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NBDC - LSDB Archive
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DK961857
Clone id TST39A01NGRL0011_E23
Library
Length 651
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGTGGGCGCCCAACCGAATCTGTGCTTGTGATTGCGAGAAAGCAAACGAGAAGAGCGAGC
AGTAGCTGCAATCGATCACCGCGAGCTTGTGGCTATGGCGTCCGCGGTGTGCTCCTCTAG
CAGCCTCGCAGCCGTGGCAGCTTCCAGCGTGAGCAAGAGCTCCTTTGTGTCCGGACGGGC
ATTGCGAGCTGCGCCCGCAGCAGCTACGTTTGCTCCATCAAAGAGGGCCGTCACCGTTTC
GGCAGCAGCAGCCGACAGGCCTTTGTGGTTCCCCGGCAGCACTCCTCCCGAATGGCTTGA
CGGAAGCCTACCTGGGGACTTTGGTTTTGACCCCCTTGGTCTCGGATCCGAGCCTGAGCT
CCTCAAGTGGTTTGTGCAATCAGAGATAGTGCACTGCCGGTGGGCTATGTTGGGTGCTGC
TGGAATATTCATTCCAGAGGCTCTCACCAAAGCAGGAATCTTGAACACCCCATCATGGTA
CTCAGCTGGAGAGGCCGAGTACTTCACAGATACGACTACCCTCTTCGTTGTGGAGCTTAT
ATTCTTGGGTTGGGCCGAGGGCCGAAGATGGGCAGACATCATCACTCCAGGATCAGTGAA
TACTGATCCCATCTTCACCAACAACAAGCTAACAGGCACAGATGTCGGATA
■■Homology search results ■■ -
sp_hit_id P13869
Definition sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
Align length 142
Score (bit) 256.0
E-value 7.0e-68
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961857|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E23, 5'
         (651 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   256   7e-68
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   252   1e-66
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   161   3e-39
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   161   3e-39
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   133   7e-31
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   115   2e-25
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   107   5e-23
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   105   2e-22
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   104   5e-22
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   103   8e-22
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    93   1e-18
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    91   5e-18
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    80   9e-15
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...    76   2e-13
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...    75   2e-13
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    75   2e-13
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    75   4e-13
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    74   5e-13
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    74   5e-13
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...    74   9e-13
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    73   1e-12
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...    73   1e-12
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    72   2e-12
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...    72   3e-12
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    72   3e-12
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...    72   3e-12
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    72   3e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    71   4e-12
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    71   4e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    71   6e-12

>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  256 bits (654), Expect = 7e-68
 Identities = 119/142 (83%), Positives = 127/142 (89%), Gaps = 2/142 (1%)
 Frame = +2

Query: 230 VTVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRW 403
           V VSA AAD  RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGS+PE LKW  Q+E+VH RW
Sbjct: 54  VAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRW 113

Query: 404 AMLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADII 583
           AMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFTDTTTLFV+EL+ +GWAEGRRWADII
Sbjct: 114 AMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADII 173

Query: 584 TPGSVNTDPIFTNNKLTGTDVG 649
            PG VNTDPIF NNKLTGTDVG
Sbjct: 174 KPGCVNTDPIFPNNKLTGTDVG 195



 Score = 32.7 bits (73), Expect = 1.7
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG GS  P  +K     EI + R AML   G +     T  G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 246


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  252 bits (643), Expect = 1e-66
 Identities = 114/136 (83%), Positives = 122/136 (89%)
 Frame = +2

Query: 242 AAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAA 421
           AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGL S+PE L+W  Q+E+VHCRWAMLGAA
Sbjct: 60  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 119

Query: 422 GIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVN 601
           GIFIPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL+ +GWAEGRRWADII PG VN
Sbjct: 120 GIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVN 179

Query: 602 TDPIFTNNKLTGTDVG 649
           TDPIF NNKLTGTDVG
Sbjct: 180 TDPIFPNNKLTGTDVG 195



 Score = 32.7 bits (73), Expect = 1.7
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG GS  P  +K     EI + R AML   G +     T  G
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 246


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  161 bits (407), Expect = 3e-39
 Identities = 73/128 (57%), Positives = 89/128 (69%)
 Frame = +2

