DK961775 |
Clone id |
TST39A01NGRL0011_B09 |
Library |
TST39 |
Length |
706 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_B09. 5' end sequence. |
Accession |
DK961775 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2706Contig1 |
Sequence |
CATACATCAAGGCAGAAGGTGCTGGGAAGAAGCAGTACAGGGAGGGGAGACGCTGAGGTC GGAAACATCGAGGACGTGAAAGTCGAATATTCTCACAAGATCCCCCCTCGCTCTCGCTCT CTCTCTGCGCTCTGCTAGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGTT TGTGGCTCTAGCATCTAGCGGCGATCCTCTCCCGCTTCATCGGAGCTGCATTGGCTCTTT ATCTTTTTGAAATTTCAACGTCAATTTGAACACCCAAGACTCCCGCAGAAGACCCATTAC ACCCTATCCTCTGCGTCAAGGGTATGGCTGACATCAAAGAAGAGTCAGATTCAGCTGTGG TGAACCCTCCTAGAGTAGGCATCGGTGTGGGAACTGGACTCAGTGGTCTTCTTGCCTTGA AGTGGGCTCTTGAGAGGATTGTCCCTCCCGACAGTTCGGTCCACCTCCTCCATGTGCAGT CACCGCTGCGCTATATCCCGTATGCAATGGGAGGCAAATTTCCCGTCGAGAAGGCCAATC GCGAGACAGTGAAGAGGTTCAAAGAAGATATTCGTTTGGAGAAAGAAAACCTATTGAATA ATTATAGACAGCTGTGCGACAAGAGGAAGGTCAAGCATACAGTGTGTTATTCAGAAAATG ATTCAGTCCAGAAAGGGCTAGTGGATCAGATTATGAAACTTGGCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GUH1 |
Definition |
sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana |
Align length |
96 |
Score (bit) |
58.2 |
E-value |
4.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PZH0 |
Definition |
tr|A7PZH0|A7PZH0_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
126 |
Score (bit) |
65.1 |
E-value |
4.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961775|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_B09, 5' (706 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PZH0|A7PZH0_VITVI Chromosome chr15 scaffold_40, whole genom... 65 4e-09 tr|Q0DEQ5|Q0DEQ5_ORYSJ Os06g0140800 protein OS=Oryza sativa subs... 65 6e-09 tr|B8B2B7|B8B2B7_ORYSI Putative uncharacterized protein OS=Oryza... 65 6e-09 tr|A5AUS0|A5AUS0_VITVI Putative uncharacterized protein OS=Vitis... 65 6e-09 tr|A3B890|A3B890_ORYSJ Putative uncharacterized protein OS=Oryza... 65 6e-09 tr|Q84JS4|Q84JS4_ARATH Putative uncharacterized protein At5g4774... 64 7e-09 tr|A1YKF2|A1YKF2_BRASY Serine threonine kinase OS=Brachypodium s... 63 2e-08 tr|A7NZ20|A7NZ20_VITVI Chromosome chr6 scaffold_3, whole genome ... 60 2e-07 tr|A2X832|A2X832_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|Q3E8A3|Q3E8A3_ARATH Uncharacterized protein At5g57035.1 OS=Ar... 56 2e-06 tr|B4FHY3|B4FHY3_MAIZE Putative uncharacterized protein OS=Zea m... 56 2e-06 tr|Q94LU6|Q94LU6_ORYSJ Putative receptor kinase OS=Oryza sativa ... 56 3e-06 tr|Q336U5|Q336U5_ORYSJ Os10g0548700 protein OS=Oryza sativa subs... 56 3e-06 tr|B8BI46|B8BI46_ORYSI Putative uncharacterized protein OS=Oryza... 