DK961919
Clone id TST39A01NGRL0011_H13
Library
Length 782
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_H13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGCGACTTTGGTGGCGGGGACGAGCCGGGGAGCATGGCATCTCTTGTGAAAGCTCCTGCA
TCCCCGTGCACCGCTTCCACCACTGCTCATTTCCAGCAGAGTCTACCGCAGCAGAGTCGG
AGTTTGCCATTCTTGAGTCGCTCTGGCACAGGCTTAGCACTCTCCTCCAGTGCCTATCAG
TGTAGCAGTTCAAAGTCTTCATTTGTGGGACTCCAAACAAAGCTTGAGAATCTCATCTTG
CATTCGTCTTCAGCCACTGGATCGGGCAGTACCCGGGCAGTAGTTTCCATGTCAAAACCA
GTTATTCAGTTTATCAAAGGCGTGAACGAGCAAACTATTCCTGATGTTTCTCTTACAAGA
TCTAAAGATGGGACTAATGGAGTTGCAACTTTTAGCTTTGAGCAGCCGTCAGTTTTTGAT
GCTGCTGGAGAGTTGAGGGACATCACAGGGCTTTTCATGCAAGATGAAGAGGGTGTTCTT
TCAACAGTTGATGTCAGTGCCAAGTTTGTTAACGGAAAACCTTCAAGGATTGAGGCTCGG
TACATAATGAGAACATTGAAGGACTGGGACAGGTTCATGCGCTTCATGGAGAGATATGCC
GAAGCCAATGGTCTTGGATTTGTGAAGAAGTGAATAGCAGAGCCTGTGTTTTTTTTGACA
TCCTTTCTGCACCTTGTGCCTTATACTCAATTTCAAGAGGGAATATAATGGTAATTCTCC
ATGGTAATTTTGGAAAAAAAAGTTGGAGTATTTGCAATTGGCAAAAAAAAAAAAAAAAAA
AA
■■Homology search results ■■ -
sp_hit_id Q0JG75
Definition sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica
Align length 117
Score (bit) 176.0
E-value 1.0e-43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961919|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_H13, 5'
(762 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 prote... 176 1e-43
sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 prote... 166 2e-40
sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 prote... 149 2e-35
sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 prote... 140 8e-33
sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center psb28 prote... 135 2e-31
sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center psb28 prote... 135 2e-31
sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 prote... 135 3e-31
sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 prote... 134 5e-31
sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 prote... 133 9e-31
sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 prote... 133 1e-30
sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 prote... 133 1e-30
sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 prote... 133 1e-30
sp|P49508|PSB28_ODOSI Photosystem II reaction center psb28 prote... 131 4e-30
sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 prote... 131 5e-30
sp|Q8DLJ8|PSB28_THEEB Photosystem II reaction center psb28 prote... 126 1e-28
sp|Q3AKD0|PSB28_SYNSC Photosystem II reaction center psb28 prote... 124 7e-28
sp|Q7U7C0|PSB28_SYNPX Photosystem II reaction center psb28 prote... 122 2e-27
sp|Q9TLZ2|PSB28_CYACA Photosystem II reaction center psb28 prote... 122 3e-27
sp|Q85G21|PSB28_CYAME Photosystem II reaction center psb28 prote... 121 4e-27
sp|Q3MFL9|PSB28_ANAVT Photosystem II reaction center psb28 prote... 121 4e-27
sp|Q8YYP5|PSB28_ANASP Photosystem II reaction center psb28 prote... 120 6e-27
sp|A5GLG6|PSB28_SYNPW Photosystem II reaction center psb28 prote... 120 8e-27
sp|Q0I9T4|PSB28_SYNS3 Photosystem II reaction center psb28 prote... 119 1e-26
sp|A2CA72|PSB28_PROM3 Photosystem II reaction center psb28 prote... 116 2e-25
sp|Q3AXG3|PSB28_SYNS9 Photosystem II reaction center psb28 prote... 114 5e-25
sp|Q7TV11|PSB28_PROMM Photosystem II reaction center psb28 prote... 114 5e-25
sp|Q112E8|PSB28_TRIEI Photosystem II reaction center psb28 prote... 114 8e-25
sp|Q55356|PSB28_SYNY3 Photosystem II reaction center psb28 prote... 112 2e-24
sp|Q7VCG9|PSB28_PROMA Photosystem II reaction center psb28 prote... 110 8e-24
sp|A2BWQ5|PSB28_PROM5 Photosystem II reaction center psb28 prote... 106 1e-22

>sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein,
chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28
PE=2 SV=2
Length = 180

Score = 176 bits (446), Expect = 1e-43
Identities = 82/117 (70%), Positives = 103/117 (88%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 protein,
chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1
Length = 183

Score = 166 bits (419), Expect = 2e-40
Identities = 76/117 (64%), Positives = 99/117 (84%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
+ M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 66 ITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 125

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
DEEGV+ + DV+A+FVNGKP I A++IMR+ K+WDRFMRFMERY++ NGL FVKK
Sbjct: 126 IDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVKK 182


>sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 protein,
chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1
Length = 147

Score = 149 bits (376), Expect = 2e-35
Identities = 73/109 (66%), Positives = 86/109 (78%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 483
IQF+KG NE +P+V LTRSKDG+NG A F F P VF+ DITG+F+ DEEG +S
Sbjct: 41 IQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENGQG--DITGMFLTDEEGEMS 98

Query: 484 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
TVDV+AKFVNGKP+ IEARY+M+T DW+RFMRFMERYAE NGLGF KK
Sbjct: 99 TVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFMERYAEDNGLGFSKK 147


>sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 protein
OS=Guillardia theta GN=psb28 PE=3 SV=1
Length = 116

Score = 140 bits (353), Expect = 8e-33
Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Frame = +1

Query: 301 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 477
VIQFI+GVNE IPDV LTRS+DG+ G ATF F P V +A ++ +ITG+++ DEEG
Sbjct: 3 VIQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQ 62

Query: 478 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
L T DV+A+FVNGKP IEA YIM++ +DWDRFMRFMERY+E NGL F K
Sbjct: 63 LVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK 112


>sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center psb28 protein
OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=psb28 PE=3 SV=1
Length = 112

Score = 135 bits (340), Expect = 2e-31
Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 480
IQF +G++E +PDV LTRS+DG NG ATF F++P GE+R DITG+++ D+EG L
Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62

Query: 481 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
+T +V AKF+NG+P+ +EA Y+MR+ ++WDRFMRFM+RYAEANGLGF +
Sbjct: 63 ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111


>sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center psb28 protein
OS=Synechococcus elongatus (strain PCC 7942) GN=psb28
PE=3 SV=1
Length = 112

Score = 135 bits (340), Expect = 2e-31
Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 480
IQF +G++E +PDV LTRS+DG NG ATF F++P GE+R DITG+++ D+EG L
Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62

Query: 481 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
+T +V AKF+NG+P+ +EA Y+MR+ ++WDRFMRFM+RYAEANGLGF +
Sbjct: 63 ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111


>sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 protein
OS=Acaryochloris marina (strain MBIC 11017) GN=psb28
PE=3 SV=1
Length = 111

Score = 135 bits (339), Expect = 3e-31
Identities = 66/108 (61%), Positives = 88/108 (81%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 483
IQFI+GV+E+ IPDV LTR+KDG++G A F FE P++ G+L ++ G+++QDEEG L+
Sbjct: 5 IQFIRGVDEEVIPDVRLTRAKDGSSGRAIFYFENPNLIQE-GKL-EVMGMYLQDEEGELT 62

Query: 484 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
T+DVSAKFVNGKP IEA Y M++ ++WDRFMRFM RYAE++GLGF K
Sbjct: 63 TLDVSAKFVNGKPHAIEANYDMKSEEEWDRFMRFMNRYAESHGLGFSK 110


>sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 protein
OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1
Length = 115

Score = 134 bits (337), Expect = 5e-31
Identities = 64/109 (58%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFD-AAGELRDITGLFMQDEEGVL 480
IQFIKG++E+ +PDV LTRSKDG+ G ATF F+ P++ D + +ITG+++ DEEG+L
Sbjct: 5 IQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGIL 64

Query: 481 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
T DV+A+FVNGKP IE+ YIM++ + WDRFMRFMERY E NGL F K
Sbjct: 65 ETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGLVFSK 113


>sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 protein
OS=Gracilaria tenuistipitata var. liui GN=psb28 PE=3
SV=1
Length = 114

Score = 133 bits (335), Expect = 9e-31
Identities = 63/110 (57%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = +1

Query: 301 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 477
VIQFIKG+NE + DVSLTRS+DG+ G ATF F P + + E + DITG++++D+EG
Sbjct: 3 VIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGE 62