Query: 266 WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 445
           W PG   P +L GSLPGD GFDPLGL  +PE L+WFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 56  WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115

Query: 446 TKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTNN 625
           T  GI+N P WY+AG+ EYF  ++TLFV+E I   + E RRW DI  PGSVN DPIF   
Sbjct: 116 TSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQY 175

Query: 626 KLTGTDVG 649
            L   +VG
Sbjct: 176 SLPAGEVG 183


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  161 bits (407), Expect = 3e-39
 Identities = 73/128 (57%), Positives = 89/128 (69%)
 Frame = +2

Query: 266 WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 445
           W PG   P++L GSL GD GFDPLGL  +PE LKWFVQ+E+V+ RWAMLG AG+ +PE  
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 446 TKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTNN 625
           TK GI+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PGSVN DPIF   
Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 176

Query: 626 KLTGTDVG 649
            L   +VG
Sbjct: 177 SLPKGEVG 184


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  133 bits (335), Expect = 7e-31
 Identities = 66/129 (51%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
 Frame = +2

Query: 266 WFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEAL 445
           W PG   P +LDGSL GD GFDPL L  +PE L+WFVQ+++V+ RWAMLG AG+ IPE L
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95

Query: 446 TKAGILNTPSWYS-AGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGSVNTDPIFTN 622
           TKAG++N P W    G+  YF  ++T   V +    + E RRW DI  PGSVN DPIF +
Sbjct: 96  TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKS 154

Query: 623 NKLTGTDVG 649
             L   + G
Sbjct: 155 YSLPPHECG 163


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  115 bits (289), Expect = 2e-25
 Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
 Frame = +2

Query: 230 VTVSAAAADRPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIV 391
           V V+AAAA +  W P          PEWLDGSLPGDFGFDPLGLG +P  LKW+ ++E++
Sbjct: 48  VVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 107

Query: 392 HCRWAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEG 562
           H RWAML   GIF+ +A T  GI     W+ AG    A       TL   +L+ +GW E 
Sbjct: 108 HGRWAMLAVLGIFVGQAWT--GI----PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVES 161

Query: 563 RRWADIITPGSVNTD 607
           +RW D   P S + +
Sbjct: 162 KRWVDFFDPDSQSVE 176


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  107 bits (267), Expect = 5e-23
 Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
 Frame = +2

Query: 233 TVSAAAADRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVH 394
           TV AAAA +  W P          PEWLDGSLPGD+GFDPLGLG +P  LKW+ ++E++H
Sbjct: 45  TVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH 103

Query: 395 CRWAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEGR 565
            RWAM    GIF+ +A   +GI     W+ AG    A       TL   +LI +GW E +
Sbjct: 104 GRWAMAAVLGIFVGQAW--SGI----PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESK 157

Query: 566 RWADIITPGSVNTD 607
           RW D   P S + +
Sbjct: 158 RWVDFFDPDSQSVE 171


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  105 bits (262), Expect = 2e-22
 Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 9/135 (6%)
 Frame = +2

Query: 230 VTVSAAAADRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIV 391
           V  +AA A +  W P          PEWLDGSLPGDFGFDPLGLG +P  LKW+ ++E++
Sbjct: 43  VVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 102

Query: 392 HCRWAMLGAAGIFIPEALTKAGILNTPSWYSAGE---AEYFTDTTTLFVVELIFLGWAEG 562
           H RWAM    GIF+ +A   +GI     W+ AG    A       +L   +L+ +GW E 
Sbjct: 103 HGRWAMAAVLGIFVGQAW--SGI----PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVES 156

Query: 563 RRWADIITPGSVNTD 607
           +RW D     S + D
Sbjct: 157 KRWVDFFDNDSQSID 171


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  104 bits (259), Expect = 5e-22
 Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 15/136 (11%)
 Frame = +2

Query: 236 VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHC 397
           V     DRPLWF       +LDGSLPGD+GFDPLGL S+PE        +W    E+++ 
Sbjct: 48  VKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVING 106

Query: 398 RWAMLGAAGIFIPEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLG 550
           R+AMLGA G   PE L K G++      +W+       AG   Y+ D  TLFV+E+  +G
Sbjct: 107 RFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMG 166

