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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961813
Clone id TST39A01NGRL0011_D01
Library
Length 692
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_D01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAAAGTAGGATCCTCGGAGATTGTGAGTGCGGAGAGAGAGGGAAGGCAGGCATGGCAACG
ATGACCTCTGCGTCTGCCATCAGCAGCTCCACATTCGCTGGGCAGACTGCGTTGAAGTCA
CAGAGCGAGCTGTCCAAGAGGGTTGGCAATGTGGATGCTCGCGTGACAATGAGGAGGACA
GTGAAGAGCACCCCAGAGAGCATCTGGTATGGCCCCGACCGCCCCAAGTACTTGGGCCCC
TTCTCTGAGGCTACCCCATCCTACCTGACCGGCGAGTTTCCGGGTGACTACGGCTGGGAC
ACGGCCGGTTTGTCTGCAGACCCAGAGACATTCTCCAAGAACAGGGAGCTCGAGGTGATT
CACGCGAGATGGGCAATGCTCGGCGCCCTGGGGTGTGTGACCCCCGAGTTGCTAGCCAAG
AACGGGGTGAAATTCGGAGAGGCAGTGTGGTTCAAGGCCGGCTCCCAGATCTTCGCCGAC
GGCGGTCTTGACTACCTGGGCAACCCCAGCCTTGTGCACGCTCAGAGCATTCTGGCCATC
TGGGCCTGCCAAGTGGTTCTCATGGGTGCCGTTGAAGGCTACAGAGTGGGCGGCGGCCCT
CTTGGAGAGGGCCTAGACCCTGTCTACCCAGGCGGTGCCTTCGACCCCTTGGGTCTGGCT
GACGACCCCGACTCCTTCGCTGAGCTGAAGGT
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 192
Score (bit) 356.0
E-value 6.0e-98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961813|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_D01, 5'
         (692 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   356   6e-98
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   356   6e-98
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   353   4e-97
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   353   5e-97
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   352   8e-97
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   352   1e-96
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   352   1e-96
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   351   2e-96
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   351   2e-96
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   348   1e-95
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   337   4e-92
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   337   5e-92
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   332   2e-90
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   322   9e-88
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   322   9e-88
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   321   3e-87
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   320   6e-87
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   319   1e-86
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   319   1e-86
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   319   1e-86
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   318   2e-86
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   318   2e-86
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   318   2e-86
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   318   2e-86
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   317   3e-86
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   317   3e-86
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   317   5e-86
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   316   7e-86
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   315   2e-85
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   314   3e-85

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  356 bits (914), Expect = 6e-98
 Identities = 167/192 (86%), Positives = 179/192 (93%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           QT LK Q+EL ++VG    RV+MRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           SQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAF 193

Query: 643 DPLGLADDPDSF 678
           DPLGLA+DP++F
Sbjct: 194 DPLGLAEDPEAF 205


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  356 bits (914), Expect = 6e-98
 Identities = 168/197 (85%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALK  +EL  ++G V   RV+MRRTVKS P SIWYGPDRPKYLGPFS+  PSYLTGEF
Sbjct: 14  QTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  353 bits (907), Expect = 4e-97
 Identities = 166/197 (84%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           Q   KSQ+E  ++VGN  + R+TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  353 bits (906), Expect = 5e-97
 Identities = 164/197 (83%), Positives = 184/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALKSQ+EL +++G+ +  R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  352 bits (904), Expect = 8e-97
 Identities = 163/196 (83%), Positives = 183/196 (93%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           QTALK + EL ++VG  D R +MRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAF 193

Query: 643 DPLGLADDPDSFAELK 690
           DPLGLADDP++FAELK
Sbjct: 194 DPLGLADDPEAFAELK 209


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  352 bits (903), Expect = 1e-96
 Identities = 164/190 (86%), Positives = 179/190 (94%)
 Frame = +1

Query: 121 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 300
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 301 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 480
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 481 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 660
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 661 DDPDSFAELK 690
           DDPD+FAELK
Sbjct: 199 DDPDTFAELK 208


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  352 bits (903), Expect = 1e-96
 Identities = 164/190 (86%), Positives = 179/190 (94%)
 Frame = +1

Query: 121 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 300
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 301 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 480
           TAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 481 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 660
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 661 DDPDSFAELK 690
           DDPD+FAELK
Sbjct: 199 DDPDTFAELK 208


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  351 bits (900), Expect = 2e-96
 Identities = 165/197 (83%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALKSQ+EL +++G+    R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  351 bits (900), Expect = 2e-96
 Identities = 167/197 (84%), Positives = 179/197 (90%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           +T L+  +E  ++ GN   AR TMRRTVKS PESIWYGPDRPKYLGPFSE  PSYLTGEF
Sbjct: 14  KTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDPDSFAELK
Sbjct: 194 FDPLGLADDPDSFAELK 210


