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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961848
Clone id TST39A01NGRL0011_E13
Library
Length 658
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCCCAAGCTTCCATGGCTTCCTCCGTTGCCTCCCCCGCTGTTGCATCGCTTCAAGCTGTC
CAGGGCTTAGGACCGTCCCCTTGCACTGGGCAGGCAGTGCCTGCGTCGGCATTCCTTGGA
GCTGGATTGAAGAAGTCCAACATCTCCATCACACCGGCAACTAGCTCTGCAAAGCCATTG
GTGGTGCACGCTTCGGAGGATGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAGGACTT
GCATACGACACTTCCGATGATCAGCAAGACATTACAAGAGGGAAAGGGATGGTGGATGCC
CTCTTCCAAGGGGCAGTTGGCTTGGGTACCCAGCATGCTGTCATGAGTTCCTACGAGTAC
ATCAGCACTGGTCAGAGGACTTTCCAGATGGACAACATGAAGGATGGGTACTACATCGCA
CCGGCTTTCATGGACAAGTTGGTGGTGCACATTGCCAAGAACTTTATGAACCTTCCCAAT
ATTAAGATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTTCCAG
TGTGAACTAGTGTTCTCAAAGCTTGGAATCAACCCCATCATGATGAGTGCTGGTCAGCTC
GAGAGTGGAAATGCTGGTGAACCCGCCAAGCTCATTCGACAGAGATACCGTGAAGCTG
■■Homology search results ■■ -
sp_hit_id Q40281
Definition sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica
Align length 188
Score (bit) 280.0
E-value 6.0e-75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961848|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E13, 5'
         (658 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   280   6e-75
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   275   2e-73
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   273   4e-73
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   273   4e-73
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   272   1e-72
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   267   4e-71
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   264   3e-70
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   264   3e-70
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   262   1e-69
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   260   4e-69
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   260   4e-69
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   258   2e-68
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   258   2e-68
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   256   1e-67
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   248   2e-65
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   201   2e-51
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   120   8e-27
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   119   1e-26
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...   105   2e-22
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    49   2e-05
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    33   1.0  
sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing...    33   1.3  
sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote...    33   1.7  
sp|P00789|CANX_CHICK Calpain-1 catalytic subunit OS=Gallus gallu...    32   2.2  
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio...    32   2.3  
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    32   2.3  
sp|P42375|CH60_PORGI 60 kDa chaperonin OS=Porphyromonas gingival...    32   2.3  
sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN...    32   2.3  
sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_...    32   3.0  
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE...    32   3.0  

>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  280 bits (715), Expect = 6e-75
 Identities = 138/188 (73%), Positives = 155/188 (82%)
 Frame = +1

Query: 94  AVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDI 273
           +VP+S FLG+ LKK N   T +  S+  L + AS DE KQT KD+W GLA+DTSDDQQDI
Sbjct: 26  SVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDI 85

Query: 274 TRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHI 453
           TRGKG VD+LFQ   G GT  A+MSSYEYISTG R +  DN  DGYYIAPAFMDKLVVHI
Sbjct: 86  TRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 145

Query: 454 AKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEPAKL 633
            KNFM LPN+K+PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAG+LESGNAGEPAKL
Sbjct: 146 TKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKL 205

Query: 634 IRQRYREA 657
           IRQRYREA
Sbjct: 206 IRQRYREA 213


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  275 bits (702), Expect = 2e-73
 Identities = 138/194 (71%), Positives = 155/194 (79%), Gaps = 4/194 (2%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKKSNISITP----ATSSAKPLVVHASEDESKQTKKDKWAGLAYDTS 255
           G + P SAF G  LKK+  S  P       S K +      +ES+QT KD+W GLAYD S
Sbjct: 24  GASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83

Query: 256 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 435
           DDQQDITRGKGMVD LFQ  +  GT +AVMSSYEY+STG R  Q+DN+KDG+YIAPAF+D
Sbjct: 84  DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLD 141

Query: 436 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNA 615
           KLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNA
Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201

Query: 616 GEPAKLIRQRYREA 657
           GEPAKLIRQRYREA
Sbjct: 202 GEPAKLIRQRYREA 215


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  273 bits (699), Expect = 4e-73
 Identities = 138/197 (70%), Positives = 154/197 (78%)
 Frame = +1