Query: 478 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
L T DVSAKF+NGKP +EA YI+++ ++WDRFMRFME+YA N L F K
Sbjct: 63 LMTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFMEKYANENKLSFTK 112


>sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 protein
OS=Thalassiosira pseudonana GN=psb28 PE=3 SV=1
Length = 114

Score = 133 bits (334), Expect = 1e-30
Identities = 63/109 (57%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Frame = +1

Query: 304 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 480
IQFIKG++E+ +PDV LTRS+DG+ G ATF F+ ++ + + L +ITG++M DEEG+L
Sbjct: 5 IQFIKGIDEKVLPDVRLTRSRDGSTGTATFLFKNANLINKSLALNGEITGMYMIDEEGIL 64

Query: 481 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
T DVSA+FVNGKP +E+ YIM++ + WDRFMRFMERY E+NGL F K
Sbjct: 65 ETRDVSARFVNGKPQAVESIYIMKSPEAWDRFMRFMERYGESNGLAFTK 113


tr_hit_id A9NPG6
Definition tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein OS=Picea sitchensis
Align length 117
Score (bit) 179.0
E-value 1.0e-43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961919|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_H13, 5'
(762 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 prot... 179 1e-43
tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein ... 179 2e-43
tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein ... 179 2e-43
tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 prot... 176 1e-42
tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 prot... 176 2e-42
tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 prot... 176 2e-42
tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 prot... 175 3e-42
tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 prot... 170 1e-40
tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein ... 166 2e-39
tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 prot... 165 4e-39
tr|A4S851|A4S851_OSTLU Photosystem II reaction center psb28 prot... 153 1e-35
tr|A8III5|A8III5_CHLRE Photosystem II reaction center psb28 prot... 148 3e-34
tr|B8C304|B8C304_THAPS Nuclear copy of photosystem II protein ps... 138 5e-31
tr|A6MVQ3|A6MVQ3_RHDSA Photosystem II reaction center psb28 prot... 133 1e-29
tr|B4W337|B4W337_9CYAN Photosystem II reaction center protein Ps... 130 7e-29
tr|B7FMR0|B7FMR0_MEDTR Putative uncharacterized protein OS=Medic... 128 5e-28
tr|B1WXW2|B1WXW2_CYAA5 Photosystem II 13 kD protein OS=Cyanothec... 127 8e-28
tr|A3IN21|A3IN21_9CHRO Photosystem II reaction center psb28 prot... 127 8e-28
tr|B2J5G7|B2J5G7_NOSP7 Photosystem II protein PsbW, class I OS=N... 127 1e-27
tr|Q4BX83|Q4BX83_CROWT Photosystem II reaction center psb28 prot... 126 1e-27
tr|B7T1U3|B7T1U3_VAULI Photosystem II protein OS=Vaucheria litor... 125 3e-27
tr|A3YZV7|A3YZV7_9SYNE Photosystem II reaction center psb28 prot... 124 5e-27
tr|A0YUC0|A0YUC0_9CYAN Photosystem II reaction center psb28 prot... 124 9e-27
tr|B5W4B0|B5W4B0_SPIMA Photosystem II reaction center protein Ps... 122 2e-26
tr|B1XL01|B1XL01_SYNP2 Photosystem II reaction center W protein ... 122 3e-26
tr|B4WSH1|B4WSH1_9SYNE Photosystem II reaction center protein Ps... 120 8e-26
tr|B2XTK0|B2XTK0_HETA4 Photosystem II protein psb28 OS=Heterosig... 120 1e-25
tr|B2XT44|B2XT44_HETA2 Photosystem II protein psb28 OS=Heterosig... 120 1e-25
tr|B1X424|B1X424_PAUCH Putative photosystem II reaction center P... 120 1e-25
tr|A4CU97|A4CU97_SYNPV Photosystem II reaction center psb28 prot... 119 2e-25

>tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein
OS=Picea sitchensis PE=2 SV=1
Length = 202

Score = 179 bits (455), Expect = 1e-43
Identities = 87/117 (74%), Positives = 102/117 (87%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V MSKPVIQFI+G NEQ+IPDV LT+S+DGT G+ATFSF+QPSVFD++ EL DITGL+M
Sbjct: 86 VTMMSKPVIQFIQGTNEQSIPDVKLTKSRDGTIGMATFSFDQPSVFDSSRELGDITGLYM 145

