DK961761 |
Clone id |
TST39A01NGRL0011_A19 |
Library |
TST39 |
Length |
705 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_A19. 5' end sequence. |
Accession |
DK961761 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL31Contig1 |
Sequence |
GGTGAAGGCACGCTCTAACAACGTGAAGCCATGGCGCGCGGTCTCAAGAAACATCTGAAA CGTCTCAATGCCCCGAGGCACTGGATGCTTGACAAGCTCGGTGGTGCCTTTGCGCCCAAG CCCTCTGCCGGACCCCATAAGACCAGGGAATGTCTGCCGATGGTTGTCTTGTTGAGGAAT CGGCTGAAGTATGCCTTGACCTATCGTGAAGTGGTTGCCATTGTGATGCAGCGACTCATC TCTGTGGATGGGAAAGTAAGGACGGACAAGTGTTACCCTGCTGGGTTTATGGATGTTGTG TCCATAGCAAAAACCGGAGAGAACTTCCGGTTGCTTTATGATAGCAAAGGAAGATTCACC TTGCACTCCATAAGCCTTGAAGAGGCTAAGTACAAGCTATGCAAGGTCCGAGCTGCCTGC TGCGGCGAGAAGGGGATTCCCTACATCACTACATTTGATGGGCGCACCATTCGCTATCCA GATCCCCTTATCAAGGCCAATGACACCATTAAAATTGAAATTGAGACTGGAAAGGTTGTA GAGTTCATCAAGTTTGACATTGGCAACATTGTTATGGTTACTGGAGGTCGAAACAGAGGC AGAATTGGGATTCTCAAGCACCGTGAAAAGCATAAGGGAAGTTTTGAAATTGTGCACGTA CAAGATGCTGCTGGTCAAGAGTTTGCCACCCGGCTTGGCAATGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46299 |
Definition |
sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsutum |
Align length |
225 |
Score (bit) |
387.0 |
E-value |
1.0e-107 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961761|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_A19, 5' (705 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsut... 387 e-107 sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis t... 385 e-107 sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis t... 385 e-106 sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis t... 385 e-106 sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosu... 384 e-106 sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa sub... 380 e-105 sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4... 377 e-104 sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca... 359 9e-99 sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus puncta... 338 2e-92 sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus grise... 336 8e-92 sp|P79103|RS4_BOVIN 40S ribosomal protein S4 OS=Bos taurus GN=RP... 335 1e-91 sp|P62703|RS4X_RAT 40S ribosomal protein S4, X isoform OS=Rattus... 335 1e-91 sp|P62702|RS4X_MOUSE 40S ribosomal protein S4, X isoform OS=Mus ... 335 1e-91 sp|P62704|RS4X_MESAU 40S ribosomal protein S4, X isoform OS=Meso... 335 1e-91 sp|Q76MY1|RS4X_MACFU 40S ribosomal protein S4, X isoform OS=Maca... 335 1e-91 sp|P62701|RS4X_HUMAN 40S ribosomal protein S4, X isoform OS=Homo... 335 1e-91 sp|P62705|RS4X_FELCA 40S ribosomal protein S4, X isoform OS=Feli... 335 1e-91 sp|Q76N24|RS4X_CERAE 40S ribosomal protein S4, X isoform OS=Cerc... 335 1e-91 sp|Q6PBC4|RS4_XENTR 40S ribosomal protein S4 OS=Xenopus tropical... 335 2e-91 sp|P49401|RS4_XENLA 40S ribosomal protein S4 OS=Xenopus laevis G... 334 2e-91 sp|P47836|RS4_CHICK 40S ribosomal protein S4 OS=Gallus gallus GN... 334 2e-91 sp|Q642H9|RS4X_DANRE 40S ribosomal protein S4, X isoform OS=Dani... 333 4e-91 sp|O62739|RS4Y1_MONDO 40S ribosomal protein S4, Y isoform 1 OS=M... 332 1e-90 sp|O62738|RS4X_MONDO 40S ribosomal protein S4, X isoform OS=Mono... 332 1e-90 sp|Q9USW5|RS4B_SCHPO 40S ribosomal protein S4-B OS=Schizosacchar... 331 3e-90 sp|P87158|RS4A_SCHPO 40S ribosomal protein S4-A OS=Schizosacchar... 331 3e-90 sp|Q9P4W9|RS4C_SCHPO 40S ribosomal protein S4-C OS=Schizosacchar... 330 4e-90 sp|Q5UAP0|RS4_BOMMO 40S ribosomal protein S4 OS=Bombyx mori GN=R... 330 5e-90 sp|Q4PMB3|RS4_IXOSC 40S ribosomal protein S4 OS=Ixodes scapulari... 328 1e-89 sp|Q95V34|RS4_SPOFR 40S ribosomal protein S4 OS=Spodoptera frugi... 328 2e-89
>sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1 Length = 262
Score = 387 bits (993), Expect = e-107 Identities = 178/225 (79%), Positives = 210/225 (93%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V+AI+MQR + VDGKVRTDK YPAGFMDVVSI KT E+FRLLYD+KGRF LH+I+ +E K Sbjct: 61 VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+ Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +HVQDAAG EFATRLGNV Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNV 225
>sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2 Length = 262
Score = 385 bits (990), Expect = e-107 Identities = 178/225 (79%), Positives = 207/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI EEAK Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E K+VEFIKFD+GN+ Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +H+QD+ G EFATRLGNV Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV 225
>sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4 Length = 262