Query: 67  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 246
           L  S      VP++AF G+ LKKS     P  SS    +V     E +QT KDKW GLAY
Sbjct: 18  LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 247 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 426
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+YIS G R + +DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 427 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLES 606
           FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 607 GNAGEPAKLIRQRYREA 657
           GNAGEPAKLIRQRYREA
Sbjct: 197 GNAGEPAKLIRQRYREA 213


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  273 bits (699), Expect = 4e-73
 Identities = 138/197 (70%), Positives = 154/197 (78%)
 Frame = +1

Query: 67  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 246
           L  S      VP++AF G+ LKKS     P  SS    +V     E +QT KDKW GLAY
Sbjct: 18  LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 247 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 426
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+YIS G R + +DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 427 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLES 606
           FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 607 GNAGEPAKLIRQRYREA 657
           GNAGEPAKLIRQRYREA
Sbjct: 197 GNAGEPAKLIRQRYREA 213


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  272 bits (696), Expect = 1e-72
 Identities = 135/190 (71%), Positives = 154/190 (81%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 267
           G  VP SAFLG+ LK S+   T    +    +V A +DE KQT+KDKW GLA+DTSDDQQ
Sbjct: 22  GGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIV-AEQDEEKQTEKDKWRGLAFDTSDDQQ 80

Query: 268 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 447
           DITRGKG+ D LFQ  +G GT +AV+SSYEYIS G R +  DN  DG+YIAPAFMDKL V
Sbjct: 81  DITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140

Query: 448 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEPA 627
           HI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAGEPA
Sbjct: 141 HIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 200

Query: 628 KLIRQRYREA 657
           KLIRQRYREA
Sbjct: 201 KLIRQRYREA 210


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  267 bits (682), Expect = 4e-71
 Identities = 131/194 (67%), Positives = 159/194 (81%), Gaps = 4/194 (2%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 255
           G + P+SAF G  LKK   S +  +  TS +  +V    E +E++QT+ D+W GLAYD S
Sbjct: 24  GASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVS 83

Query: 256 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 435
           DDQQDITRGKG+VD+LFQ  +  GT +AV+SS++Y+S G R +  DN+KDG+YIAPAF+D
Sbjct: 84  DDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLD 143

Query: 436 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNA 615
           KLVVHIAKNFM LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNA
Sbjct: 144 KLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203

Query: 616 GEPAKLIRQRYREA 657
           GEPAKLIRQRYREA
Sbjct: 204 GEPAKLIRQRYREA 217


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  264 bits (675), Expect = 3e-70
 Identities = 132/189 (69%), Positives = 152/189 (80%), Gaps = 1/189 (0%)
 Frame = +1

Query: 94  AVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 270
           + PAS FLG  +   S  + +   S+    V+   ED  KQT  D+W GLAYDTSDDQQD
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKED--KQTDGDRWRGLAYDTSDDQQD 84

Query: 271 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 450
           ITRGKGMVD++FQ  +G GT HAV+SSYEY+S G R + +DNM DG+YIAPAFMDKLVVH
Sbjct: 85  ITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVH 144

Query: 451 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEPAK 630
           I KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K+GINPIMMSAG+LESGNAGEPAK
Sbjct: 145 ITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAK 204

Query: 631 LIRQRYREA 657
           LIRQRYREA
Sbjct: 205 LIRQRYREA 213


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  264 bits (675), Expect = 3e-70
 Identities = 131/194 (67%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 255
           G +VP++AF G  LKK     +S    T+ +  +V    + D  KQT  D+W GL  D S
Sbjct: 24  GTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFS 83

Query: 256 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 435
           DDQQDITRGKGMVD+LFQ   G GT HAV+ SYEY+S G R + +DN  DG+YIAPAFMD
Sbjct: 84  DDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMD 143

Query: 436 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNA 615
           KLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF K+GINPIMMSAG+LESGNA
Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 203

Query: 616 GEPAKLIRQRYREA 657
           GEPAKLIRQRYREA
Sbjct: 204 GEPAKLIRQRYREA 217


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  262 bits (669), Expect = 1e-69
 Identities = 136/193 (70%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
 Frame = +1

Query: 100 PASA---FLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSD 258
           PAS    FLG  LKK   S ++    +S+     V A E DE KQT +D+W GLAYD SD
Sbjct: 12  PASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISD 71

Query: 259 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 438
           DQQDITRGKG VD+LFQ   G GT  AV+SSYEY+S G RT+  DN   G+YIAPAFMDK
Sbjct: 72  DQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDK 131

Query: 439 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAG 618
           LVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAG
Sbjct: 132 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 191

