DK961923 |
Clone id |
TST39A01NGRL0011_H17 |
Library |
TST39 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_H17. 5' end sequence. |
Accession |
DK961923 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2822Contig1 |
Sequence |
AGAAAGTCCACGTTCTTTCTCAAATTGCCTGAGCTAATCGAATGGATTCTACCCTCCTGT CACCTTCCTCTGCCTTCCTATCCCTTGCCAACACAAGCCATGGAGAGCTCCGTTCCAGTA GGAGACGGAGCTTCTTTGCATGTCCTGCCAAGTCTATCATTTGTGGAATAGCAGAGCCCT CGGGAGAGCCCGCTCCCATGGGGCAGAAGACCAAGTACAAAGACAGTTTCTTTGACAGAG CATTTATGAGCCTCTTTGCAAGAAAAATGGCGAACGTTACAGGAACTTCTGGCAAGATAA ATGGATATGAAGACTTTGTGGATGTTTCAAGGGAAGTGATGAAAGGCCGAAATCCACCTC AACAAAAGGAGGCTGTTCGAAGTGTTTTACTTTCCATACTACCACCCGGAGCCCCTGCTA CTTTTCGGAAGCTTTTCCCACCAACAAAATGGTCAGCTGAAATCAATGCAGCTATTACAG TTCCCTTTTTCTACTGGCTTGTTGGACCATCAGAGCTGATGGAGGTTGAGGTGAATGGAG TCAAACAGAAAAGTGGTGTTCACATCAAGAAGTGCAGGTACATAGAGTACAGTGGATGTG TGGGAATGTGTGTAAACATGTGCAAACTCCCGACGCAAGATTTCTTCACAAATGATTTTG GCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q90584 |
Definition |
sp|Q90584|COHA1_CHICK Collagen alpha-1(XVII) chain OS=Gallus gallus |
Align length |
87 |
Score (bit) |
33.1 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NSC3 |
Definition |
tr|A9NSC3|A9NSC3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
184 |
Score (bit) |
281.0 |
E-value |
2.0e-74 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961923|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_H17, 5' (646 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NSC3|A9NSC3_PICSI Putative uncharacterized protein OS=Picea... 281 2e-74 tr|A9RFF4|A9RFF4_PHYPA Predicted protein OS=Physcomitrella paten... 261 3e-68 tr|Q9SGU7|Q9SGU7_ARATH F1N19.25 (Putative uncharacterized protei... 253 5e-66 tr|A7QJ53|A7QJ53_VITVI Chromosome chr2 scaffold_105, whole genom... 251 3e-65 tr|Q6YXS1|Q6YXS1_ORYSJ Os08g0114100 protein OS=Oryza sativa subs... 232 2e-59 tr|A2YQM2|A2YQM2_ORYSI Putative uncharacterized protein OS=Oryza... 232 2e-59 tr|B6SUT9|B6SUT9_MAIZE Putative uncharacterized protein OS=Zea m... 224 3e-57 tr|B6SPJ8|B6SPJ8_MAIZE Putative uncharacterized protein OS=Zea m... 224 3e-57 tr|A9SKY4|A9SKY4_PHYPA Predicted protein OS=Physcomitrella paten... 183 9e-45 tr|B0BYN8|B0BYN8_ACAM1 Putative uncharacterized protein OS=Acary... 171 3e-41 tr|A8J8P6|A8J8P6_CHLRE Predicted protein OS=Chlamydomonas reinha... 170 8e-41 tr|A3BP14|A3BP14_ORYSJ Putative uncharacterized protein OS=Oryza... 160 5e-38 tr|B4WK17|B4WK17_9SYNE Putative uncharacterized protein OS=Synec... 