56 3e-06 tr|A3C726|A3C726_ORYSJ Putative uncharacterized protein OS=Oryza... 56 3e-06 tr|A3A9X0|A3A9X0_ORYSJ Putative uncharacterized protein OS=Oryza... 56 3e-06 tr|A7Q5A1|A7Q5A1_VITVI Chromosome undetermined scaffold_52, whol... 54 7e-06 tr|A5BVE4|A5BVE4_VITVI Putative uncharacterized protein OS=Vitis... 54 7e-06 tr|A7PCT1|A7PCT1_VITVI Chromosome chr17 scaffold_12, whole genom... 54 1e-05 tr|Q0DW23|Q0DW23_ORYSJ Os03g0101200 protein OS=Oryza sativa subs... 53 2e-05 tr|A5BC94|A5BC94_VITVI Putative uncharacterized protein OS=Vitis... 53 2e-05 tr|A2XBG2|A2XBG2_ORYSI Putative uncharacterized protein OS=Oryza... 53 2e-05 tr|A7R510|A7R510_VITVI Chromosome undetermined scaffold_831, who... 52 3e-05 tr|Q10T52|Q10T52_ORYSJ U-box domain containing protein, expresse... 52 4e-05 tr|A7PFC9|A7PFC9_VITVI Chromosome chr11 scaffold_14, whole genom... 50 1e-04 tr|A5C5X6|A5C5X6_VITVI Putative uncharacterized protein OS=Vitis... 50 1e-04 tr|Q9M323|Q9M323_ARATH Putative uncharacterized protein F2A19.10... 46 0.003 tr|Q6Z5V6|Q6Z5V6_ORYSJ Putative leucine zipper-containing protei... 46 0.003 tr|Q652P0|Q652P0_ORYSJ Putative uncharacterized protein OJ1003_C... 46 0.003 tr|Q5XV96|Q5XV96_ARATH Putative uncharacterized protein OS=Arabi... 46 0.003
>tr|A7PZH0|A7PZH0_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026876001 PE=4 SV=1 Length = 849
Score = 65.1 bits (157), Expect = 4e-09 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Frame = +3
Query: 330 DIKEESDSAVVNPPRVGIGVGTGLSGLLA-LKWALERIVPPDSSVHLLHVQSPLRYIPYA 506 +I EE A+V ++ + VG + + L WAL+ + ++HV P + IP Sbjct: 33 EIVEEQPLALVVEDKIFVAVGKEVKESKSILVWALQN--SGGKRISIVHVHQPAQMIPI- 89
Query: 507 MGGKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVD 686 MGGKFP K + VK +++ R + +LN+Y +C K V+ Y E+++V+KG+++ Sbjct: 90 MGGKFPASKLKEQEVKAYRDLERQDMHKILNDYLLICRKAGVRAEKLYIESENVEKGILE 149
Query: 687 QIMKLG 704 I + G Sbjct: 150 LISEHG 155
>tr|Q0DEQ5|Q0DEQ5_ORYSJ Os06g0140800 protein OS=Oryza sativa subsp. japonica GN=Os06g0140800 PE=2 SV=1 Length = 806
Score = 64.7 bits (156), Expect = 6e-09 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Frame = +3
Query: 336 KEESDSAVVNPPRVGIGVGTGLSGLLALKWALERIVPPDSSV-HLLHVQSPLRYIPYAMG 512 ++E + + V I V + ALKWAL++ VP + +LHV+ ++ +P MG Sbjct: 11 EDELEMEAPSVSTVAIAVNGSRNSKHALKWALDKFVPEGKVLFQILHVRPTIKMVPTPMG 70
Query: 513 GKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVDQI 692 P+ + + +K+++ + N+L Y+++C +RKV+ E+D V + ++I Sbjct: 71 NFIPITQVREDVATAYKKEVEWQANNMLLPYKKMCAQRKVEAEAVLLESDDVPTAISEEI 130
