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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961844
Clone id TST39A01NGRL0011_E09
Library
Length 631
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTCTCCAT
GGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCTCCAGC
GACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGAGCAGC
GGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCCGATAA
GCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTATCTAGA
TGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGGGGCC
TGGAGGCTTCATTTTTCCTGATTGGTTGAGGTATGGAGAAATCATCAATGGAAGATATGC
AATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCATCCC
TCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTACAA
CTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGCTGA
GCACCGAAGAGCACAGGATTATTATAAGCCT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 141
Score (bit) 239.0
E-value 1.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961844|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E09, 5'
         (631 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   239   1e-62
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   237   4e-62
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   104   3e-22
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   102   2e-21
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    82   2e-15
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    81   4e-15
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    74   5e-13
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    69   2e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    67   1e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    64   5e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    64   5e-10
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    64   5e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   6e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    63   1e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    62   2e-09
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    61   5e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    61   5e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    60   9e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   1e-08
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    59   2e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   3e-08
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...    59   3e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    58   4e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    58   4e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  239 bits (609), Expect = 1e-62
 Identities = 115/141 (81%), Positives = 122/141 (86%), Gaps = 2/141 (1%)
 Frame = +2

Query: 215 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWL 388
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFI P WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 389 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 568
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 569 VLEMALMGFAEHRRAQDYYKP 631
           VLEMALMGFAEHRR QD+ KP
Sbjct: 157 VLEMALMGFAEHRRFQDWAKP 177


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  237 bits (604), Expect = 4e-62
 Identities = 115/140 (82%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
 Frame = +2

Query: 221 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWLR 391
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFI P WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 392 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 571
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 572 LEMALMGFAEHRRAQDYYKP 631
           LEMALMGFAEHRR QD+ KP
Sbjct: 160 LEMALMGFAEHRRFQDWAKP 179


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  104 bits (260), Expect = 3e-22
 Identities = 66/165 (40%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
 Frame = +2

Query: 140 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 319
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 320 FGFDPLGL-MDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 496
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPES------LRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 497 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KP
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKP 175



 Score = 32.3 bits (72), Expect = 2.1
 Identities = 23/52 (44%), Positives = 25/52 (48%)
 Frame = +2

Query: 287 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGA 442
           L+  D   PG   FDPLG     G G       LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  102 bits (253), Expect = 2e-21
 Identities = 66/165 (40%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
 Frame = +2

Query: 140 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 319
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 320 FGFDPLGL-MDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 496
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPES------LKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 497 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KP
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKP 175



 Score = 32.3 bits (72), Expect = 2.1
 Identities = 23/52 (44%), Positives = 25/52 (48%)
 Frame = +2

Query: 287 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGA 442
           L+  D   PG   FDPLG     G G       LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 57/164 (34%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
 Frame = +2

Query: 143 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 322
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 323 GFDPLGLM-DPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 499
           GFDPLGL  DPE         W    E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPEN------LRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 500 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
           W+        G   Y+A   TLFV+E  L  + E RR QD   P
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNP 163


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 81.3 bits (199), Expect = 4e-15
 Identities = 52/135 (38%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
 Frame = +2

Query: 230 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIFPDWLRYGEII 406
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE         W    E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELV 98

Query: 407 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 586
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 587 MGFAEHRRAQDYYKP 631
             + E RR QD   P
Sbjct: 150 FHYVEIRRWQDIKNP 164


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 52/123 (42%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +2

Query: 266 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIFPDWLRYGEIINGRYAMLGAVGA 442
           W    QS +YLDGSL GD GFDPL L  DPE    F+  D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 443 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 622
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 623 YKP 631
             P
Sbjct: 141 KNP 143


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = +2

Query: 293 YLDGSLPGDFGFDPLGL-MDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 469
           +LDGSLPGDFGFDPLGL  DP       F  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP------AFLKWYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 470 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDP 170


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
 Frame = +2

Query: 215 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIFPDWLR 391
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP       F  W R
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP------AFLKWYR 97

Query: 392 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 568
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 569 VLEMALMGFAEHRRAQDYYKP 631
             ++ LMG+ E +R  D++ P
Sbjct: 145 GTQLILMGWVESKRWVDFFDP 165


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
 Frame = +2

Query: 275 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAP 451
           S+Q+ SYL G  PGD+G+D  GL  DPE           R  E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPETFARN------RELEVIHSRWAMLGALGCVFP 113

Query: 452 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEH 604
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF E 
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEG 171