Query: 551 WAEGRRWADIITPGSV 598
           +AE RR+ D   PGS+
Sbjct: 167 FAEHRRFQDWAKPGSM 182



 Score = 34.7 bits (78), Expect = 0.44
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +2

Query: 269 FPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALT 448
           F GS  P +     PG   F+PLG G + + LK     E+ + R AML   G FI   +T
Sbjct: 194 FGGSGNPAY-----PGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVT 248

Query: 449 KAG 457
             G
Sbjct: 249 GVG 251


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  103 bits (257), Expect = 8e-22
 Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 15/131 (11%)
 Frame = +2

Query: 251 ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELL------KWFVQSEIVHCRWAML 412
           A+R LWF       +LDG LPGDFGFDPLGL S+PE        KW    E+++ R+AML
Sbjct: 51  ANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAML 109

Query: 413 GAAGIFIPEALTKAGIL---NTPSWYS------AGEAEYFTDTTTLFVVELIFLGWAEGR 565
           GAAG   PE L KAG++      +W+       AG   Y+ D  TLFV+E+  +G+AE R
Sbjct: 110 GAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHR 169

Query: 566 RWADIITPGSV 598
           R+ D   PGS+
Sbjct: 170 RFQDWAKPGSM 180



 Score = 35.0 bits (79), Expect = 0.34
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D + PG   F+PLG G + + +K     EI + R AML   G FI   +T  G
Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVG 249
tr_hit_id A7QP61
Definition tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera
Align length 141
Score (bit) 265.0
E-value 2.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961857|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_E23, 5'
         (651 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genom...   265   2e-69
tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis...   265   2e-69
tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Popul...   259   1e-67
tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB...   258   2e-67
tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subs...   258   3e-67
tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein ...   258   3e-67
tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Popul...   258   3e-67
tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza...   258   3e-67
tr|B6SMV5|B6SMV5_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   257   5e-67
tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   256   6e-67
tr|Q9M320|Q9M320_ARATH Lhca2 protein OS=Arabidopsis thaliana GN=...   256   6e-67
tr|Q8VXA6|Q8VXA6_PICAB Putative chlorophyll A-B binding protein ...   256   6e-67
tr|A9NKX1|A9NKX1_PICSI Putative uncharacterized protein OS=Picea...   256   6e-67
tr|Q43485|Q43485_HORVU LHCI-680, photosystem I antenna protein O...   256   1e-66
tr|A4URF4|A4URF4_BRAJU LhCa2 protein OS=Brassica juncea PE=2 SV=2     256   1e-66
tr|B6SJV3|B6SJV3_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   255   1e-66
tr|Q41038|Q41038_PEA Type II chlorophyll a/b binding protein fro...   253   5e-66
tr|B4YYB1|B4YYB1_THEHA ST49-6 (Fragment) OS=Thellungiella haloph...   253   7e-66
tr|A9TJ06|A9TJ06_PHYPA Predicted protein OS=Physcomitrella paten...   251   3e-65
tr|B6T892|B6T892_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   250   5e-65
tr|B6TKL9|B6TKL9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   248   3e-64
tr|A9TV00|A9TV00_PHYPA Predicted protein (Fragment) OS=Physcomit...   246   9e-64
tr|A9U5E4|A9U5E4_PHYPA Predicted protein OS=Physcomitrella paten...   242   1e-62
tr|Q8RU80|Q8RU80_PINSY LHC I type II chlorophyll binding protein...   236   1e-60
tr|O22383|O22383_ORYSA Photosystem I antenna protein OS=Oryza sa...   234   4e-60
tr|A9TV02|A9TV02_PHYPA Predicted protein OS=Physcomitrella paten...   227   5e-58
tr|A9RW10|A9RW10_PHYPA Predicted protein OS=Physcomitrella paten...   227   5e-58
tr|B8B7R8|B8B7R8_ORYSI Putative uncharacterized protein OS=Oryza...   224   3e-57
tr|Q9LMB1|Q9LMB1_ARATH T29M8.2 protein OS=Arabidopsis thaliana G...   197   5e-49
tr|Q8LCQ4|Q8LCQ4_ARATH PSI type II chlorophyll a/b-binding prote...   197   5e-49

>tr|A7QP61|A7QP61_VITVI Chromosome chr1 scaffold_136, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002813001
           PE=4 SV=1
          Length = 270