Query: 693 MK 698 K Sbjct: 131 SK 132
>tr|B8B2B7|B8B2B7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21572 PE=4 SV=1 Length = 806
Score = 64.7 bits (156), Expect = 6e-09 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Frame = +3
Query: 336 KEESDSAVVNPPRVGIGVGTGLSGLLALKWALERIVPPDSSV-HLLHVQSPLRYIPYAMG 512 ++E + + V I V + ALKWAL++ VP + +LHV+ ++ +P MG Sbjct: 11 EDELEMEAPSVSTVAIAVNGSRNSKHALKWALDKFVPEGKVLFQILHVRPTIKMVPTPMG 70
Query: 513 GKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVDQI 692 P+ + + +K+++ + N+L Y+++C +RKV+ E+D V + ++I Sbjct: 71 NFIPITQVREDVATAYKKEVEWQANNMLLPYKKMCAQRKVEAEAVLLESDDVPTAISEEI 130
Query: 693 MK 698 K Sbjct: 131 SK 132
>tr|A5AUS0|A5AUS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015820 PE=4 SV=1 Length = 881
Score = 64.7 bits (156), Expect = 6e-09 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Frame = +3
Query: 330 DIKEESDSAVVNPPRVGIGVGTGLSGLLA-LKWALERIVPPDSSVHLLHVQSPLRYIPYA 506 +I EE A+V ++ + VG + + L WAL+ + ++HV P + IP Sbjct: 33 EIVEEQPLALVVEDKIFVAVGKEVKESKSILVWALQN--SGGKRISIVHVHQPAQMIPI- 89
Query: 507 MGGKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVD 686 MGGKFP K + VK +++ R + +LN+Y +C K V+ Y E+++V+KG+++ Sbjct: 90 MGGKFPASKLKEQEVKAYRDLERQDMHKILNDYILICRKAGVRAEKLYIESENVEKGILE 149
Query: 687 QIMKLG 704 I + G Sbjct: 150 LISEHG 155
>tr|A3B890|A3B890_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019262 PE=4 SV=1 Length = 785
Score = 64.7 bits (156), Expect = 6e-09 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Frame = +3
Query: 336 KEESDSAVVNPPRVGIGVGTGLSGLLALKWALERIVPPDSSV-HLLHVQSPLRYIPYAMG 512 ++E + + V I V + ALKWAL++ VP + +LHV+ ++ +P MG Sbjct: 11 EDELEMEAPSVSTVAIAVNGSRNSKHALKWALDKFVPEGKVLFQILHVRPTIKMVPTPMG 70
Query: 513 GKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVDQI 692 P+ + + +K+++ + N+L Y+++C +RKV+ E+D V + ++I Sbjct: 71 NFIPITQVREDVATAYKKEVEWQANNMLLPYKKMCAQRKVEAEAVLLESDDVPTAISEEI 130
Query: 693 MK 698 K Sbjct: 131 SK 132
>tr|Q84JS4|Q84JS4_ARATH Putative uncharacterized protein At5g47740 OS=Arabidopsis thaliana GN=At5g47740 PE=2 SV=1 Length = 244
Score = 64.3 bits (155), Expect = 7e-09 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Frame = +3
Query: 375 VGIGVGTGLSGLLALKWALERIVPPDSSV-HLLHVQSPLRYIPYAMGGKFPVEKANRETV 551 V +GVG G S + AL+WA++ ++ S++ L+HV R+IPY +G + E+A++E V Sbjct: 45 VYVGVGKGDSSMEALRWAIDNLMTSSSTLLFLIHVFPETRFIPYPLG-RITRERASQEQV 103
Query: 552 KRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVDQI 692 + F R ++ LL + C KVK E+DSV K + D I Sbjct: 104 ESFMSQEREKRRTLLLKFLHACSASKVKVETILVESDSVAKAVQDLI 150
