DK961795 |
Clone id |
TST39A01NGRL0011_C07 |
Library |
TST39 |
Length |
689 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_C07. 5' end sequence. |
Accession |
DK961795 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL133Contig1 |
Sequence |
CGGAGAGCTTCGGCTCTCTTCTTTCTGCTCCACCTCCGGAGCATATCCCCTTCCATTGCC GTATCAGTCTCAGCATGGAGAGGGATCTTGCTCTTGGGTGTTCCCAAACTTTGAACACAG CGGTAGTGAGGGCATCTCACCTTCAGAATGCAAGTCGACAGGCTGTTCCATCTCTGCTTC AGTGGAAGCAGAGTTCAATTGGAAATGCTTTCCAGAAGTCACGGTGGCTGATGCCCAGAG TAGGGAAGACGAGTCTCCGGCACTGTGTTGTGAAATCGGACATGACAGCTAGTGCTGCTA CAGCACCTGCTGCCCCACTGTTACTCGAAACACCAAGCGGGCAATTTCTAGCGGAGTTGT TGCAAAGTCATCCTTACCTTGTGTGTGCAGCAGCAGAGCAGCAGCTCGAAACGTTAGCGG AGGCTAGAGACGCAGCAGCCACAAGTCAAGAGCAATCGAGTCCCATGGGCACTGAGATGA TTCTTTACAAACGTATAGCAGAGCTTAAAGCACAGGAAAGGTGCAAGGCATTAGAGGATA TTATGTATGCTCTCATTTGCGAAAAGTTTGTGGAGGCTGGGATATCCTTTGTTCCACAAA TATCAAAGAGCTCTAAGAATCAAAGAGTCGACACTTGGCTTCCACAACACGACGAGTTGG AATCAGTACACTCATTTGCAGCCCTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TER5 |
Definition |
sp|Q8TER5|SOLO_HUMAN Protein SOLO OS=Homo sapiens |
Align length |
76 |
Score (bit) |
37.0 |
E-value |
0.099 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTZ7 |
Definition |
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
119 |
Score (bit) |
105.0 |
E-value |
3.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961795|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_C07, 5' (689 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 105 3e-21 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 101 5e-20 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 101 5e-20 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 100 1e-19 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 99 3e-19 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 99 3e-19 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 99 3e-19 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 96 2e-18 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 90 1e-16 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 90 1e-16 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 89 2e-16 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 89 3e-16 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 89 3e-16 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 87 8e-16 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 87 1e-15 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 86 2e-15 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 85 4e-15 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 83 1e-14 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 75 4e-12 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 74 1e-11 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 74 1e-11 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 71 7e-11 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 70 2e-10 tr|B4FPS1|B4FPS1_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|Q2R4Y4|Q2R4Y4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 65 3e-09 tr|Q2R4Y3|Q2R4Y3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 65 3e-09 tr|A2ZDY7|A2ZDY7_ORYSI Putative uncharacterized protein OS=Oryza... 65 3e-09 tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 65 4e-09
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 105 bits (262), Expect = 3e-21 Identities = 58/119 (48%), Positives = 79/119 (66%), Gaps = 2/119 (1%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA +E+SS GTE++LY+RIAE+KA E Sbjct: 36 GQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEE-HKEESSASGTELVLYRRIAEVKANE 94
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSS--KNQRVDTWLPQHDELESVHSFAALE 689 R KALE+I+YAL+ +KF++A +S +P IS SS + RVDTW Q +LE +HS A E Sbjct: 95 RKKALEEILYALVVQKFMDANVSLIPTISSSSSDSSDRVDTWPSQDGKLEQLHSPEAYE 153