Score = 385 bits (989), Expect = e-106 Identities = 178/225 (79%), Positives = 207/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI EEAK Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E K+VEFIKFD+GN+ Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +H+QD+ G EFATRLGNV Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV 225
>sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1 Length = 261
Score = 385 bits (989), Expect = e-106 Identities = 178/225 (79%), Positives = 207/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI EEAK Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E K+VEFIKFD+GN+ Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +H+QD+ G EFATRLGNV Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV 225
>sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1 Length = 264
Score = 384 bits (986), Expect = e-106 Identities = 175/225 (77%), Positives = 209/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR + VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHS+ EE+K Sbjct: 61 VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+ Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +H+QD+ G EFATRLGNV Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNV 225
>sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3 Length = 265
Score = 380 bits (975), Expect = e-105 Identities = 172/225 (76%), Positives = 208/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR + VDGKVRTDK YPAGFMDV+SI KTGEN+RLLYD+KGRF L S+ E+AK Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDP+IKANDTIKI++ET K+V+FIKFD+GN+ Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRN GR+G++K+REKHKGSFE +HV+DA G +FATRLGNV Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNV 225
>sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1 Length = 265
Score = 377 bits (969), Expect = e-104 Identities = 171/225 (76%), Positives = 207/225 (92%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V++I+MQR + VDGKVRTDK YPAGFMDV+SI KT EN+RLLYD+KGRF LH I E+AK Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPY+ T+DGRTIRYPDPLIKANDTIKI++ET K+V+FIKFD+GN+ Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRN GR+G++K+REKHKGSFE +HV+D+ G +FATR+GNV Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNV 225
>sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca GN=RPS4 PE=2 SV=1 Length = 261
Score = 359 bits (921), Expect = 9e-99 Identities = 170/225 (75%), Positives = 199/225 (88%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 VV+I+MQR I VDGK+ + DVVSI KT ENFRLLYD+KGRF LHSI EE+K Sbjct: 61 VVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 116
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 +KLCKVR+ G+KGIPYI T+DGRTIRYPDPLIKANDTIK+++ET K+ +FIKFD+GN+ Sbjct: 117 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNV 176
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 VMVTGGRNRGR+G++K+REKHKGSFE +HVQDA G EFATRLGNV Sbjct: 177 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNV 221
>sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus punctatus GN=rps4 PE=2 SV=3 Length = 263
Score = 338 bits (866), Expect = 2e-92 Identities = 157/225 (69%), Positives = 186/225 (82%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT E Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V I MQR I VDGKVRTD YPAGFMDV+SI KTGENFRL+YD KGRFT+H I+ EEAK Sbjct: 61 VKKICMQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 YKLCKV+ G KGIP++ T D RTIRYPDP+IKANDT++I++ETGK+ EFIKFD GN+ Sbjct: 121 YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNL 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 MVTGG N GRIG++ +RE+H GSF++VHV+D+ G FATRL N+ Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNI 225
>sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus griseus GN=RPS4 PE=2 SV=2 Length = 263
Score = 336 bits (861), Expect = 8e-92 Identities = 157/225 (69%), Positives = 185/225 (82%) Frame = +1
Query: 31 MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210 MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT E Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390 V I MQR I +DGKVRTD YPAGFMDV+SI KTGENFRL+YD+KGRF +H I+ EEAK Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120
Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570 YKLCKVR G KGIP++ T D RTIRYPDPLIK NDTI+I++ETGK+ +FIKFD GN+ Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 571 VMVTGGRNRGRIGILKHREKHKGSFEIVHVQDAAGQEFATRLGNV 705 MVTGG N GRIG++ +RE+H GSF++VHV+DA G FATRL N+ Sbjct: 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 225
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S0Q0 |
Definition |
tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
225 |
Score (bit) |
417.0 |
E-value |
1.0e-115 |
Report |
|