Query: 619 EPAKLIRQRYREA 657
           EPAKLIRQRYREA
Sbjct: 192 EPAKLIRQRYREA 204


>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Solanum pennellii PE=2 SV=1
          Length = 459

 Score =  260 bits (665), Expect = 4e-69
 Identities = 130/193 (67%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSD 258
           G +VP++AF G  LKK     +S +P  S+    VV    DE   TK+D+W GL  +TSD
Sbjct: 24  GTSVPSTAFFGKSLKKVYAKGVS-SPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSD 79

Query: 259 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 438
           DQQDI RGKG+VD+LFQ   G GT HA+M+SYEY+S   +T+Q+DN  DG+YIAPAFMDK
Sbjct: 80  DQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDK 139

Query: 439 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAG 618
           LVVHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF K+GINPIMMSAG+LESGNAG
Sbjct: 140 LVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAG 199

Query: 619 EPAKLIRQRYREA 657
           EPAKLIRQRYREA
Sbjct: 200 EPAKLIRQRYREA 212
tr_hit_id A7PIQ8
Definition tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera
Align length 190
Score (bit) 286.0
E-value 6.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961848|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E13, 5'
         (658 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   286   6e-76
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   286   1e-75
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   284   4e-75
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   284   4e-75
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   279   1e-73
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   278   3e-73
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   278   3e-73
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   277   5e-73
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   275   2e-72
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   275   2e-72
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   275   2e-72
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   275   2e-72
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   275   2e-72
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   275   2e-72
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   273   5e-72
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   273   5e-72
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   273   5e-72
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   273   7e-72
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   273   9e-72
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   272   1e-71
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   270   8e-71
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   269   1e-70
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   266   6e-70
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   266   6e-70
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   266   8e-70
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten...   266   8e-70
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   266   1e-69
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   265   2e-69
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   264   3e-69
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   264   3e-69

>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001
           PE=4 SV=1
          Length = 438

 Score =  286 bits (733), Expect = 6e-76
 Identities = 141/190 (74%), Positives = 158/190 (83%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 267
           G +VP+SAFLG+ LKK N   T +  S+    V A  D+  QT+KDKW GLA+DTSDDQQ
Sbjct: 25  GASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGLAFDTSDDQQ 84

Query: 268 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 447
           DI RGKGMVD+LFQ  +  GT +AVMSSYEYISTG R + +DN  DG+YIAPAFMDKLVV
Sbjct: 85  DIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVV 144

Query: 448 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEPA 627
           HI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAG+LESGNAGEPA
Sbjct: 145 HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 204

Query: 628 KLIRQRYREA 657
           KLIRQRYREA
Sbjct: 205 KLIRQRYREA 214


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  286 bits (731), Expect = 1e-75
 Identities = 141/191 (73%), Positives = 158/191 (82%)
 Frame = +1

Query: 85  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 264
           TG +VP+SAFLG  LKK +  I    +S+    V A  DE KQT KDKW GLA+D SDDQ
Sbjct: 23  TGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQ 82

Query: 265 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 444
           QDITRGKGMVD+LFQ  +  GT +AVMSSY+YISTG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLV 142

Query: 445 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEP 624
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 202

Query: 625 AKLIRQRYREA 657
           AKLIRQRYREA
Sbjct: 203 AKLIRQRYREA 213


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  284 bits (726), Expect = 4e-75
 Identities = 139/191 (72%), Positives = 159/191 (83%)
 Frame = +1

Query: 85  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 264
           TG +VP+SAF G+ LKK +   T    ++    V A  DE++QT+KD+W GLAYD SDDQ
Sbjct: 23  TGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82

Query: 265 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 444
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142

Query: 445 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEP 624
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAG+LESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202

Query: 625 AKLIRQRYREA 657
           AKLIRQRYREA
Sbjct: 203 AKLIRQRYREA 213


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  284 bits (726), Expect = 4e-75
 Identities = 139/191 (72%), Positives = 159/191 (83%)
 Frame = +1

Query: 85  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 264
           TG +VP+SAF G+ LKK +   T    ++    V A  DE++QT+KD+W GLAYD SDDQ
Sbjct: 23  TGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82

Query: 265 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 444
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142

Query: 445 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEP 624
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAG+LESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202

Query: 625 AKLIRQRYREA 657
           AKLIRQRYREA
Sbjct: 203 AKLIRQRYREA 213


>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
           aethiopica GN=rca4 PE=2 SV=1
          Length = 435

