DK961834 |
Clone id |
TST39A01NGRL0011_D23 |
Library |
TST39 |
Length |
638 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_D23. 5' end sequence. |
Accession |
DK961834 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL126Contig1 |
Sequence |
GTGCAAAGCAGCTGCTAAGGAAGGACTCGCAGATTCTCCCGTTCCAAGCCTTCAAGCCAG ACCAGATCCAGCACAGGAAAATCTGTAATTTCAAATGGCTGACGGAGAGGAAGTTCAACC ACTTGTGTGCGACAATGGATCTGGGATGGTCAAGGCTGGTTTCGCTGGCGATGATGCACC TCGGGCTGTATTTCCGAGTATAGTGGGTCGTCCTCGGCATACTGGTGTCATGGTGGGGAT GGGTCAGAAAGATGCTTATGTTGGTGATGAGGCTCAGTCTAAGCGAGGAATATTGACCTT GAAGTATCCTATTGAGCATGGTATCGTCACCAACTGGGATGACATGGAGAAAATCTGGCA CCATACCTTCTATAATGAGCTGCGTGTTGCCCCGGAAGAACACCCAGTACTGCTTACTGA AGCTCCACTCAATCCAAAGGCAAACAGAGAAAAGATGACCCAAATCATGTTTGATACATT CAATGCACCAGCAATGTATGTTGCAATTCAAGCAGTGCTATCTTTATATGCTAGTGGAAG GACGACAGGTATTGTACTCGATTCTGGTGATGGTGTCACACATACTGTGCCTATCTATGA GGGCTATGCACTGCCACATGCCATTCTTCGATTGGATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10AZ4 |
Definition |
sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica |
Align length |
181 |
Score (bit) |
367.0 |
E-value |
1.0e-101 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TYG3 |
Definition |
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
181 |
Score (bit) |
370.0 |
E-value |
1.0e-101 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961834|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_D23, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101 tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 369 e-101 tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 ... 369 e-100 tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella paten... 369 e-100 tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella paten... 369 e-100 tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea m... 367 e-100 tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza... 367 e-100 tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert seque... 367 e-100 tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid... 365 1e-99 tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=... 365 1e-99 tr|O82565|O82565_ANEPH Actin 3 OS=Anemia phyllitidis PE=2 SV=1 365 1e-99 tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza... 365 1e-99 tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza... 365 1e-99 tr|A8W4W6|A8W4W6_9FABA Actin OS=Glycyrrhiza uralensis PE=2 SV=1 365 2e-99 tr|A5BXV1|A5BXV1_VITVI Chromosome chr13 scaffold_17, whole genom... 365 2e-99 tr|Q9FUS4|Q9FUS4_SETIT Actin OS=Setaria italica PE=2 SV=1 364 2e-99 tr|Q94G12|Q94G12_MUSPR Actin OS=Musa ABB Group GN=ACT1 PE=3 SV=1 364 2e-99 tr|Q94DL4|Q94DL4_ORYSJ cDNA, clone: J100088I07, full insert sequ... 364 2e-99 tr|Q947D0|Q947D0_TRIMO Actin (Fragment) OS=Triticum monococcum G... 364 2e-99 tr|Q8H1L9|Q8H1L9_HORVU Actin OS=Hordeum vulgare PE=2 SV=1 364 2e-99 tr|Q7XZK0|Q7XZK0_GOSHI Actin OS=Gossypium hirsutum GN=ACT2 PE=2 ... 364 2e-99 tr|Q7XZJ1|Q7XZJ1_GOSHI Actin OS=Gossypium hirsutum GN=ACT14 PE=2... 364 2e-99 tr|Q6F4H4|Q6F4H4_TOBAC Actin OS=Nicotiana tabacum PE=2 SV=1 364 2e-99 tr|Q67G20|Q67G20_ORYSJ Actin-7, putative, expressed OS=Oryza sat... 364 2e-99 tr|Q65XH8|Q65XH8_ORYSJ Os05g0106600 protein OS=Oryza sativa subs... 364 2e-99 tr|Q5XPX5|Q5XPX5_SACOF Actin OS=Saccharum officinarum PE=2 SV=1 364 2e-99 tr|Q5EWZ5|Q5EWZ5_TRITU Actin OS=Triticum turgidum GN=ACT-1 PE=3 ... 364 2e-99 tr|Q5EWZ1|Q5EWZ1_WHEAT Actin OS=Triticum aestivum GN=ACT-1 PE=3 ... 364 2e-99 tr|Q541W9|Q541W9_ARATH Putative uncharacterized protein At3g1211... 364 2e-99 tr|B8BJ82|B8BJ82_ORYSI Putative uncharacterized protein OS=Oryza... 364 2e-99
>tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226658 PE=3 SV=1 Length = 377
Score = 370 bits (949), Expect = e-101 Identities = 178/181 (98%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 Length = 377
Score = 369 bits (948), Expect = e-101 Identities = 179/181 (98%), Positives = 179/181 (98%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 M D EEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MGDAEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 PE=3 SV=1 Length = 377
Score = 369 bits (946), Expect = e-100 Identities = 177/181 (97%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225906 PE=3 SV=1 Length = 377
Score = 369 bits (946), Expect = e-100 Identities = 177/181 (97%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGE+VQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198730 PE=3 SV=1 Length = 377
Score = 369 bits (946), Expect = e-100 Identities = 177/181 (97%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 377
Score = 367 bits (942), Expect = e-100 Identities = 176/181 (97%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14218 PE=4 SV=1 Length = 377
Score = 367 bits (941), Expect = e-100 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 377
Score = 367 bits (941), Expect = e-100 Identities = 175/181 (96%), Positives = 180/181 (99%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid cultivar GN=ACT1 PE=2 SV=1 Length = 377
Score = 365 bits (937), Expect = 1e-99 Identities = 174/181 (96%), Positives = 181/181 (100%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
>tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=PACT4 PE=2 SV=1 Length = 377
Score = 365 bits (937), Expect = 1e-99 Identities = 174/181 (96%), Positives = 181/181 (100%) Frame = +2
Query: 77 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256 MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 616 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 617 D 619 D Sbjct: 181 D 181
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