++DDDEVFTFAK IAAPY+LV QTKQLGRLPVV+F Sbjct: 176 IEAVRHVRSVMSDIRVLRNMDDDEVFTFAKNIAAPYDLVMQTKQLGRLPVVHFAAGGVAT 235
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVG Sbjct: 236 PADAALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVG 295
Query: 362 INLFF*KVERFAARSD 409 INL KVERFA RS+ Sbjct: 296 INLTDDKVERFANRSE 311
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 192 bits (489), Expect = 1e-47 Identities = 97/136 (71%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRHVRSV+G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F Sbjct: 182 VEAVRHVRSVMGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVAT 241
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVG Sbjct: 242 PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVG 301
Query: 362 INLFF*KVERFAARSD 409 INL KVER+AARS+ Sbjct: 302 INLNDPKVERYAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 192 bits (489), Expect = 1e-47 Identities = 97/136 (71%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRHVRSV+G++R L+S+DDDEVF +AK IAAPY+LV QTKQLGRLPVV F Sbjct: 245 VEAVRHVRSVMGDVRALRSMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVAT 304
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVG Sbjct: 305 PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVG 364
Query: 362 INLFF*KVERFAARSD 409 INL KVER+AARS+ Sbjct: 365 INLNDPKVERYAARSE 380
>tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 318
Score = 192 bits (487), Expect = 2e-47 Identities = 97/136 (71%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRHVRSV+G+IR L+++DDDEVF++AK IAAPY+LV QTKQLGRLPVV F Sbjct: 183 VEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVAT 242
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVG Sbjct: 243 PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVG 302
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 303 INLSDPKVERFAARSE 318
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 192 bits (487), Expect = 2e-47 Identities = 94/136 (69%), Positives = 116/136 (85%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRHVRSV+GEIR L+++DDDEVFT+AK+++APY+LV QTKQLGRLPVV+F Sbjct: 62 VEAVRHVRSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVAT 121
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A+VSCGLGEAMVG Sbjct: 122 PADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVG 181
Query: 362 INLFF*KVERFAARSD 409 INL KVER+A RS+ Sbjct: 182 INLNDDKVERYANRSE 197
>tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021866 PE=4 SV=1 Length = 298
Score = 192 bits (487), Expect = 2e-47 Identities = 97/136 (71%), Positives = 114/136 (83%) Frame = +2
Query: 2 VEAVRHVRSVLGEIRRLQSLDDDEVFTFAKEIAAPYELVRQTKQLGRLPVVNFXXXXXXX 181 VEAVRHVRSV+G+IR L+++DDDEVF++AK IAAPY+LV QTKQLGRLPVV F Sbjct: 163 VEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVAT 222
Query: 182 XXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVG 361 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVG Sbjct: 223 PADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVG 282
Query: 362 INLFF*KVERFAARSD 409 INL KVERFAARS+ Sbjct: 283 INLSDPKVERFAARSE 298
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