157 5e-37 tr|A4S7S1|A4S7S1_OSTLU Predicted protein (Fragment) OS=Ostreococ... 133 8e-30 tr|A9SAD4|A9SAD4_PHYPA Predicted protein (Fragment) OS=Physcomit... 130 7e-29 tr|Q00UY7|Q00UY7_OSTTA F1N19.25 (ISS) OS=Ostreococcus tauri GN=O... 125 2e-27 tr|Q2R1Y5|Q2R1Y5_ORYSJ Putative uncharacterized protein OS=Oryza... 122 1e-26 tr|Q7XA78|Q7XA78_ARATH At1g03051 OS=Arabidopsis thaliana GN=At1g... 120 9e-26 tr|B8BLE6|B8BLE6_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|B6U1U8|B6U1U8_MAIZE Putative uncharacterized protein OS=Zea m... 116 1e-24 tr|A8IC34|A8IC34_CHLRE Predicted protein OS=Chlamydomonas reinha... 116 1e-24 tr|A4S0X2|A4S0X2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 115 2e-24 tr|Q014B2|Q014B2_OSTTA Homology to unknown gene OS=Ostreococcus ... 111 3e-23 tr|A7PUI8|A7PUI8_VITVI Chromosome chr7 scaffold_31, whole genome... 107 5e-22 tr|Q8DHK7|Q8DHK7_THEEB Tll1942 protein OS=Thermosynechococcus el... 104 5e-21 tr|Q65XT7|Q65XT7_ORYSJ Os05g0131100 protein OS=Oryza sativa subs... 100 1e-19 tr|Q8W4C4|Q8W4C4_ARATH Putative uncharacterized protein OS=Arabi... 99 2e-19 tr|A9NQE7|A9NQE7_PICSI Putative uncharacterized protein OS=Picea... 94 5e-18 tr|B7FP85|B7FP85_PHATR Predicted protein OS=Phaeodactylum tricor... 89 3e-16 tr|A7Q0P5|A7Q0P5_VITVI Chromosome chr7 scaffold_42, whole genome... 89 3e-16
>tr|A9NSC3|A9NSC3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 275
Score = 281 bits (719), Expect = 2e-74 Identities = 134/184 (72%), Positives = 154/184 (83%), Gaps = 3/184 (1%) Frame = +3
Query: 102 RRRSFFACPAKSII-CGIAEPSGEPAPMGQKTKYKDSFFDRAFMSLFARKMANVTG--TS 272 R+ F K II CGIAEPSG+PAPMGQKT+Y D+ FD+ FM+LFARKM N+ G ++ Sbjct: 29 RKNHSFGLRRKMIIECGIAEPSGQPAPMGQKTRYNDNLFDKVFMALFARKMNNIAGGKST 88
Query: 273 GKINGYEDFVDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINA 452 G+ GYE FV+ SR VM GR P QQ+EAVR VLLS+LPPGAP FRKLFPPTKW+AE NA Sbjct: 89 GREEGYERFVETSRSVMLGRTPKQQQEAVRQVLLSMLPPGAPERFRKLFPPTKWAAEFNA 148
Query: 453 AITVPFFYWLVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFT 632 A+T PFF+WLVGPSE++EVEVNGVKQKSGVHIKKCRY+E SGCVGMCVNMCKLPTQDFFT Sbjct: 149 AVTAPFFHWLVGPSEVVEVEVNGVKQKSGVHIKKCRYLENSGCVGMCVNMCKLPTQDFFT 208
Query: 633 NDFG 644 N+FG Sbjct: 209 NEFG 212
>tr|A9RFF4|A9RFF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_62234 PE=4 SV=1 Length = 269
Score = 261 bits (667), Expect = 3e-68 Identities = 123/188 (65%), Positives = 147/188 (78%), Gaps = 3/188 (1%) Frame = +3