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 101 bits (251), Expect = 5e-20 Identities = 52/114 (45%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSSKNQ--RVDTWLPQHDELESVHS 674 R +ALE+I+YAL+ +KF++A ++ VP I+ SS + RVDTW ELE +HS Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELERLHS 206
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 101 bits (251), Expect = 5e-20 Identities = 52/114 (45%), Positives = 77/114 (67%), Gaps = 2/114 (1%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSSKNQ--RVDTWLPQHDELESVHS 674 R +ALE+I+YAL+ +KF++A ++ VP I+ SS + RVDTW ELE +HS Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELERLHS 206
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 99.8 bits (247), Expect = 1e-19 Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL++LL+ HP+L+ RDAAA Q+ S TE++LY+RIAE+KA E Sbjct: 104 GQFLSQLLKDHPHLLPAAVEQQLERLVADRDAAA-QQDPPSSTSTELVLYRRIAEVKAAE 162
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSSK-NQRVDTWLPQHDELESVHSFAALE 689 R KALE+IMYALI +KF++A IS +P IS ++DTW Q +LE VHS A E Sbjct: 163 RRKALEEIMYALIVQKFMDARISLIPCISMPDPVTGQIDTWPKQDHKLEGVHSSEAFE 220
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 99.0 bits (245), Expect = 3e-19 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQHDELESVHS 674 R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHS 214
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 99.0 bits (245), Expect = 3e-19 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQHDELESVHS 674 R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHS 214
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 99.0 bits (245), Expect = 3e-19 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQHDELESVHS 674 R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHS 214
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 96.3 bits (238), Expect = 2e-18 Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 2/119 (1%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 518 GQFL+++L SHP+LV RD+ +E S GT+++LY+RIAE KA + Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSEK-QKEDPSATGTDLVLYRRIAEAKAND 151
Query: 519 RCKALEDIMYALICEKFVEAGISFVPQISKSS--KNQRVDTWLPQHDELESVHSFAALE 689 R KALE+I+YAL+ +KF++A +S +P I SS + +VDTW Q ++LE +HS A E Sbjct: 152 RRKALEEILYALVVQKFMDANVSLIPTIGPSSAESSGQVDTWPSQDEKLEQLHSPEAYE 210
>tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subsp. japonica GN=Os03g0717900 PE=2 SV=1 Length = 455
Score = 90.1 bits (222), Expect = 1e-16 Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 3/120 (2%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQ-EQSSPMGTEMILYKRIAELKAQ 515 GQFL+++L +HP+L+ RDAA + ++ +P +++LY+RIAE+K + Sbjct: 133 GQFLSQILATHPHLLPAAAEQQLEQLQTDRDAAKDNGGDKPAPSDGDIVLYRRIAEVKEK 192
Query: 516 ERCKALEDIMYALICEKFVEAGISFVPQISKS-SKNQRVDTWLPQ-HDELESVHSFAALE 689 ER +ALE+I+YAL+ +KFVEAG+S VP +S S S + RVD W +LE +HS A E Sbjct: 193 ERKRALEEILYALVVQKFVEAGVSLVPALSHSISSSGRVDQWAESVEGKLEKMHSQEAYE 252
>tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g50870 PE=2 SV=1 Length = 328
Score = 90.1 bits (222), Expect = 1e-16 Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 3/120 (2%) Frame = +3
Query: 339 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQ-EQSSPMGTEMILYKRIAELKAQ 515 GQFL+++L +HP+L+ RDAA + ++ +P +++LY+RIAE+K + Sbjct: 6 GQFLSQILATHPHLLPAAAEQQLEQLQTDRDAAKDNGGDKPAPSDGDIVLYRRIAEVKEK 65
Query: 516 ERCKALEDIMYALICEKFVEAGISFVPQISKS-SKNQRVDTWLPQ-HDELESVHSFAALE 689 ER +ALE+I+YAL+ +KFVEAG+S VP +S S S + RVD W +LE +HS A E Sbjct: 66 ERKRALEEILYALVVQKFVEAGVSLVPALSHSISSSGRVDQWAESVEGKLEKMHSQEAYE 125
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