 Score =  265 bits (676), Expect = 2e-69
 Identities = 124/141 (87%), Positives = 129/141 (91%), Gaps = 2/141 (1%)
 Frame = +2

Query: 233 TVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           TVSAAAAD  RPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 55  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 114

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 115 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 174

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PG VNTDPIF NNKLTGTDVG
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVG 195


>tr|A5B4F0|A5B4F0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033663 PE=4 SV=1
          Length = 272

 Score =  265 bits (676), Expect = 2e-69
 Identities = 124/141 (87%), Positives = 129/141 (91%), Gaps = 2/141 (1%)
 Frame = +2

Query: 233 TVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           TVSAAAAD  RPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE LKW VQSEIVHCRWA
Sbjct: 57  TVSAAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWA 116

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLF+VE+IF+GWAEGRRWADII 
Sbjct: 117 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDKTTLFIVEMIFIGWAEGRRWADIIK 176

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PG VNTDPIF NNKLTGTDVG
Sbjct: 177 PGCVNTDPIFPNNKLTGTDVG 197


>tr|A9PGU8|A9PGU8_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  259 bits (662), Expect = 1e-67
 Identities = 120/141 (85%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
 Frame = +2

Query: 230 VTVSAAA-ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           VTV  AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWA
Sbjct: 54  VTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWA 113

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE LTK GILNTPSWYSAGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ 
Sbjct: 114 MLGAAGIFIPEFLTKIGILNTPSWYSAGEVEYFTDTTTLFIVELFFIGWAEGRRWADILK 173

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PG VNTDPIF NNKLTGTDVG
Sbjct: 174 PGCVNTDPIFPNNKLTGTDVG 194



 Score = 35.0 bits (79), Expect = 4.0
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 245


>tr|Q40252|Q40252_LOLTE Type II LHCI OS=Lolium temulentum GN=lhaB
           PE=2 SV=1
          Length = 253

 Score =  258 bits (660), Expect = 2e-67
 Identities = 118/139 (84%), Positives = 126/139 (90%)
 Frame = +2

Query: 233 TVSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAML 412
           TV  AA +RP+WFPGSTPP WLDGSLPGDFGFDP GLGS+PE L+W VQ+E+VHCRWAML
Sbjct: 40  TVRTAAPERPIWFPGSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAML 99

Query: 413 GAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPG 592
           GAAGIFIPE LTK GILNTPSWY+AGE EYFTDTTTLFVVELI +GWAEGRRWADII PG
Sbjct: 100 GAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFVVELILIGWAEGRRWADIIKPG 159

Query: 593 SVNTDPIFTNNKLTGTDVG 649
           SVNTDPIF NNKLTGTDVG
Sbjct: 160 SVNTDPIFPNNKLTGTDVG 178



 Score = 34.7 bits (78), Expect = 5.2
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG G+  PE LK     EI + R AML   G +     T  G
Sbjct: 176 DVGYPGGLWFDPLGYGNGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 229


>tr|Q6ZL95|Q6ZL95_ORYSJ Os07g0577600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1065_B06.19-1 PE=2 SV=1
          Length = 263

 Score =  258 bits (658), Expect = 3e-67
 Identities = 116/138 (84%), Positives = 126/138 (91%)
 Frame = +2

Query: 236 VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 415
           V AAA DRP+WFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 416 AAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGS 595
           AAGIFIPE LTK GILNTPSWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG 
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGC 170

Query: 596 VNTDPIFTNNKLTGTDVG 649
           VNTDPIF NNKLTGTDVG
Sbjct: 171 VNTDPIFPNNKLTGTDVG 188


>tr|Q02070|Q02070_PINSY Type II chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaB1 PE=2 SV=1
          Length = 278

 Score =  258 bits (658), Expect = 3e-67
 Identities = 119/141 (84%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
 Frame = +2

Query: 230 VTVSAAA-ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           VTVS A   +RPLWFPG+TPP WLDGSLPGDFGFDPLGLGS+PE LKW VQ+E+VHCRWA
Sbjct: 63  VTVSQAVQTERPLWFPGNTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQAELVHCRWA 122

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE  TK GILNTPSWY+AGE EYFTD TTLFVVE+IFLGWAEGRRWADI+ 
Sbjct: 123 MLGAAGIFIPELCTKLGILNTPSWYTAGELEYFTDKTTLFVVEMIFLGWAEGRRWADILE 182

