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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961853
Clone id TST39A01NGRL0011_E19
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGACAATGTGCGAGTGTCTGCGCAGGGGCACAAAATTTGAACCTGGACGAGCCAAGAGAG
CTTCCCGCAGAGCTTAGCAGACGTCTTTCTGTGTGTCTCCGAGAAGCGTCGTTTACGCCG
CAGCTTTCCTAGGGCTGGAGGATCGTCATGGAGACTGCGAGCGCCCACCATCGCTGTCTC
CAGGAGTCCTTCCGCTTCTCGTCGGACTCGCTCTTCCCCTTTCGGCGTAAGCATTCTCAC
CATCGTCAATGTTTCAGTCTCCTTGCCTTCAGGTCCCATTCGACTTCATACCTACACACG
CAGGCTCCCTTCAGCAGCAATGCAAATCTTGCTGCTTCCATTAGGCCTGGGTGTAGGAAA
CGAGGTCTGTCATGCTCAGGTTCAGAGAAGGCAGAAACAGACCAGGTTGCTTCAAATGGT
CTTACTGAGCTACCCCTCTTTCCTCTGCCCCTCATTCTCTTTCCAGGTACCATAGCTCCT
CTTCAGATATTTGAATATCGGTACCGCATGATGATGCACACTCTGCTGCAGACGGATTTA
CGGTTTGGGCTCATCTATGCGGATCCAAAAACCTCAAGCTTGGCAGAAGTTGGATGTGTT
GCAGAGGTCATAAAGCATGAGAGGCTGGTCGATGATCGCTTTTTCATCATCTGCAAAGGG
CAAGAG
■■Homology search results ■■ -
sp_hit_id Q8HXH0
Definition sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis
Align length 55
Score (bit) 38.1
E-value 0.043
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961853|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E19, 5'
         (666 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING f...    38   0.043
sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING f...    38   0.043
sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING f...    37   0.095
sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING f...    36   0.21 
sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING f...    34   0.61 
sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Ho...    32   4.0  

>sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING
           finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2
           SV=1
          Length = 718

 Score = 38.1 bits (87), Expect = 0.043
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 639
           PL IFE  YR+M+   ++T  R FG+   DP     AE GC+ E+   +   D R
Sbjct: 530 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFAEYGCILEIRNVQFFADGR 583


>sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING
           finger protein 3 OS=Homo sapiens GN=LONRF3 PE=2 SV=1
          Length = 759

 Score = 38.1 bits (87), Expect = 0.043
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 639
           PL IFE  YR+M+   ++T  R FG+   DP     AE GC+ E+   +   D R
Sbjct: 571 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFAEYGCILEIRNVQFFADGR 624


>sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING
           finger protein 1 OS=Homo sapiens GN=LONRF1 PE=2 SV=1
          Length = 416

 Score = 37.0 bits (84), Expect = 0.095
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 639
           PL +FE RYR+M+   +QT  + FG+  +D + +S A+ GC+ ++     L D R
Sbjct: 226 PLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQ-NSFADYGCMLQIRNVHFLPDGR 279


>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING
           finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1
          Length = 753

 Score = 35.8 bits (81), Expect = 0.21
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLR-FGLIYADPKTSSLAEVGCVAEVIKHERLVDDR 639
           PL IFE  YR+M+   ++T  R FG+   DP      E GC+ E+   +   D R
Sbjct: 565 PLHIFEPCYRLMIRRCIETGTRQFGMCLGDP-VKGFVEYGCILEIRNVQFFSDGR 618


>sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING
           finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=2
          Length = 754

 Score = 34.3 bits (77), Expect = 0.61
 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDL-RFGLIYADPKTSSLAEVGCVAEV 609
           PL +FE RYR+M+   ++T   RFG+  +  + + L+E GC+ E+
Sbjct: 553 PLHVFEPRYRLMIRRCMETGTKRFGMCLS-AEHAGLSEYGCMLEI 596


>sp|Q86V15|CASZ1_HUMAN Zinc finger protein castor homolog 1 OS=Homo
            sapiens GN=CASZ1 PE=2 SV=3
          Length = 1759

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 31/115 (26%), Positives = 42/115 (36%)
 Frame = +1

