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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961941
Clone id TST39A01NGRL0011_I11
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_I11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTCGCCATGGCCGTCGTGGCAT
CGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCTCCAGCGACTACCTCGCCCG
ACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGAGCAGCGGGCCCCTCTTCTT
CCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCCGATAAGCCCGTGAAGGTTG
ACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTATCTAGATGGCAGCCTTCCTG
GTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGGGGCCTGGAGGCTTCATTG
AACCTGATTGGTTGATGTATGGAGAAATCATCAATGGAAGATATGCAATGTTGGGTGCCG
TTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCATCCCTCAAGAAACCGCTG
TCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTACAACTACTGGGCAGATC
CCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGCTGAGCACCGAAGAGCAC
AGGATTATTATAAGCCTGGATCGATGGGAAAGCAGTATTTC
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 149
Score (bit) 259.0
E-value 1.0e-68
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_I11, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   259   1e-68
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   257   4e-68
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   106   9e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   104   4e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    89   3e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    87   6e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    82   3e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    68   5e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    65   3e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    63   1e-09
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    62   3e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    61   6e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    60   7e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   7e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   7e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    59   2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  259 bits (661), Expect = 1e-68
 Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 2/149 (1%)
 Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           VLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 185


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  257 bits (656), Expect = 4e-68
 Identities = 124/148 (83%), Positives = 130/148 (87%), Gaps = 3/148 (2%)
 Frame = +3

Query: 207 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           LEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  106 bits (265), Expect = 9e-23
 Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 126 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 305
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 306 FGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 620
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 31.6 bits (70), Expect = 3.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 273 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
           L+  D   PG   FDPLG     G G   +   L   EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  104 bits (259), Expect = 4e-22
 Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 126 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 305
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 306 FGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 620
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 31.6 bits (70), Expect = 3.7
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = +3

Query: 273 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
           L+  D   PG   FDPLG     G G   +   L   EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
 Frame = +3

Query: 129 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 308
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 309 GFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 485
           GFDPLGL  DPE         W +  E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPE------NLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 486 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 632
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+ +
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQ 168


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 87.4 bits (215), Expect = 6e-17
 Identities = 54/140 (38%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
 Frame = +3

Query: 216 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEII 392
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE         W +  E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELV 98

Query: 393 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 572
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 573 MGFAEHRRAQDYYKPGSMGK 632
             + E RR QD   PGS+ +
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQ 169


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +3

Query: 252 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
           W    QS +YLDGSL GD GFDPL L  DPE      +  W +  +++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGM 89

Query: 429 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 608
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 609 YKPGSMGK 632
             PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = +3

Query: 279 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKA 455
           +LDGSLPGDFGFDPLGL  DP     F++  W    E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 456 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 632
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 633 QY 638
           ++
Sbjct: 176 EW 177


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
 Frame = +3

Query: 201 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLM 377
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP     F++  W  
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 554
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQY 638
             ++ LMG+ E +R  D++ P S   ++
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDSQSVEW 172


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
 Frame = +3

Query: 261 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAP 437
           S+Q+ SYL G  PGD+G+D  GL  DPE    F     L   E+I+ R+AMLGA+G + P
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 438 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEH 590
           EIL K G+   E   VWF+ G  I   G  +Y  +P          ++ +++ LMGF E 
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEG 171

Query: 591 RR 596
            R
Sbjct: 172 YR 173
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 174
Score (bit) 271.0
E-value 2.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_I11, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   271   2e-71
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   264   4e-69
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   263   9e-69
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   262   1e-68
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   260   6e-68
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   259   1e-67
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   256   8e-67
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   254   2e-66
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   252   2e-65
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   252   2e-65
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   249   1e-64
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   248   3e-64
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   248   3e-64
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   245   2e-63
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   245   2e-63
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   245   2e-63
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   244   2e-63
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   244   3e-63
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   216   1e-54
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   213   8e-54
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   211   2e-53
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   211   2e-53
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   197   3e-49
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   197   3e-49
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   194   4e-48
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   193   9e-48
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   193   9e-48
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   191   3e-47
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   190   7e-47
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   188   2e-46

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  271 bits (694), Expect = 2e-71
 Identities = 135/174 (77%), Positives = 146/174 (83%), Gaps = 3/174 (1%)
 Frame = +3

Query: 129 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 299
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 300 GDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 479
           GD+GFDPLGLMDPEGPGGF+EP WL+YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 480 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYF
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYF 198


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  264 bits (674), Expect = 4e-69
 Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
 Frame = +3

Query: 201 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 371
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 372 LMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 551
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 552 FVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           FVLEMALMGFAEHRR QDY  PGSM KQYF
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSKQYF 200


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  263 bits (671), Expect = 9e-69
 Identities = 127/148 (85%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
 Frame = +3

Query: 201 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
            EMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYF 186


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  262 bits (670), Expect = 1e-68
 Identities = 127/148 (85%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
 Frame = +3

Query: 201 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
            EMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYF 186


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  260 bits (664), Expect = 6e-68
 Identities = 129/173 (74%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
 Frame = +3

Query: 132 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 302
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 303 DFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  259 bits (662), Expect = 1e-67
 Identities = 129/173 (74%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
 Frame = +3

Query: 132 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 302
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 303 DFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  256 bits (654), Expect = 8e-67
 Identities = 126/172 (73%), Positives = 136/172 (79%), Gaps = 2/172 (1%)
 Frame = +3

Query: 132 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 305
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 306 FGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 485
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 486 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGKQYF
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYF 185


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  254 bits (650), Expect = 2e-66
 Identities = 119/149 (79%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
 Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           V  MALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGKQYF 179


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  252 bits (643), Expect = 2e-65
 Identities = 121/149 (81%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
 Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           VLEMALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYF 185


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  252 bits (643), Expect = 2e-65
 Identities = 121/149 (81%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
 Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
           VLEMALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYF 185