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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961789
Clone id TST39A01NGRL0011_C01
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_C01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGGGAGCGACCTGAAGCGCGAGCAGCCCTTCTCGTCACAATGAAGCTCAACATAGCTAA
TCCGACTACTGGGTGTCAGAAAAAATTGGAGATTGATGATGACTCCAAACTACGGGCCTT
CTATAACAAGCGCCTCTCACAAGAAGTCCTTGGTGATGCACTTGGCGATGAGTTCAAAGG
TTACATGTTCAAGATCATGGGGGGCTGTGATAAGCAAGGTTTTCCTATGAAGCAAGGAGT
TCTCATCCCTGGCCGTGCTCGACTCTTAATGCACCGAGGTACTTCCTGTTTCCGAGGGTA
TGGAAGGAGAAAGGGTGAGCGCAGGCGCAAGTCCGTGAGGGGGTGCATTGTGAGCCCTGA
TCTATCCGTTCTTTTTTTTGTCATTGTGAAGCAAGGGGAGCAACATCTACCTGGTCTCAG
TGACACTGAGAAGCCTAGGATGAGGGGCCCAAAGAGGGCTAGCAAGATCAGAAAGCTTTT
CAATTTGTCCAAGGAGGATGATGTTAGAAAGTACGTTAACACCTACAGGCGAACTTTCAC
ATCTGCGACTGGGAAGAAGCGCAGTAAGGCACCCAAAATTCAGAGACTGGTGACCCCTGT
CACCCTACAAAGGAAGAGACGCAGAATTGCATTGAAGAGACAGCGCGTTG
■■Homology search results ■■ -
sp_hit_id Q9M3V8
Definition sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus officinalis
Align length 188
Score (bit) 295.0
E-value 1.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961789|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_C01, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus offici...   295   1e-79
sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis t...   294   3e-79
sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis t...   289   1e-77
sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus ...   208   2e-53
sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus GN=...   208   2e-53
sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicula...   208   2e-53
sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens GN=...   208   2e-53
sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus puncta...   207   3e-53
sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RP...   207   3e-53
sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 OS=Aplysia californ...   207   5e-53
sp|Q9YGF2|RS6_ONCMY 40S ribosomal protein S6 OS=Oncorhynchus myk...   206   9e-53
sp|P47838|RS6_CHICK 40S ribosomal protein S6 OS=Gallus gallus GN...   204   4e-52
sp|P39017|RS6_XENLA 40S ribosomal protein S6 OS=Xenopus laevis G...   203   7e-52
sp|O01727|RS6_BRAFL 40S ribosomal protein S6 OS=Branchiostoma fl...   201   4e-51
sp|Q95V32|RS6_SPOFR 40S ribosomal protein S6 OS=Spodoptera frugi...   200   6e-51
sp|P29327|RS6_DROME 40S ribosomal protein S6 OS=Drosophila melan...   198   2e-50
sp|Q94624|RS6_MANSE 40S ribosomal protein S6 OS=Manduca sexta GN...   197   4e-50
sp|Q2PQM1|RS6_GLOMM 40S ribosomal protein S6 OS=Glossina morsita...   197   4e-50
sp|Q9U761|RS6_AEDAE 40S ribosomal protein S6 OS=Aedes aegypti GN...   196   9e-50
sp|Q6C169|RS6_YARLI 40S ribosomal protein S6 OS=Yarrowia lipolyt...   194   4e-49
sp|Q9U762|RS6_AEDAL 40S ribosomal protein S6 OS=Aedes albopictus...   194   4e-49
sp|Q9C0Z7|RS6B_SCHPO 40S ribosomal protein S6-B OS=Schizosacchar...   194   4e-49
sp|P02365|RS6_YEAST 40S ribosomal protein S6 OS=Saccharomyces ce...   193   6e-49
sp|P05752|RS6A_SCHPO 40S ribosomal protein S6-A OS=Schizosacchar...   193   6e-49
sp|P41798|RS6_KLUMA 40S ribosomal protein S6 OS=Kluyveromyces ma...   192   1e-48
sp|Q6FJH3|RS6_CANGA 40S ribosomal protein S6 OS=Candida glabrata...   192   1e-48
sp|Q9NEN6|RS6_CAEEL 40S ribosomal protein S6 OS=Caenorhabditis e...   191   2e-48
sp|Q6BXH8|RS6_DEBHA 40S ribosomal protein S6 OS=Debaryomyces han...   189   1e-47
sp|Q74ZK3|RS6_ASHGO 40S ribosomal protein S6 OS=Ashbya gossypii ...   188   2e-47
sp|Q6CM04|RS6_KLULA 40S ribosomal protein S6 OS=Kluyveromyces la...   188   2e-47

>sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6 OS=Asparagus
           officinalis GN=rps6 PE=2 SV=1
          Length = 251

 Score =  295 bits (755), Expect = 1e-79
 Identities = 147/188 (78%), Positives = 156/188 (82%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAFY+KR+SQEV GDALG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+  GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>sp|P51430|RS62_ARATH 40S ribosomal protein S6-2 OS=Arabidopsis
           thaliana GN=RPS6B PE=2 SV=3
          Length = 249

 Score =  294 bits (752), Expect = 3e-79
 Identities = 146/188 (77%), Positives = 156/188 (82%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK N+ANPTTGCQKKLEIDDD KLRAF++KRLSQEV GDALG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+G 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+DTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT+  GKK SKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>sp|O48549|RS61_ARATH 40S ribosomal protein S6-1 OS=Arabidopsis
           thaliana GN=RPS6A PE=1 SV=2
          Length = 250

 Score =  289 bits (739), Expect = 1e-77
 Identities = 143/188 (76%), Positives = 154/188 (81%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK N+ANPTTGCQKKLEIDDD KLRAFY+KR+SQEV GDALG+EFKGY+FKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+DTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT+  GK+ SKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>sp|P62755|RS6_RAT 40S ribosomal protein S6 OS=Rattus norvegicus
           GN=Rps6 PE=1 SV=1
          Length = 249

 Score =  208 bits (529), Expect = 2e-53
 Identities = 110/186 (59%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  DALG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+DT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+       K R+KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|P62754|RS6_MOUSE 40S ribosomal protein S6 OS=Mus musculus
           GN=Rps6 PE=1 SV=1
          Length = 249

 Score =  208 bits (529), Expect = 2e-53
 Identities = 110/186 (59%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  DALG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+DT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+       K R+KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|Q4R4K6|RS6_MACFA 40S ribosomal protein S6 OS=Macaca fascicularis
           GN=RPS6 PE=2 SV=1
          Length = 249

 Score =  208 bits (529), Expect = 2e-53
 Identities = 110/186 (59%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  DALG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+DT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+       K R+KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|P62753|RS6_HUMAN 40S ribosomal protein S6 OS=Homo sapiens
           GN=RPS6 PE=1 SV=1
          Length = 249

 Score =  208 bits (529), Expect = 2e-53
 Identities = 110/186 (59%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  DALG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+DT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+       K R+KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|Q90YR8|RS6_ICTPU 40S ribosomal protein S6 OS=Ictalurus punctatus
           GN=rps6 PE=2 SV=1
          Length = 249

 Score =  207 bits (528), Expect = 3e-53
 Identities = 109/186 (58%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  D LGDE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VI+++GE
Sbjct: 61  FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+D+  PR  GPKRAS+IRKLFNLSKEDDVR+YV   RR  T    K R+KAPKI
Sbjct: 119 KDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|Q5E995|RS6_BOVIN 40S ribosomal protein S6 OS=Bos taurus GN=RPS6
           PE=2 SV=1
          Length = 249

 Score =  207 bits (528), Expect = 3e-53
 Identities = 110/186 (59%), Positives = 132/186 (70%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY KR++ EV  DALG+E+KGY+ +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR RLL+ +G SC+                 CIV  +LSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
           + +PGL+DT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+       K R+KAPKI
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKDGKKPRTKAPKI 176

Query: 581 QRLVTP 598
           QRLVTP
Sbjct: 177 QRLVTP 182


>sp|Q9BMX5|RS6_APLCA 40S ribosomal protein S6 OS=Aplysia californica
           GN=RPS6 PE=2 SV=1
          Length = 247

 Score =  207 bits (526), Expect = 5e-53
 Identities = 112/188 (59%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNI+ P TGCQK +E+DD+ KLR FY+KR+S E+  D LGDE+KGY+ +I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL   R RLL+ +  SC+                 CIV  +LSVL  VI+K+GE
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGE 118

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKK-RSKAPK 577
           Q +PGL+D   PR  GPKRASKIRKLFNLSKEDDVR+YV   RR      GKK +SKAPK
Sbjct: 119 QDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPK 176