Query: 90 LRSSRRRSFFACPAKS---IICGIAEPSGEPAPMGQKTKYKDSFFDRAFMSLFARKMANV 260 L+SSR F + CG+AEPSG+PAP GQ T+Y D+ D+AF++LF RKM Sbjct: 17 LKSSRNHEHFLARDSRPHRVRCGVAEPSGKPAPFGQITRYNDNILDKAFIALFRRKMEAN 76
Query: 261 TGTSGKINGYEDFVDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSA 440 G + K+ GYE FVDVS+++M+GR +Q+ VR VLLS+LPPGAPA FRKLFPPTKWSA Sbjct: 77 LGKTSKMQGYEGFVDVSKKIMQGRTAVEQRAVVRDVLLSLLPPGAPAQFRKLFPPTKWSA 136
Query: 441 EINAAITVPFFYWLVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQ 620 E NAA+TVPFF WLVGP+ELME+EVNGVKQ SGV I KCRY+E SGCVGMCVNMCK+PTQ Sbjct: 137 EFNAAVTVPFFQWLVGPAELMEIEVNGVKQMSGVKITKCRYLENSGCVGMCVNMCKIPTQ 196
Query: 621 DFFTNDFG 644 DFFTN+FG Sbjct: 197 DFFTNEFG 204
>tr|Q9SGU7|Q9SGU7_ARATH F1N19.25 (Putative uncharacterized protein At1g64680) (At1g64680) OS=Arabidopsis thaliana GN=At1g64680 PE=2 SV=1 Length = 250
Score = 253 bits (647), Expect = 5e-66 Identities = 122/179 (68%), Positives = 142/179 (79%), Gaps = 8/179 (4%) Frame = +3
Query: 132 KSIICGIAEPSGEPAPMGQKTKYKDSFFDRAFMSLFARKMANVTGTSGKIN--------G 287 +S CGIAEPSGEPAPMG KT+Y+D +R FM LFARKM K Sbjct: 17 RSTRCGIAEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD 76
Query: 288 YEDFVDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVP 467 YE FV+VS+ VM+GR+ QQ+EAVR VLLS+LPPGAP FRKLFPPTKW+AE NAA+TVP Sbjct: 77 YESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVP 136
Query: 468 FFYWLVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 FF+WLVGPS+++EVEVNGVKQ+SGV IKKCRY+E SGCVGMCVNMCK+PTQDFFTN+FG Sbjct: 137 FFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFG 195
>tr|A7QJ53|A7QJ53_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000511001 PE=4 SV=1 Length = 266
Score = 251 bits (641), Expect = 3e-65 Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 11/195 (5%) Frame = +3
Query: 93 RSSRRRSFFACPAKSIICGIAEPSGEPAPMGQKTKYKDSFFDRAFMSLFARKMANV---- 260 RS RR + CGIAEPSGEPAP GQKT+Y D FF++ FM+LFARKM Sbjct: 17 RSLPRRRSSTGYINIVRCGIAEPSGEPAPFGQKTRYNDGFFEKVFMTLFARKMGRFAAPA 76
Query: 261 -TGTSGKIN------GYEDFVDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLF 419 +G + YE FVDVS+ VM+GR+ QQ+E VR VLLS+LPPGAP FRKLF Sbjct: 77 KSGIEAEKKRSWWDCDYERFVDVSKRVMQGRSRMQQQEVVREVLLSMLPPGAPDQFRKLF 136
Query: 420 PPTKWSAEINAAITVPFFYWLVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVN 599 PPT+W+AE NAA TVPFF WLVGPSE++EVEVNGVKQ+SGV IKKCRY+E SGCVGMCVN Sbjct: 137 PPTRWAAEFNAAFTVPFFAWLVGPSEVVEVEVNGVKQRSGVLIKKCRYLENSGCVGMCVN 196