>tr|A1YKF2|A1YKF2_BRASY Serine threonine kinase OS=Brachypodium sylvaticum GN=57h21.16 PE=4 SV=1 Length = 829
Score = 62.8 bits (151), Expect = 2e-08 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 5/125 (4%) Frame = +3
Query: 339 EESDSAV----VNPPRVGIGVGTGLSGLLALKWALERIVPPDSSV-HLLHVQSPLRYIPY 503 EE D+ + V I V S ALKWAL++ VP + +LHV+ P+ +P Sbjct: 4 EEDDAGIGGEAAGVSTVAIAVSGSKSSRHALKWALDKFVPGGKVLFRILHVRPPITMVPT 63
Query: 504 AMGGKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLV 683 MG P+ + + ++E++ + N+L ++++C +R+V+ E++ V + Sbjct: 64 PMGNFIPISQVREDVASAYREELEWQARNMLLPFKKMCAQRQVEAEAVLIESNDVPSAIS 123
Query: 684 DQIMK 698 ++I K Sbjct: 124 EEIDK 128
>tr|A7NZ20|A7NZ20_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024341001 PE=3 SV=1 Length = 820
Score = 59.7 bits (143), Expect = 2e-07 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Frame = +3
Query: 372 RVGIGVGTGLSGLLAL-KWALERIVPPDSSVHLLHVQSPLRYIPYAMGGKFPVEKANRET 548 RV + VG + +L W R + L+HV P IP +G K P +AN E Sbjct: 51 RVHVAVGKSVEKAESLLHWTFRRF--GSCEICLVHVHQPSPLIPTLLG-KLPASQANGEV 107
Query: 549 VKRFKEDIRLEKENLLNNYRQLCDKRKVKHTVCYSENDSVQKGLVDQIMKLG 704 V + + + + LL NY +C + KVK ++ E D VQKG+VD + + G Sbjct: 108 VSAHRREEKKQTNKLLLNYSNICSRMKVKPSIITIEADHVQKGIVDLVNRHG 159
>tr|A2X832|A2X832_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08386 PE=4 SV=1 Length = 978
Score = 57.0 bits (136), Expect = 1e-06 Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 10/136 (7%) Frame = +3
Query: 315 VKGMADIKEESDSAVVNPP---------RVGIGVGTGLS-GLLALKWALERIVPPDSSVH 464 V +A+I E V PP +V + V + G AL+WAL+ + + V Sbjct: 27 VSSVAEISTEVGVEVSPPPPAAAAAAADKVFVAVAADVKYGKSALQWALQNLAKDGAKVV 86
Query: 465 LLHVQSPLRYIPYAMGGKFPVEKANRETVKRFKEDIRLEKENLLNNYRQLCDKRKVKHTV 644 + HV P + IP MG K K N + V ++ R + E L+ Y +C K KV Sbjct: 87 IAHVHCPAQMIPM-MGAKVHYTKMNTKQVNDYRNKEREKAEEKLDEYLLICRKLKVSCEK 145
Query: 645 CYSENDSVQKGLVDQI 692 E D + KGL D + Sbjct: 146 LIIEEDDIAKGLTDLV 161
>tr|Q3E8A3|Q3E8A3_ARATH Uncharacterized protein At5g57035.1 OS=Arabidopsis thaliana GN=At5g57035 PE=4 SV=2 Length = 789
Score = 56.2 bits (134), Expect = 2e-06 Identities = 28/87 (32%), Positives = 46/87 (52%) Frame = +3
Query: 375 VGIGVGTGLSGLLALKWALERIVPPDSSVHLLHVQSPLRYIPYAMGGKFPVEKANRETVK 554 VG VG G + AL+W +E +P + L+HV + IP G K P+E+ + V Sbjct: 29 VGDAVG-GTASRRALRWTIENFLPKIDRLVLVHVMPTVTTIPSPSGSKIPIEELDESVVS 87
Query: 555 RFKEDIRLEKENLLNNYRQLCDKRKVK 635 +K D+R E E + ++++C KV+ Sbjct: 88 MYKRDLRKEFEQVFVPFKRICKSNKVE 114
|