Query: 605 RR 610
            R
Sbjct: 172 YR 173
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 166
Score (bit) 250.0
E-value 6.0e-65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961844|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E09, 5'
         (631 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   250   6e-65
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   246   8e-64
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   243   9e-63
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   242   1e-62
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   240   6e-62
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   239   1e-61
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   236   8e-61
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   234   2e-60
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   232   2e-59
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   232   2e-59
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   229   1e-58
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   228   3e-58
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   228   3e-58
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   226   9e-58
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   226   9e-58
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   226   9e-58
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   225   1e-57
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   224   3e-57
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   196   1e-48
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   193   8e-48
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   191   2e-47
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   191   2e-47
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   183   9e-45
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   183   9e-45
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   181   3e-44
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   181   4e-44
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   177   6e-43
tr|A4QPK1|A4QPK1_ACEAT Chloroplast light-harvesting complex I pr...   177   6e-43
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   175   2e-42
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   175   2e-42

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  250 bits (638), Expect = 6e-65
 Identities = 126/166 (75%), Positives = 136/166 (81%), Gaps = 3/166 (1%)
 Frame = +2

Query: 143 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 313
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 314 GDFGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 493
           GD+GFDPLGLMDPEGPGGF+ P WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 494 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  P
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNP 190


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  246 bits (628), Expect = 8e-64
 Identities = 121/142 (85%), Positives = 127/142 (89%), Gaps = 3/142 (2%)
 Frame = +2

Query: 215 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDW 385
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFI P W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 386 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 565
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 566 FVLEMALMGFAEHRRAQDYYKP 631
           FVLEMALMGFAEHRR QDY  P
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYP 192


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  243 bits (619), Expect = 9e-63
 Identities = 118/140 (84%), Positives = 123/140 (87%), Gaps = 1/140 (0%)
 Frame = +2

Query: 215 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWLR 391
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFI P WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 392 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 571
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 572 LEMALMGFAEHRRAQDYYKP 631
            EMALMGFAEHRR QD+ KP
Sbjct: 159 FEMALMGFAEHRRLQDWAKP 178


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  242 bits (618), Expect = 1e-62
 Identities = 118/140 (84%), Positives = 123/140 (87%), Gaps = 1/140 (0%)
 Frame = +2

Query: 215 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWLR 391
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFI P WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 392 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 571
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 572 LEMALMGFAEHRRAQDYYKP 631
            EMALMGFAEHRR QD+ KP
Sbjct: 159 FEMALMGFAEHRRFQDWAKP 178


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  240 bits (612), Expect = 6e-62
 Identities = 120/165 (72%), Positives = 129/165 (78%), Gaps = 3/165 (1%)
 Frame = +2

Query: 146 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 316
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 317 DFGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 496
           DFGFDPLGL DPEG GGFI P WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 497 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KP
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKP 179


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  239 bits (610), Expect = 1e-61
 Identities = 120/165 (72%), Positives = 129/165 (78%), Gaps = 3/165 (1%)
 Frame = +2

Query: 146 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 316
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 317 DFGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 496
           DFGFDPLGL DPEG GGFI P WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 497 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KP
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKP 179


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/164 (71%), Positives = 127/164 (77%), Gaps = 2/164 (1%)
 Frame = +2

Query: 146 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 319
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 320 FGFDPLGLMDPEGPGGFIFPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 499
           +GFDPLGL DPEG GGFI P WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 500 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKP 631
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  P
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANP 177


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  234 bits (598), Expect = 2e-60
 Identities = 110/141 (78%), Positives = 119/141 (84%), Gaps = 2/141 (1%)
 Frame = +2

Query: 215 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWL 388
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFI P WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 389 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 568
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 569 VLEMALMGFAEHRRAQDYYKP 631
           V  MALMGFAEHRR QD+Y P
Sbjct: 151 VFNMALMGFAEHRRLQDWYNP 171


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  232 bits (591), Expect = 2e-59
 Identities = 112/141 (79%), Positives = 119/141 (84%), Gaps = 2/141 (1%)
 Frame = +2

Query: 215 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWL 388
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFI P WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 389 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 568
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 569 VLEMALMGFAEHRRAQDYYKP 631
           VLEMALMGFAEHRR QD+Y P
Sbjct: 157 VLEMALMGFAEHRRLQDWYNP 177


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  232 bits (591), Expect = 2e-59
 Identities = 112/141 (79%), Positives = 119/141 (84%), Gaps = 2/141 (1%)
 Frame = +2

Query: 215 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIFPDWL 388
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFI P WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 389 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 568
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 569 VLEMALMGFAEHRRAQDYYKP 631
           VLEMALMGFAEHRR QD+Y P
Sbjct: 157 VLEMALMGFAEHRRLQDWYNP 177