Query: 600 MCKLPTQDFFTNDFG 644 MCK+PTQDFFTN+FG Sbjct: 197 MCKIPTQDFFTNEFG 211
>tr|Q6YXS1|Q6YXS1_ORYSJ Os08g0114100 protein OS=Oryza sativa subsp. japonica GN=P0427G12.10 PE=4 SV=1 Length = 261
Score = 232 bits (591), Expect = 2e-59 Identities = 116/175 (66%), Positives = 135/175 (77%), Gaps = 17/175 (9%) Frame = +3
Query: 171 PAPMGQKTKYKDSFFDRAFMSLFARKM---ANVTGTSGKIN--------------GYEDF 299 PAPMG+KT+Y+D +RAFM LFARKM A V+ + GK YE F Sbjct: 32 PAPMGEKTEYRDGPVERAFMGLFARKMEKYAVVSSSGGKGKEKKKEKSSRSVWEWDYESF 91
Query: 300 VDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYW 479 VDVSR VM GR QQ+EAVR VLLS+LPPGAP F+KLFPPT+W+ E NAA+TVPFF+W Sbjct: 92 VDVSRRVMVGRTRAQQQEAVREVLLSMLPPGAPEQFKKLFPPTRWACEFNAALTVPFFHW 151
Query: 480 LVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 LVGPSE++EVEVNGVKQKSGV IKKCRY+E SGCVGMCVNMCK+PTQ+FFTN+FG Sbjct: 152 LVGPSEVVEVEVNGVKQKSGVLIKKCRYLENSGCVGMCVNMCKIPTQNFFTNEFG 206
>tr|A2YQM2|A2YQM2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27588 PE=4 SV=1 Length = 261
Score = 232 bits (591), Expect = 2e-59 Identities = 116/175 (66%), Positives = 135/175 (77%), Gaps = 17/175 (9%) Frame = +3
Query: 171 PAPMGQKTKYKDSFFDRAFMSLFARKM---ANVTGTSGKIN--------------GYEDF 299 PAPMG+KT+Y+D +RAFM LFARKM A V+ + GK YE F Sbjct: 32 PAPMGEKTEYRDGPVERAFMGLFARKMEKYAVVSSSGGKGKEKKKEKSSRSVWEWDYESF 91
Query: 300 VDVSREVMKGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYW 479 VDVSR VM GR QQ+EAVR VLLS+LPPGAP F+KLFPPT+W+ E NAA+TVPFF+W Sbjct: 92 VDVSRRVMVGRTRAQQQEAVREVLLSMLPPGAPEQFKKLFPPTRWACEFNAALTVPFFHW 151
Query: 480 LVGPSELMEVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 LVGPSE++EVEVNGVKQKSGV IKKCRY+E SGCVGMCVNMCK+PTQ+FFTN+FG Sbjct: 152 LVGPSEVVEVEVNGVKQKSGVLIKKCRYLENSGCVGMCVNMCKIPTQNFFTNEFG 206
>tr|B6SUT9|B6SUT9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 265
Score = 224 bits (572), Expect = 3e-57 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 10/167 (5%) Frame = +3
Query: 174 APMGQKTKYKDSFFDRAFMSLFARKMANVTGTSGKING----------YEDFVDVSREVM 323 APMG+KT+Y+D +RAFM LFARKM YE FVDVSR VM Sbjct: 45 APMGEKTEYRDGPLERAFMGLFARKMEKYAAKKPAAQAKEERAVWEWDYESFVDVSRRVM 104
Query: 324 KGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYWLVGPSELM 503 GR QQ++AVR VLLS+LPPGAPA FR+LFPPT+W+ E NAA+TVPFF WLVGPSE++ Sbjct: 105 LGRTRAQQQQAVREVLLSMLPPGAPAQFRRLFPPTRWACEFNAALTVPFFRWLVGPSEVV 164
Query: 504 EVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 EVEV GV+Q+SGV I+KCRY+E SGCVGMCVNMCK+PTQDFFTN+FG Sbjct: 165 EVEVGGVRQRSGVRIEKCRYLESSGCVGMCVNMCKVPTQDFFTNEFG 211