Query: 578 IQRLVTPV 601
           IQRLVTPV
Sbjct: 177 IQRLVTPV 184
tr_hit_id A9NNX7
Definition tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 188
Score (bit) 299.0
E-value 1.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961789|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_C01, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea...   299   1e-79
tr|B3TM45|B3TM45_ELAGV S6 ribosomal protein OS=Elaeis guineensis...   296   7e-79
tr|Q2HTS1|Q2HTS1_MEDTR Ribosomal protein S6e OS=Medicago truncat...   295   1e-78
tr|B3TLK9|B3TLK9_ELAGV S6 ribosomal protein OS=Elaeis guineensis...   295   2e-78
tr|Q2VCJ5|Q2VCJ5_SOLTU Putative uncharacterized protein OS=Solan...   295   2e-78
tr|A9TT29|A9TT29_PHYPA Predicted protein OS=Physcomitrella paten...   295   2e-78
tr|A9TKT5|A9TKT5_PHYPA Predicted protein OS=Physcomitrella paten...   295   2e-78
tr|A9TKR6|A9TKR6_PHYPA Predicted protein OS=Physcomitrella paten...   295   2e-78
tr|A9RVN0|A9RVN0_PHYPA Predicted protein OS=Physcomitrella paten...   295   2e-78
tr|Q6SPR3|Q6SPR3_SOYBN Ribosomal protein S6 OS=Glycine max GN=RP...   294   4e-78
tr|A9NU91|A9NU91_PICSI Putative uncharacterized protein OS=Picea...   293   6e-78
tr|Q3HVK4|Q3HVK4_SOLTU Ribosomal protein S6-like protein OS=Sola...   293   8e-78
tr|B7FIJ8|B7FIJ8_MEDTR Putative uncharacterized protein (Fragmen...   293   8e-78
tr|A9TKT4|A9TKT4_PHYPA Predicted protein (Fragment) OS=Physcomit...   292   1e-77
tr|B2BF98|B2BF98_SOYBN Ribosomal protein S6 OS=Glycine max PE=4 ...   291   2e-77
tr|A7R4H9|A7R4H9_VITVI Chromosome undetermined scaffold_690, who...   291   2e-77
tr|A9PE99|A9PE99_POPTR Putative uncharacterized protein OS=Popul...   291   2e-77
tr|A9P9Y9|A9P9Y9_POPTR Putative uncharacterized protein OS=Popul...   291   2e-77
tr|A9P9D9|A9P9D9_POPTR Putative uncharacterized protein OS=Popul...   291   2e-77
tr|A7QT39|A7QT39_VITVI Chromosome undetermined scaffold_165, who...   291   3e-77
tr|Q4AC02|Q4AC02_BRACM 117M18_18 OS=Brassica campestris GN=117M1...   290   4e-77
tr|Q8LH97|Q8LH97_ORYSJ Os07g0622100 protein OS=Oryza sativa subs...   290   5e-77
tr|A2YNT9|A2YNT9_ORYSI Putative uncharacterized protein OS=Oryza...   290   5e-77
tr|Q75LR5|Q75LR5_ORYSJ Os03g0390000 protein OS=Oryza sativa subs...   289   9e-77
tr|A2XHI9|A2XHI9_ORYSI Putative uncharacterized protein OS=Oryza...   289   9e-77
tr|A7NUV2|A7NUV2_VITVI Chromosome chr18 scaffold_1, whole genome...   288   2e-76
tr|Q9FYS0|Q9FYS0_MAIZE 40S ribosomal protein S6 OS=Zea mays GN=r...   288   3e-76
tr|O04014|O04014_MAIZE 40S ribosomal protein S6 OS=Zea mays GN=r...   288   3e-76
tr|B6T4E7|B6T4E7_MAIZE 40S ribosomal protein S6 OS=Zea mays PE=2...   288   3e-76
tr|B6T1H0|B6T1H0_MAIZE 40S ribosomal protein S6 OS=Zea mays PE=2...   288   3e-76

>tr|A9NNX7|A9NNX7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 249

 Score =  299 bits (765), Expect = 1e-79
 Identities = 149/188 (79%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAFY+KRL+QEV GDALG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRLAQEVNGDALGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+DTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTF S +GK RSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFQSKSGKTRSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|B3TM45|B3TM45_ELAGV S6 ribosomal protein OS=Elaeis guineensis
           var. tenera PE=2 SV=1
          Length = 249

 Score =  296 bits (758), Expect = 7e-79
 Identities = 147/188 (78%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GDALG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ +GKK SKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|Q2HTS1|Q2HTS1_MEDTR Ribosomal protein S6e OS=Medicago truncatula
           GN=MtrDRAFT_AC149801g17v2 PE=4 SV=1
          Length = 248

 Score =  295 bits (756), Expect = 1e-78
 Identities = 145/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK N+ANPTTGCQKKLEIDDD KLRAF++KR+SQEVLGDALG+EFKGY+FKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDMKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT+  GKK+SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKAGKKQSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|B3TLK9|B3TLK9_ELAGV S6 ribosomal protein OS=Elaeis guineensis
           var. tenera PE=2 SV=1
          Length = 249

