BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961863|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_F05, 5'
         (656 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis el...    33   1.0  

>sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis
           elegans GN=hlh-8 PE=1 SV=2
          Length = 178

 Score = 33.5 bits (75), Expect = 1.0
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 321 ACMHQWRGGGGDAPLISAYSNQLPPLISQKLCPPLQATI---CISPLP 187
           +  + WRG  G  P+  A  +QLPPL S  + PP  ++I   C+ P P
Sbjct: 97  SAFNMWRGNNGYTPI--AGPSQLPPLQSAHIPPPAPSSIPPHCLMPQP 142

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961863|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_F05, 5'
         (656 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6AL37|Q6AL37_DESPS Probable NADH dehydrogenase (Ubiquinone) ...    39   0.28 
tr|A9SC31|A9SC31_PHYPA Predicted protein (Fragment) OS=Physcomit...    35   4.0  

>tr|Q6AL37|Q6AL37_DESPS Probable NADH dehydrogenase (Ubiquinone) I,
           chain F OS=Desulfotalea psychrophila GN=DP2209 PE=4 SV=1
          Length = 550

 Score = 38.9 bits (89), Expect = 0.28
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
 Frame = -3

Query: 612 CVGNCKQFPWLSIGAKTLLYTGCGPLYNSRAERIHDYM---PISHLCC-----FSNKPR- 460
           C+G C   P +++ +K +LY GCGP   +  E I D +   P  HL C     F NK R 
Sbjct: 66  CLGLCSAGPLVALASKNVLYQGCGP---ADVETILDALGGAPAKHLLCSSDIPFFNKQRK 122

Query: 459 --YEYC 448
              EYC
Sbjct: 123 VVLEYC 128


>tr|A9SC31|A9SC31_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_52198 PE=4 SV=1
          Length = 144

 Score = 35.0 bits (79), Expect = 4.0
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -1

Query: 335 PELILHVCINGVVVVVMPLSFLLIQISSLHSSAKSSVPHFKQPSVFPLCQQNPARFVQNP 156
           P L+L+ C +   + + P S LL  IS+LH    + +PHF+ PS+   C  + +  +  P
Sbjct: 32  PSLVLN-CYSSFPISI-PCSHLLFLISNLHPLFPTPIPHFQSPSLVLNCYSSFS--ISIP 87

Query: 155 CSR 147
           CS+
Sbjct: 88  CSQ 90