>tr|B6SPJ8|B6SPJ8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 265
Score = 224 bits (572), Expect = 3e-57 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 10/167 (5%) Frame = +3
Query: 174 APMGQKTKYKDSFFDRAFMSLFARKMANVTGTSGKING----------YEDFVDVSREVM 323 APMG+KT+Y+D +RAFM LFARKM YE FVDVSR VM Sbjct: 45 APMGEKTEYRDGPLERAFMGLFARKMEKYAAKKPAAQAKEERAVWEWDYESFVDVSRRVM 104
Query: 324 KGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYWLVGPSELM 503 GR QQ++AVR VLLS+LPPGAPA FR+LFPPT+W+ E NAA+TVPFF WLVGPSE++ Sbjct: 105 LGRTRAQQQQAVREVLLSMLPPGAPAQFRRLFPPTRWACEFNAALTVPFFRWLVGPSEVV 164
Query: 504 EVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 EVEV GV+Q+SGV I+KCRY+E SGCVGMCVNMCK+PTQDFFTN+FG Sbjct: 165 EVEVGGVRQRSGVRIEKCRYLESSGCVGMCVNMCKVPTQDFFTNEFG 211
>tr|A9SKY4|A9SKY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131575 PE=4 SV=1 Length = 213
Score = 183 bits (464), Expect = 9e-45 Identities = 90/167 (53%), Positives = 117/167 (70%) Frame = +3
Query: 144 CGIAEPSGEPAPMGQKTKYKDSFFDRAFMSLFARKMANVTGTSGKINGYEDFVDVSREVM 323 C +AEPSG+PAPMG+KT YKDS+ D +S+ R++ NVTG S GY+ FV+++R+VM Sbjct: 4 CRMAEPSGKPAPMGKKTHYKDSWLDNTILSICMRRLGNVTGVSTTKKGYDGFVELTRKVM 63
Query: 324 KGRNPPQQKEAVRSVLLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYWLVGPSELM 503 + R+P Q+ + VL S +PP R+ P + +AE AA T+ + WLVGP E+ Sbjct: 64 ETRSPLLQRASSMRVLHSAIPPWLLKIIRRFLPNNQKTAETFAAATL-YAEWLVGPCEVK 122
Query: 504 EVEVNGVKQKSGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 EVEVNG QKSGV IKKCRY+E S CVGMCVN+CK+PTQDFFTN G Sbjct: 123 EVEVNGTMQKSGVLIKKCRYLESSNCVGMCVNLCKIPTQDFFTNSLG 169
>tr|B0BYN8|B0BYN8_ACAM1 Putative uncharacterized protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0881 PE=4 SV=1 Length = 214
Score = 171 bits (434), Expect = 3e-41 Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 5/157 (3%) Frame = +3
Query: 189 KTKYKDSFFDRAFMSLFARKMANVTGTSGKINGYEDFVDVSREVMKGRNPPQQKEAVRSV 368 KT YKD++FDRAF+ LF+ KMA V G ++ GYE VD+S ++M+GRN QQ+EA+ +V Sbjct: 2 KTVYKDNWFDRAFIWLFSEKMAQVAGQKSELAGYEGLVDLSVQIMRGRNAKQQQEALATV 61
Query: 369 LLSILPPGAPATFRKLFPPTKWSAEINAAITVPFFYWLVGPSELMEVEVNGVK-----QK 533 L S++P R LF PTK E NA F WLVGP +L EVEV G Q+ Sbjct: 62 LRSLIPSFVLLGIRTLFNPTKRILEWNAWFASRMFTWLVGPCDLTEVEVVGENGQLRTQR 121
Query: 534 SGVHIKKCRYIEYSGCVGMCVNMCKLPTQDFFTNDFG 644 SG+HI+KCRY+E SGCVGMCVNMCKLPTQDFF +FG Sbjct: 122 SGLHIQKCRYLEESGCVGMCVNMCKLPTQDFFAKEFG 158
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