 Score =  295 bits (755), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GD+LG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+ +GKK SKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|Q2VCJ5|Q2VCJ5_SOLTU Putative uncharacterized protein OS=Solanum
           tuberosum PE=2 SV=1
          Length = 249

 Score =  295 bits (754), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 157/188 (83%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV GDALG+EFKGY+FKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL++RGT CF                 CIVSPDLSVL  VIVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLYRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+DTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR FT+ TGK  SKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRNFTTKTGKNASKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|A9TT29|A9TT29_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_225178 PE=4 SV=1
          Length = 249

 Score =  295 bits (754), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNIANPTTGCQKK+EIDDD+KLR FY+KRL+QEV GD LGDEFKGY+FKIMGGCDKQG
Sbjct: 1   MKLNIANPTTGCQKKVEIDDDAKLRQFYDKRLAQEVSGDQLGDEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR +LLMHRG SCF                 CIVSPDLSVL  VIVKQG+
Sbjct: 61  FPMKQGVLTQGRVQLLMHRGVSCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKQGD 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRA+KIRKLFNL+KEDDVRKYVNTYRR+F SATGKKRSKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRATKIRKLFNLTKEDDVRKYVNTYRRSFVSATGKKRSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|A9TKT5|A9TKT5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_94061 PE=4 SV=1
          Length = 247

 Score =  295 bits (754), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNIANPTTGCQKK+EIDDD+KLR FY+KRL+QEV GD LGDEFKGY+FKIMGGCDKQG
Sbjct: 1   MKLNIANPTTGCQKKVEIDDDAKLRQFYDKRLAQEVSGDQLGDEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR +LLMHRG SCF                 CIVSPDLSVL  VIVKQG+
Sbjct: 61  FPMKQGVLTQGRVQLLMHRGVSCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKQGD 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRA+KIRKLFNL+KEDDVRKYVNTYRR+F SATGKKRSKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRATKIRKLFNLTKEDDVRKYVNTYRRSFVSATGKKRSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|A9TKR6|A9TKR6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_223223 PE=4 SV=1
          Length = 247

 Score =  295 bits (754), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNIANPTTGCQKK+EIDDD+KLR FY+KRL+QEV GD LGDEFKGY+FKIMGGCDKQG
Sbjct: 1   MKLNIANPTTGCQKKVEIDDDAKLRQFYDKRLAQEVSGDQLGDEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR +LLMHRG SCF                 CIVSPDLSVL  VIVKQG+
Sbjct: 61  FPMKQGVLTQGRVQLLMHRGVSCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKQGD 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRA+KIRKLFNL+KEDDVRKYVNTYRR+F SATGKKRSKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRATKIRKLFNLTKEDDVRKYVNTYRRSFVSATGKKRSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|A9RVN0|A9RVN0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_161334 PE=4 SV=1
          Length = 249

 Score =  295 bits (754), Expect = 2e-78
 Identities = 146/188 (77%), Positives = 158/188 (84%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MKLNIANPTTGCQKK+EIDDD+KLR FY+KRL+QEV GD LGDEFKGY+FKIMGGCDKQG
Sbjct: 1   MKLNIANPTTGCQKKVEIDDDAKLRQFYDKRLAQEVSGDQLGDEFKGYVFKIMGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL  GR +LLMHRG SCF                 CIVSPDLSVL  VIVKQG+
Sbjct: 61  FPMKQGVLTQGRVQLLMHRGVSCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKQGD 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRA+KIRKLFNL+KEDDVRKYVNTYRR+F SATGKKRSKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRATKIRKLFNLTKEDDVRKYVNTYRRSFVSATGKKRSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188


>tr|Q6SPR3|Q6SPR3_SOYBN Ribosomal protein S6 OS=Glycine max GN=RPS6
           PE=2 SV=1
          Length = 247

 Score =  294 bits (752), Expect = 4e-78
 Identities = 145/188 (77%), Positives = 157/188 (83%)
 Frame = +2

Query: 41  MKLNIANPTTGCQKKLEIDDDSKLRAFYNKRLSQEVLGDALGDEFKGYMFKIMGGCDKQG 220
           MK NIANPTTGCQKKLEIDDD KLRAF++KR+SQEV+GDALG+EFKGY+FKI GGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQG 60

Query: 221 FPMKQGVLIPGRARLLMHRGTSCFXXXXXXXXXXXXXXXXXCIVSPDLSVLFFVIVKQGE 400
           FPMKQGVL PGR RLL+HRGT CF                 CIVSPDLSVL  +IVK+GE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLIIVKKGE 120

Query: 401 QHLPGLSDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTSATGKKRSKAPKI 580
             LPGL+D EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT+  GKK SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKI 180

Query: 581 QRLVTPVT 604
           QRLVTP+T
Sbjct: 181 QRLVTPLT 188