DK961801
Clone id TST39A01NGRL0011_C13
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_C13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGTTTTTGTCGTCGTATTCTCCATCTCTCTGGTCCCCGCCATAGCCCACTACAGACACGC
TCTCAGCTCGAAACCACCGCTTCTTCCTCCCCCTGTCTCTCCCCCTTTCCCTTTCGCTTC
CTCCCTTCCTCTTCTGCTGTTTCTCTCCGGCTATGGCTTCGGCCATACTGGCCGCCTATC
GCGGTTGATCCTCTACAGCCGCCTGACCTGCAGGATCCATCTCTCATCACTCATAGTCAC
ATCACAGTATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGCCCCACTCCCCA
CACACACACACACACACACACACACACACACCGGTCAATACTAATTCATGCTGCAATCTT
CCTCACCAATCTTCAGTCACACCCCAATTCGCTTGTTTATATCAGCTGATATCTGCTAGT
CTCTCTGAGTAGTAGCTCTTATGCTTTTACGCTTAAAAGAATGCATGGAGGCCTTGGTTG
CAGTGATATCGTCCCTCCGCCGCTGCGAATGTTGGACGTCCCCGCAGCCTATCTTACCCA
TGCCGATGGCCAATTCTCAGATCAATACACCGCTCATGGCTTTCTTGCACCTTCAGGAAG
GCTGCTAACTCTGGAGGAACGCTGTCTAGGGTTGGCAAAGCCTGAGGCAATTGACAGTAG
TACG
■■Homology search results ■■ -
sp_hit_id A7MPE8
Definition sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894)
Align length 71
Score (bit) 30.4
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961801|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_C13, 5'
(664 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase OS=Enteroba... 30 8.8

>sp|A7MPE8|FMT_ENTS8 Methionyl-tRNA formyltransferase
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fmt
PE=3 SV=1
Length = 315

Score = 30.4 bits (67), Expect = 8.8
Identities = 24/71 (33%), Positives = 30/71 (42%)
Frame = +2

Query: 449 TLKRMHGGLGCSDIVPPPLRMLDVPAAYLTHADGQFSDQYTAHGFLAPSGRLLTLEERCL 628
T+ +M GL D+ LR L P AD + Y L P G L TLE+
Sbjct: 138 TIMQMDKGLDTGDM----LRKLSCPIT----ADDTSASLYDKLAQLGPQGLLATLEDLAA 189

Query: 629 GLAKPEAIDSS 661
G A PE D +
Sbjct: 190 GRAVPEKQDDA 200


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961801|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_C13, 5'
(664 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******