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PGSVNTDPIF NNKLTGTDVG
Sbjct: 183 PGSVNTDPIFPNNKLTGTDVG 203



 Score = 34.7 bits (78), Expect = 5.2
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 201 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTG 254


>tr|A9PGU3|A9PGU3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score =  258 bits (658), Expect = 3e-67
 Identities = 119/141 (84%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
 Frame = +2

Query: 230 VTVSAAA-ADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           VTV  AA  DRPLWFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWA
Sbjct: 54  VTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWA 113

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTDTTTLF+VEL F+GWAEGRRWADI+ 
Sbjct: 114 MLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADILK 173

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PG VNTDPIF NNKLTGTDVG
Sbjct: 174 PGCVNTDPIFPNNKLTGTDVG 194



 Score = 35.0 bits (79), Expect = 4.0
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 299 DGSLPGDFGFDPLGLGS-EPELLKWFVQSEIVHCRWAMLGAAGIFIPEALTKAG 457
           D   PG   FDPLG GS  PE +K     EI + R AML   G +     T  G
Sbjct: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTG 245


>tr|A2YMZ1|A2YMZ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26600 PE=4 SV=1
          Length = 263

 Score =  258 bits (658), Expect = 3e-67
 Identities = 116/138 (84%), Positives = 126/138 (91%)
 Frame = +2

Query: 236 VSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAMLG 415
           V AAA DRP+WFPGSTPP WLDGSLPGDFGFDPLGLGS+PE L+W VQ+E+VHCRWAMLG
Sbjct: 51  VRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLG 110

Query: 416 AAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITPGS 595
           AAGIFIPE LTK GILNTPSWY+AGE +YFTDTTTLF++ELI +GWAEGRRWADII PG 
Sbjct: 111 AAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGC 170

Query: 596 VNTDPIFTNNKLTGTDVG 649
           VNTDPIF NNKLTGTDVG
Sbjct: 171 VNTDPIFPNNKLTGTDVG 188


>tr|B6SMV5|B6SMV5_MAIZE Chlorophyll a-b binding protein OS=Zea mays
           PE=2 SV=1
          Length = 256

 Score =  257 bits (656), Expect = 5e-67
 Identities = 121/141 (85%), Positives = 127/141 (90%), Gaps = 2/141 (1%)
 Frame = +2

Query: 233 TVSAAAAD--RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWA 406
           +V A AAD  RP+WFPGSTPPEWLDGSLPGDFGFDPLGL S+PE LKW VQ+EIVHCRWA
Sbjct: 41  SVRAVAADPERPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPESLKWNVQAEIVHCRWA 100

Query: 407 MLGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIIT 586
           MLGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLFVVELI +GWAEGRRWADII 
Sbjct: 101 MLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIK 160

Query: 587 PGSVNTDPIFTNNKLTGTDVG 649
           PGSVNTDPIF NNKLTGTDVG
Sbjct: 161 PGSVNTDPIFPNNKLTGTDVG 181


>tr|Q9SYW8|Q9SYW8_ARATH Lhca2 protein OS=Arabidopsis thaliana
           GN=Lhca2 PE=2 SV=1
          Length = 257

 Score =  256 bits (655), Expect = 6e-67
 Identities = 118/140 (84%), Positives = 125/140 (89%)
 Frame = +2

Query: 230 VTVSAAAADRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSEPELLKWFVQSEIVHCRWAM 409
           V   AA  DRP+WFPGSTPPEWLDGSLPGDFGFDPLGL S+P+ LKW VQ+EIVHCRWAM
Sbjct: 43  VRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAM 102

Query: 410 LGAAGIFIPEALTKAGILNTPSWYSAGEAEYFTDTTTLFVVELIFLGWAEGRRWADIITP 589
           LGAAGIFIPE LTK GILNTPSWY+AGE EYFTD TTLFVVELI +GWAEGRRWADII P
Sbjct: 103 LGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKP 162

Query: 590 GSVNTDPIFTNNKLTGTDVG 649
           GSVNTDP+F NNKLTGTDVG
Sbjct: 163 GSVNTDPVFPNNKLTGTDVG 182