DK961855
Clone id TST39A01NGRL0011_E21
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCCCATTCTTTTTGCCCTTCGTCTGCGTGCGCCATAGCCCAAAGTAGAGGCACACACAC
GCGCTCGATCGTTCGCTTCCACATGTGTGGGTGTGTGTCACTGCGATGATCTCGCTTAAT
TTGGGCTCACTGATTTTTTGCATCCAGTTTGCGATCAATTGCCTACAGCCCAGAATTGCG
GAGCGTTGCCTGTGTGCGCGCCCATCCTTGCGGGCCTGCGGGCGATGGTGGGTCGCCGTC
TCTTCCTCAGATAGCTGCCCCCTTCTCTAATGGGTCGTGCCGTAGCAGTCTAGAATTCCT
TCCCGCTCACGGATCCCTATCCTCTTCCTCTTCAATTTTGGGTTTCCCCCCTTGTTATTC
CCTTGGTTTTGGTGATCGATCGTGCACGAGCGGCCTCACAATGTTCGCAGCCTAGTTAAG
AGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACA
CACAGACACACAGAGACCCGCCATACCTTTCTGCTTATAACCTTGGTCTCTTTTTCACTC
TCCTGCCCCACGCCTTGACGGTTTTTTGGCGCTCAAATTAGCTTCTCTCCAGCCCGTTGA
CCTTCCCGGCTTTTTTACACCACGCGATTGCCCTTCCGATTTTAACCCAGATTTCTCTGT
GCATTGCT
■■Homology search results ■■ -
sp_hit_id Q8CJI4
Definition sp|Q8CJI4|H1FNT_MOUSE Testis-specific H1 histone OS=Mus musculus
Align length 32
Score (bit) 30.8
E-value 6.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961855|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E21, 5'
(668 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CJI4|H1FNT_MOUSE Testis-specific H1 histone OS=Mus musculus... 31 6.8
sp|Q8C6C7|CJ084_MOUSE Uncharacterized protein C10orf84 homolog O... 30 8.9

>sp|Q8CJI4|H1FNT_MOUSE Testis-specific H1 histone OS=Mus musculus
GN=H1fnt PE=2 SV=2
Length = 398

Score = 30.8 bits (68), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3

Query: 405 NIVRPLVHDRSPKPRE*QGGKPKIEEEEDRDP 310
N VRP D SP+P E + K+ EE+ ++P
Sbjct: 327 NRVRPTKEDTSPRPAEEKSSNSKLREEKGQEP 358


>sp|Q8C6C7|CJ084_MOUSE Uncharacterized protein C10orf84 homolog
OS=Mus musculus GN=D19Ertd737e PE=2 SV=1
Length = 236

Score = 30.4 bits (67), Expect = 8.9
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -2

Query: 658 REIWVKIGRAIAWCKKAGKVNGLERS*FERQKTVKAWGRRVKKR 527
RE+ VKI +AIA K E S R+K AWG KKR
Sbjct: 183 RELGVKIAKAIACHKFVKAKKEAENSQAARKKKKLAWGFEAKKR 226


tr_hit_id A4BUX9
Definition tr|A4BUX9|A4BUX9_9GAMM Putative uncharacterized protein OS=Nitrococcus mobilis Nb-231
Align length 61
Score (bit) 35.8
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961855|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E21, 5'
(668 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4BUX9|A4BUX9_9GAMM Putative uncharacterized protein OS=Nitro... 36 2.5
tr|Q4X8I5|Q4X8I5_PLACH Putative uncharacterized protein (Fragmen... 35 3.2
tr|B4PTS9|B4PTS9_DROYA GE25350 OS=Drosophila yakuba GN=GE25350 P... 34 7.2
tr|A7S3T8|A7S3T8_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 9.4

>tr|A4BUX9|A4BUX9_9GAMM Putative uncharacterized protein
OS=Nitrococcus mobilis Nb-231 GN=NB231_07065 PE=4 SV=1
Length = 239

Score = 35.8 bits (81), Expect = 2.5
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1

Query: 91 VCVTAMISLNLGSLIFCIQFAINCLQPRIAERCLCARPSLRACGRWWVAVSSSDSCPLL* 270
V + A+ISL G+++ +A+ Q R AER LC+ PS C R ++ + P
Sbjct: 136 VRIVALISLGAGAVL---DYALGPYQARAAERALCSAPSCTPCSRATCYSPTATTAPTRS 192

Query: 271 W 273
W
Sbjct: 193 W 193


>tr|Q4X8I5|Q4X8I5_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC404981.00.0 PE=4 SV=1
Length = 211

Score = 35.4 bits (80), Expect = 3.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3

Query: 654 KSGLKSEGQSRGVKKPGRSTGWREANLSAKKPSRRGAGE*KRDQGYKQKGMAG 496
+ G K EG+ GVKK G +E KK G + ++G K++G G
Sbjct: 45 EEGAKKEGEEEGVKKEGEEGAKKEGEEGTKKEGEEGTKKEGEEEGTKKEGEEG 97


>tr|B4PTS9|B4PTS9_DROYA GE25350 OS=Drosophila yakuba GN=GE25350 PE=4
SV=1
Length = 1137

Score = 34.3 bits (77), Expect = 7.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3

Query: 657 EKSGLKSEGQSRGVKKPGRSTG--WREANLSAKKPSRRGAGE*KRDQGYKQ 511
E+SG + R ++P R TG WR+A A + +RR AG +RD+ ++
Sbjct: 1028 ERSGFRRNDGPRRTEEPQRETGGNWRDAPRHADRENRRTAGGERRDRDVRE 1078


>tr|A7S3T8|A7S3T8_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g24957 PE=4 SV=1
Length = 215

Score = 33.9 bits (76), Expect = 9.4
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3

Query: 657 EKSGLKSEGQSRGVKKPGRSTGWREANLSAKKPSRRGAGE*K--RDQGYKQ 511
E GL+ EG+SRG++ S G R+A K R AGE + RD+G Q
Sbjct: 13 ESQGLRDEGESRGLRNADESQGLRDA---GKSQGFRDAGESQGLRDEGESQ 60



Score = 33.9 bits (76), Expect = 9.4
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3

Query: 657 EKSGLKSEGQSRGVKKPGRSTGWREANLSAKKPSRRGAGE*K--RDQGYKQ 511
E GL+ EG+SRG++ S G R+A K R AGE + RD+G Q
Sbjct: 94 ESQGLRDEGESRGLRNADESQGLRDA---GKSQGFRDAGESQGLRDEGESQ 141