Query: 34   NLNLDEPRELPAELSRRLSVCLREASFTPQLS*GWRIVMETASAHHRCLQESFRFSSDSL 213
            NL LD+ +   A LSR  + C                     S H  CL+  FR +  + 
Sbjct: 1486 NLVLDDFKRFKASLSRHFADC----------------PFSGTSTHFHCLRCRFRCTDSTK 1529

Query: 214  FPFRRKHSHHRQCFSLLAFRSHSTSYLHTQAPFSSNANLAASIRPGCRKRGLSCS 378
                RKH   +   S   FR            FSS+A+ A    P C+ + L CS
Sbjct: 1530 VTAHRKHHGKQDVISAAGFRQ-----------FSSSADCAV---PDCKYK-LKCS 1569
tr_hit_id A7NT45
Definition tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera
Align length 107
Score (bit) 110.0
E-value 8.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961853|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E19, 5'
         (666 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome...   110   8e-23
tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease) (Prot...   110   1e-22
tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thalian...   107   7e-22
tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized...   103   7e-21
tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subs...    99   3e-19
tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza...    99   3e-19
tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza...    99   3e-19
tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1        97   7e-19
tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea m...    96   2e-18
tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella paten...    86   2e-15
tr|Q55701|Q55701_SYNY3 ATP-dependent proteinase; BsgA OS=Synecho...    81   7e-14
tr|B4WS27|B4WS27_9SYNE ATP-dependent protease La (LON) domain su...    79   3e-13
tr|Q2JTE4|Q2JTE4_SYNJA ATP-dependent protease La domain protein ...    78   4e-13
tr|A0YL65|A0YL65_9CYAN Peptidase S16, lon OS=Lyngbya sp. PCC 810...    77   1e-12
tr|Q2JP14|Q2JP14_SYNJB ATP-dependent protease La domain protein ...    76   2e-12
tr|B0CCC8|B0CCC8_ACAM1 ATP-dependent protease La (LON) domain pr...    76   2e-12
tr|B7K102|B7K102_SYNP8 Peptidase S16 lon domain protein OS=Synec...    76   2e-12
tr|B4C239|B4C239_9CHRO Peptidase S16 lon domain protein OS=Cyano...    76   2e-12
tr|Q8DG63|Q8DG63_THEEB Tlr2461 protein OS=Thermosynechococcus el...    75   3e-12
tr|Q8YP65|Q8YP65_ANASP All4335 protein OS=Anabaena sp. (strain P...    75   4e-12
tr|Q3MDM7|Q3MDM7_ANAVT Peptidase S16, lon OS=Anabaena variabilis...    75   4e-12
tr|B7K832|B7K832_9CHRO Peptidase S16 lon domain protein OS=Cyano...    75   4e-12
tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain protein OS=Nost...    75   5e-12
tr|B5W7X9|B5W7X9_SPIMA Peptidase S16 lon domain protein OS=Arthr...    75   5e-12
tr|A0ZFC3|A0ZFC3_NODSP Peptidase S16, lon OS=Nodularia spumigena...    75   5e-12
tr|B4AVR1|B4AVR1_9CHRO Peptidase S16 lon domain protein OS=Cyano...    74   6e-12
tr|B0JWI5|B0JWI5_MICAN Probable ATP-dependent protease OS=Microc...    73   1e-11
tr|A8YAB6|A8YAB6_MICAE Similar to tr|Q4C268|Q4C268_CROWT Peptida...    73   1e-11
tr|Q3AMT8|Q3AMT8_SYNSC Peptidase S16, lon-like OS=Synechococcus ...    73   2e-11
tr|A9BCJ8|A9BCJ8_PROM4 ATP-dependent protease La (LON) domain OS...    73   2e-11

>tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014531001
           PE=4 SV=1
          Length = 284

 Score =  110 bits (275), Expect = 8e-23
 Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
 Frame = +1

Query: 355 RKRGLSCSGS---EKAETDQVASNXXXXXXXXXXXXXXXXXXXAPLQIFEYRYRMMMHTL 525
           ++  L CS S   EK  T    S+                    PLQIFE+RYRMMMHTL
Sbjct: 50  KENSLRCSASSFSEKHHTGSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTL 109

Query: 526 LQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKGQE 666
           LQTDLRFG+IY+D  T+  A+VGCV EV+KHERLVDDRFF+ICKGQE
Sbjct: 110 LQTDLRFGVIYSD-ATTGTADVGCVGEVVKHERLVDDRFFLICKGQE 155


>tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease)
           (Protease, putative) OS=Arabidopsis thaliana
           GN=At1g75460 PE=2 SV=1
          Length = 278

 Score =  110 bits (274), Expect = 1e-22
 Identities = 48/63 (76%), Positives = 58/63 (92%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 657
           PLQIFE+RYR+MMHTLLQ+DLRFG++Y+D  + S AEVGCV EV+KHERLVDDRFF++CK
Sbjct: 88  PLQIFEFRYRIMMHTLLQSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147

Query: 658 GQE 666
           GQE
Sbjct: 148 GQE 150


>tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 278

 Score =  107 bits (267), Expect = 7e-22
 Identities = 47/63 (74%), Positives = 57/63 (90%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 657
           PLQIFE+RYR+MMHTLL +DLRFG++Y+D  + S AEVGCV EV+KHERLVDDRFF++CK
Sbjct: 88  PLQIFEFRYRIMMHTLLLSDLRFGVVYSDSVSGSAAEVGCVGEVVKHERLVDDRFFLVCK 147

Query: 658 GQE 666
           GQE
Sbjct: 148 GQE 150


>tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized
           protein At1g19740) OS=Arabidopsis thaliana GN=At1g19740
           PE=2 SV=1
          Length = 278

 Score =  103 bits (258), Expect = 7e-21
 Identities = 45/63 (71%), Positives = 56/63 (88%)
 Frame = +1

Query: 478 PLQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICK 657
           PLQIFE+RYR+MM TLLQ+DLRFG++Y+D  + S A +GCV E++KHERLVDDRFF+ICK
Sbjct: 88  PLQIFEFRYRVMMQTLLQSDLRFGVVYSDAVSGSAAGIGCVGEIVKHERLVDDRFFLICK 147

Query: 658 GQE 666
           GQE
Sbjct: 148 GQE 150


>tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subsp.
           japonica GN=P0409B11.11 PE=2 SV=1
          Length = 291

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +1

Query: 481 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 660
           L IFE+RYR+MMHT+LQTDLRFG+++A       A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94  LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153

Query: 661 QE 666
           QE
Sbjct: 154 QE 155


>tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023442 PE=4 SV=1
          Length = 291

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +1

Query: 481 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 660
           L IFE+RYR+MMHT+LQTDLRFG+++A       A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94  LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153

Query: 661 QE 666
           QE
Sbjct: 154 QE 155


>tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26152 PE=4 SV=1
          Length = 291

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +1

Query: 481 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 660
           L IFE+RYR+MMHT+LQTDLRFG+++A       A+VGCV EV+KHERL DDRFF+ICKG
Sbjct: 94  LHIFEFRYRIMMHTVLQTDLRFGVVFAGSGAGGAADVGCVGEVVKHERLADDRFFLICKG 153

Query: 661 QE 666
           QE
Sbjct: 154 QE 155


>tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1
          Length = 286

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = +1

Query: 481 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 660
           L IFEYRYR+MMHT+LQTDLRFG+++    + S AEVGCV EV+KHERL DDRFF+ICKG
Sbjct: 90  LHIFEYRYRIMMHTVLQTDLRFGIVFVG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 148

Query: 661 QE 666
           Q+
Sbjct: 149 QQ 150


>tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 289

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = +1

Query: 481 LQIFEYRYRMMMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKG 660
           L IFE RYR+MMHT+LQTDLRFG+++A   + S AEVGCV EV+KHERL DDRFF+ICKG
Sbjct: 93  LHIFELRYRIMMHTVLQTDLRFGIVFAG-NSGSAAEVGCVGEVVKHERLADDRFFLICKG 151

Query: 661 QE 666
           Q+
Sbjct: 152 QQ 153


>tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_204775 PE=4 SV=1
          Length = 181

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = +1

Query: 511 MMHTLLQTDLRFGLIYADPKTSSLAEVGCVAEVIKHERLVDDRFFIICKGQE 666
           MMHTLLQTDLRFG+++AD K+  +A VGCV E++KHERLVDDRFF+ICKGQE
Sbjct: 1   MMHTLLQTDLRFGIVFAD-KSVGVAAVGCVGEIVKHERLVDDRFFMICKGQE 51