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
DEEGVL +VDV+AKFVNGKPS IEARYIMR+ +WDRFMRFMERY+ NGL F+KK
Sbjct: 146 IDEEGVLQSVDVNAKFVNGKPSTIEARYIMRSPPEWDRFMRFMERYSNENGLQFIKK 202


>tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 179

Score = 179 bits (453), Expect = 2e-43
Identities = 84/116 (72%), Positives = 102/116 (87%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V + +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 63 VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 122

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFMERY++ANGL FVK
Sbjct: 123 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 178


>tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 180

Score = 179 bits (453), Expect = 2e-43
Identities = 84/116 (72%), Positives = 102/116 (87%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V + +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 64 VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 123

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFMERY++ANGL FVK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 179


>tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 protein
OS=Populus trichocarpa PE=2 SV=1
Length = 181

Score = 176 bits (447), Expect = 1e-42
Identities = 81/117 (69%), Positives = 101/117 (86%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V M KP IQF++G +EQT+PDV LT+S+DGTNG+A F+F+QPSVFD++ E+ DITG +M
Sbjct: 65 VTMMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYM 124

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
DEEG+L +VDV+AKFVNGKP RIEA+YIMRT ++WDRFMRFME+YA ANGL FVKK
Sbjct: 125 IDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMEKYANANGLQFVKK 181


>tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 protein
OS=Oryza sativa subsp. japonica GN=OsJ_004602 PE=2 SV=1
Length = 180

Score = 176 bits (446), Expect = 2e-42
Identities = 82/117 (70%), Positives = 103/117 (88%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 protein
OS=Oryza sativa subsp. indica GN=OsI_05122 PE=3 SV=1
Length = 180

Score = 176 bits (446), Expect = 2e-42
Identities = 82/117 (70%), Positives = 103/117 (88%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 protein
OS=Vitis vinifera GN=GSVIVT00028499001 PE=3 SV=1
Length = 179

Score = 175 bits (444), Expect = 3e-42
Identities = 81/117 (69%), Positives = 100/117 (85%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
+ M KP IQFI+G +EQT+PDV LT+S+DGTNG+A F FEQPSVFD++GE+ DITG +M
Sbjct: 63 ITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGFYM 122

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
DEEGVL +VDVSAKF+NGKPS IEA+Y+MR+ ++WDRFMRFMERY+ NGL FVKK
Sbjct: 123 IDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVKK 179


>tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_61027 PE=3 SV=1
Length = 115

Score = 170 bits (430), Expect = 1e-40
Identities = 80/111 (72%), Positives = 98/111 (88%)
Frame = +1

Query: 295 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 474
KPV+QFI+GV+E+++P++ LTRS DGTNG A F F+QPSVFD++ EL DITGL+M DEEG
Sbjct: 4 KPVLQFIRGVDERSVPEIRLTRSPDGTNGKAIFVFDQPSVFDSSRELGDITGLYMLDEEG 63

Query: 475 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
VLSTVDVSAKF+NGKPS+IE++YIMR +WDRFMRFMERYA+ N LGFVK
Sbjct: 64 VLSTVDVSAKFLNGKPSKIESQYIMRNTTEWDRFMRFMERYAKENQLGFVK 114


>tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 185

Score = 166 bits (420), Expect = 2e-39
Identities = 76/117 (64%), Positives = 99/117 (84%)
Frame = +1

Query: 280 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 459
+ M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 68 ITMMVKPTLQFIQGTDELTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 127

Query: 460 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 630
DEEGV+ + DV+A+FVNGKP I A+++MRT K+WDRFMRFMERY++ NGL FVKK
Sbjct: 128 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 184


>tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_57848 PE=3 SV=1
Length = 115

Score = 165 bits (417), Expect = 4e-39
Identities = 77/111 (69%), Positives = 96/111 (86%)
Frame = +1

Query: 295 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 474
KPVIQFI+GV+E+ +P++ LTRS +GTNG A F F+QPSVFDA+ EL DITGL++ DEEG
Sbjct: 4 KPVIQFIRGVDERVVPEIRLTRSPNGTNGKAIFVFDQPSVFDASRELGDITGLYLVDEEG 63

Query: 475 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 627
LSTV+VSAKF+NGKPS+IE++Y+MR +WDRFMRFMERYA+ N LGFVK
Sbjct: 64 TLSTVEVSAKFLNGKPSKIESQYVMRNTTEWDRFMRFMERYAKENQLGFVK 114