DK961941
Clone id TST39A01NGRL0011_I11
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_I11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGGAGGTCGCCATGGCCGTCGTGGCAT
CGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTACCGCTCCAGCGACTACCTCGCCCG
ACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTCTCCGAGCAGCGGGCCCCTCTTCTT
CCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAACCGCCGATAAGCCCGTGAAGGTTG
ACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAAGCTATCTAGATGGCAGCCTTCCTG
GTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACCCAGAGGGGCCTGGAGGCTTCATTG
AACCTGATTGGTTGATGTATGGAGAAATCATCAATGGAAGATATGCAATGTTGGGTGCCG
TTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTGGTCTCATCCCTCAAGAAACCGCTG
TCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAGGAACCTACAACTACTGGGCAGATC
CCTACACGCTATTCGTCCTTGAGATGGCCCTCATGGGCTTTGCTGAGCACCGAAGAGCAC
AGGATTATTATAAGCCTGGATCGATGGGAAAGCAGTATTTC
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 149
Score (bit) 259.0
E-value 1.0e-68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_I11, 5'
(641 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl... 259 1e-68
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas... 257 4e-68
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 106 9e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 104 4e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 89 3e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 87 6e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 82 3e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro... 68 5e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 65 3e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 65 4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 65 4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 64 5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 64 7e-10
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 63 1e-09
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 62 2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 62 2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 62 3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 62 3e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 61 6e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 60 7e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 60 7e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 60 7e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 60 1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty... 60 1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 60 1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 59 2e-08
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c... 59 2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 59 2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 59 2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 59 2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Length = 273

Score = 259 bits (661), Expect = 1e-68
Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 2/149 (1%)
Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
F VRA + PVK +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97 AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
VLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 185


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
OS=Pisum sativum GN=lhca3 PE=1 SV=1
Length = 275

Score = 257 bits (656), Expect = 4e-68
Identities = 124/148 (83%), Positives = 130/148 (87%), Gaps = 3/148 (2%)
Frame = +3

Query: 207 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
VRA A PVK VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 40 VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
LEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270

Score = 106 bits (265), Expect = 9e-23
Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Frame = +3

Query: 126 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 305
++ FLGGR LR + TV AD DR LWF +LDGSLPGD
Sbjct: 30 TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 306 FGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
FGFDPLGL DPE W E+++ R+AMLGA G PE+L K G++ +
Sbjct: 86 FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 620
W+ G Y+ D TLF++E+ L+G+AE RR D KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



Score = 31.6 bits (70), Expect = 3.7
Identities = 22/52 (42%), Positives = 25/52 (48%)
Frame = +3

Query: 273 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
L+ D PG FDPLG G G + L EI NGR AML +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270

Score = 104 bits (259), Expect = 4e-22
Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +3

Query: 126 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 305
++ FLGG+ LR + V A A P DR LWF +LDGSLPGD
Sbjct: 30 TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 306 FGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
FGFDPLGL DPE W E+++ R+AMLGA G PE L K G++ +
Sbjct: 86 FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 620
W+ G Y+ D TLFV+E+ L+G+AE RR D KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



Score = 31.6 bits (70), Expect = 3.7
Identities = 22/52 (42%), Positives = 25/52 (48%)
Frame = +3

Query: 273 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
L+ D PG FDPLG G G + L EI NGR AML +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252

Score = 88.6 bits (218), Expect = 3e-17
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Frame = +3

Query: 129 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 308
+ +FLGG ++G +A V+ + W S YL GSLPGD
Sbjct: 19 KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 309 GFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 485
GFDPLGL DPE W + E++NGR+AMLG G + PE+ G+I
Sbjct: 75 GFDPLGLAEDPE------NLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 486 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 632
W+ G Y+A TLFV+E L + E RR QD PGS+ +
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQ 168


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251

Score = 87.4 bits (215), Expect = 6e-17
Identities = 54/140 (38%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +3

Query: 216 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEII 392
T+ V+ + W S YL GSL GD GFDPLGL DPE W + E++
Sbjct: 45 TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELV 98

Query: 393 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 572
NGR+AMLG G + PE+ K G+I W+ G Y+A TLFV+E L
Sbjct: 99 NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 573 MGFAEHRRAQDYYKPGSMGK 632
+ E RR QD PGS+ +
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQ 169


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231

Score = 81.6 bits (200), Expect = 3e-15
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3

Query: 252 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGA 428
W QS +YLDGSL GD GFDPL L DPE + W + +++NGR+AMLG G
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGM 89

Query: 429 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 608
+ PE+L KAGL+ A W R +P G Y+A T + M+ + E RR QD
Sbjct: 90 LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 609 YKPGSMGK 632
PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
chloroplastic OS=Spinacia oleracea PE=2 SV=1
Length = 261

Score = 67.8 bits (164), Expect = 5e-11
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Frame = +3

Query: 279 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKA 455
+LDGSLPGDFGFDPLGL DP F++ W E+I+GR+AML +G +G+A
Sbjct: 75 WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 456 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 632
T + WF G P + +++ TL ++ LMG+ E +R D++ P S
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 633 QY 638
++
Sbjct: 176 EW 177


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
SV=1
Length = 256

Score = 65.1 bits (157), Expect = 3e-10
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Frame = +3