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  348 bits (894), Expect = 1e-95
 Identities = 163/197 (82%), Positives = 180/197 (91%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTA +SADPETF+KNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWFKA
Sbjct: 75  PGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKA 134

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           G+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PGGA
Sbjct: 135 GAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGA 194

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++ AELK
Sbjct: 195 FDPLGLADDPEACAELK 211
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 197
Score (bit) 363.0
E-value 6.0e-99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961813|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_D01, 5'
         (692 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   363   6e-99
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   362   2e-98
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   362   2e-98
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   361   3e-98
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   360   4e-98
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   360   6e-98
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   359   8e-98
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   357   3e-97
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   356   7e-97
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   356   7e-97
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   356   7e-97
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   356   9e-97
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   356   9e-97
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   355   1e-96
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   355   2e-96
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   354   3e-96
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   354   3e-96
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   353   4e-96
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   352   1e-95
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   352   1e-95
tr|B0L0Y2|B0L0Y2_9POAL Chloroplast chlorophyll a/b binding prote...   352   1e-95
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   351   2e-95
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   351   3e-95
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   350   5e-95
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   350   5e-95
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   350   5e-95
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   350   6e-95
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   350   6e-95
tr|B0L0Y1|B0L0Y1_9POAL Chloroplast chlorophyll a/b binding prote...   350   6e-95
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   349   1e-94

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  363 bits (932), Expect = 6e-99
 Identities = 169/197 (85%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKA 134

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           G+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGA
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA 194

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++FAELK
Sbjct: 195 FDPLGLADDPEAFAELK 211


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  362 bits (928), Expect = 2e-98
 Identities = 167/190 (87%), Positives = 182/190 (95%)
 Frame = +1

Query: 121 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 300
           Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 2   QNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 61

Query: 301 TAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 480
           TAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELLAKNGVKFGEAVWFKAG+QIF++
Sbjct: 62  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSE 121

Query: 481 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 660
           GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLA
Sbjct: 122 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 181

Query: 661 DDPDSFAELK 690
           DDP++FAELK
Sbjct: 182 DDPEAFAELK 191


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  362 bits (928), Expect = 2e-98
 Identities = 170/197 (86%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALK  +EL ++VG +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           G+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  361 bits (926), Expect = 3e-98
 Identities = 169/196 (86%), Positives = 182/196 (92%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           QTALK Q+EL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAF 193

Query: 643 DPLGLADDPDSFAELK 690
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  360 bits (925), Expect = 4e-98
 Identities = 166/196 (84%), Positives = 184/196 (93%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           +TALK Q+EL K+VG    R++M RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  RTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAF 193

Query: 643 DPLGLADDPDSFAELK 690
           DPLGLADDP++FAELK
Sbjct: 194 DPLGLADDPEAFAELK 209


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
           type I OS=Lilium longiflorum PE=2 SV=1
          Length = 264

 Score =  360 bits (923), Expect = 6e-98
 Identities = 168/196 (85%), Positives = 185/196 (94%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           QTALK++ EL ++VG V  RV+MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PELL+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAF 193

Query: 643 DPLGLADDPDSFAELK 690
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  359 bits (922), Expect = 8e-98
 Identities = 166/196 (84%), Positives = 182/196 (92%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 282
           QT LK Q+EL ++VG    R +MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 283 GDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 462
           GDYGWDTAGLSADPETF++NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 463 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 642
           SQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAF 193

Query: 643 DPLGLADDPDSFAELK 690
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding
           protein OS=Prunus persica GN=Lhcb-Pp2 PE=2 SV=1
          Length = 265

 Score =  357 bits (917), Expect = 3e-97
 Identities = 168/197 (85%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALK  +EL +++G +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQSNELIRKIGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KN ELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNGELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           GSQIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 265

 Score =  356 bits (914), Expect = 7e-97
 Identities = 167/197 (84%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALK  ++L ++VG+    RVTMRRTVKS P+SIWYGPDRPK+LGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNDLVRKVGSFGGGRVTMRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PE+LAKNGVKFGE+VWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 265

 Score =  356 bits (914), Expect = 7e-97
 Identities = 167/197 (84%), Positives = 185/197 (93%), Gaps = 1/197 (0%)
 Frame = +1

Query: 103 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 279
           QTALK  ++L ++VG+    RVTMRRTVKS P+SIWYGPDRPK+LGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNDLVRKVGSFGGGRVTMRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEF 73

Query: 280 PGDYGWDTAGLSADPETFSKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 459
           PGDYGWDTAGLSADPETF+KNRELEVIH+RWAMLGALGCV PE+LAKNGVKFGE+VWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKA 133

Query: 460 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 639
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 640 FDPLGLADDPDSFAELK 690
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210