 Score =  279 bits (713), Expect = 1e-73
 Identities = 142/192 (73%), Positives = 159/192 (82%), Gaps = 1/192 (0%)
 Frame = +1

Query: 85  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSDD 261
           +G +V  S FLG  LK  N S+    +S   L V A++ DESKQTK D+WAGL  DTSDD
Sbjct: 20  SGASVTRSGFLGTSLKTVNPSLGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDD 79

Query: 262 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 441
           QQDITRGKGMVD+LFQ  +G GT + V+SSYEYISTG R+F +DN  +G YIAPAFMDKL
Sbjct: 80  QQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKL 139

Query: 442 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGE 621
           VVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAGE
Sbjct: 140 VVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 199

Query: 622 PAKLIRQRYREA 657
           PAKLIRQRYREA
Sbjct: 200 PAKLIRQRYREA 211


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  278 bits (710), Expect = 3e-73
 Identities = 141/197 (71%), Positives = 156/197 (79%)
 Frame = +1

Query: 67  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 246
           L  S   G  VP SAF G  LKK           +    V A  DE+KQT+KDKW GLAY
Sbjct: 18  LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77

Query: 247 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 426
           DTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSY+YISTG RT+ ++N  DG+YIAPA
Sbjct: 78  DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136

Query: 427 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLES 606
           FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAG+LES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196

Query: 607 GNAGEPAKLIRQRYREA 657
           GNAGEPAKLIRQRYREA
Sbjct: 197 GNAGEPAKLIRQRYREA 213


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  278 bits (710), Expect = 3e-73
 Identities = 141/197 (71%), Positives = 156/197 (79%)
 Frame = +1

Query: 67  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 246
           L  S   G  VP SAF G  LKK           +    V A  DE+KQT+KDKW GLAY
Sbjct: 18  LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77

Query: 247 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 426
           DTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSY+YISTG RT+ ++N  DG+YIAPA
Sbjct: 78  DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136

Query: 427 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLES 606
           FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAG+LES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196

Query: 607 GNAGEPAKLIRQRYREA 657
           GNAGEPAKLIRQRYREA
Sbjct: 197 GNAGEPAKLIRQRYREA 213


>tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=2
           SV=1
          Length = 373

 Score =  277 bits (708), Expect = 5e-73
 Identities = 137/191 (71%), Positives = 157/191 (82%)
 Frame = +1

Query: 85  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 264
           TG  +P +AF G+ LKK N  +T    +A  +   A +DE KQT KD+W GLA+DTSDDQ
Sbjct: 24  TGGLLPNTAFFGSSLKKMNSRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQ 83

Query: 265 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 444
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 84  QDITRGKGMVDSLFQAPMQTGTHYAVMSSYEYLSTGLRQY-LDNNMDGFYIAPAFMDKLV 142

Query: 445 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEP 624
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 202

Query: 625 AKLIRQRYREA 657
           AKLIRQR REA
Sbjct: 203 AKLIRQRCREA 213


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 461

 Score =  275 bits (702), Expect = 2e-72
 Identities = 137/192 (71%), Positives = 154/192 (80%), Gaps = 2/192 (1%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKKSNIS--ITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDD 261
           G  VP SAF G  LKK + S       SS    VV    DE KQT+KD+W GL  D SDD
Sbjct: 24  GSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDD 83

Query: 262 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 441
           QQDITRGKGMVD+LFQ   G GT + V+SSYEY+S G RT+ +DNM DGYYIAPAFMDK+
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKI 143

Query: 442 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGE 621
           VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAG+LESGNAGE
Sbjct: 144 VVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGE 203

Query: 622 PAKLIRQRYREA 657
           PAKLIRQRYREA
Sbjct: 204 PAKLIRQRYREA 215


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 476

 Score =  275 bits (702), Expect = 2e-72
 Identities = 137/191 (71%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
 Frame = +1

Query: 88  GQAVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 264
           G  VP SAF G  LKK S+   T +  S+    V A  DE KQT KD+W GL  D SDDQ
Sbjct: 24  GSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQ 83

Query: 265 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 444
           QDITRGKGMVD+LFQ   G GT + ++SSYEY+S G RT+ +DN  DGYYIAPAFMDKLV
Sbjct: 84  QDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLV 143

Query: 445 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGQLESGNAGEP 624
           VHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAG+LESGNAGEP
Sbjct: 144 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 203

Query: 625 AKLIRQRYREA 657
           AKLIRQRYREA
Sbjct: 204 AKLIRQRYREA 214