Query: 201 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLM 377
FTV A A K + + +LDGSLPGD+GFDPLGL DP F++ W
Sbjct: 44 FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 554
E+I+GR+AM +G +G+A + + WF G P + +++ TL
Sbjct: 98 EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQY 638
++ LMG+ E +R D++ P S ++
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDSQSVEW 172


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 64.7 bits (156), Expect = 4e-10
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Frame = +3

Query: 261 SKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAP 437
S+Q+ SYL G PGD+G+D GL DPE F L E+I+ R+AMLGA+G + P
Sbjct: 60 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFP 113

Query: 438 EILGKAGLIPQETAVVWFRTGV-IPPLGTYNYWADP--------YTLFVLEMALMGFAEH 590
EIL K G+ E VWF+ G I G +Y +P ++ +++ LMGF E
Sbjct: 114 EILSKNGVKFGE--AVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEG 171

Query: 591 RR 596
R
Sbjct: 172 YR 173


tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 174
Score (bit) 271.0
E-value 2.0e-71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961941|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_I11, 5'
(641 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein... 271 2e-71
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea... 264 4e-69
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul... 263 9e-69
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul... 262 1e-68
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ... 260 6e-68
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ... 259 1e-67
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome... 256 8e-67
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ... 254 2e-66
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot... 252 2e-65
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot... 252 2e-65
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot... 249 1e-64
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs... 248 3e-64
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza... 248 3e-64
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit... 245 2e-63
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten... 245 2e-63
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit... 245 2e-63
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot... 244 2e-63
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit... 244 3e-63
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar... 216 1e-54
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ... 213 8e-54
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-... 211 2e-53
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-... 211 2e-53
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr... 197 3e-49
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ... 197 3e-49
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c... 194 4e-48
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ... 193 9e-48
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ... 193 9e-48
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr... 191 3e-47
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ... 190 7e-47
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr... 188 2e-46

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
Length = 286

Score = 271 bits (694), Expect = 2e-71
Identities = 135/174 (77%), Positives = 146/174 (83%), Gaps = 3/174 (1%)
Frame = +3

Query: 129 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 299
+Q LGG+AL FTVR A+++KPVK DRQLWFAS QSLSYLDGSLP
Sbjct: 25 QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 300 GDFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 479
GD+GFDPLGLMDPEGPGGF+EP WL+YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85 GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 480 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
+ WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY PGSMGKQYF
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYF 198


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 289

Score = 264 bits (674), Expect = 4e-69
Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Frame = +3

Query: 201 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 371
F VR A++ KPVK DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51 FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 372 LMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 551
L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 552 FVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
FVLEMALMGFAEHRR QDY PGSM KQYF
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSKQYF 200


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 274

Score = 263 bits (671), Expect = 9e-69
Identities = 127/148 (85%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Frame = +3

Query: 201 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
F VRA + PVK +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 39 FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
EMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYF 186


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 274

Score = 262 bits (670), Expect = 1e-68
Identities = 127/148 (85%), Positives = 132/148 (89%), Gaps = 1/148 (0%)
Frame = +3

Query: 201 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLM 377
F VRA + PVK +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 39 FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 378 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 557
YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 558 LEMALMGFAEHRRAQDYYKPGSMGKQYF 641
EMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYF 186


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
OS=Lycoris aurea PE=2 SV=1
Length = 275

Score = 260 bits (664), Expect = 6e-68
Identities = 129/173 (74%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
Frame = +3

Query: 132 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 302
+Q LGGR ++ F V+A + PVK DRQLWFASKQSLSYLDGSLPG
Sbjct: 15 RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 303 DFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG GAIAPEILGK GLIP ETA+
Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
OS=Lycoris aurea PE=2 SV=1
Length = 275

Score = 259 bits (662), Expect = 1e-67
Identities = 129/173 (74%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
Frame = +3

Query: 132 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 302
+Q LGGR ++ F V+A + PVK DRQLWFASKQSLSYLDGSLPG
Sbjct: 15 RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 303 DFGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 482
DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG GAIAPEILGK GLIP ETA+
Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 483 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYF
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 187


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
PE=4 SV=1
Length = 274

Score = 256 bits (654), Expect = 8e-67
Identities = 126/172 (73%), Positives = 136/172 (79%), Gaps = 2/172 (1%)
Frame = +3

Query: 132 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 305
+Q LG R L++ F VRA + PVK DR LWFASKQSL+YLDGSLPGD
Sbjct: 19 RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 306 FGFDPLGLMDPEGPGGFIEPDWLMYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 485
+GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+
Sbjct: 74 YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 486 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+ PGSMGKQYF
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYF 185


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
mays PE=2 SV=1
Length = 267

Score = 254 bits (650), Expect = 2e-66
Identities = 119/149 (79%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
F VRA++ P K DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31 FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91 AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
V MALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGKQYF 179


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
Length = 273

Score = 252 bits (643), Expect = 2e-65
Identities = 121/149 (81%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
F V+A A PVK +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97 AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
VLEMALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYF 185


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
Length = 273

Score = 252 bits (643), Expect = 2e-65
Identities = 121/149 (81%), Positives = 128/149 (85%), Gaps = 2/149 (1%)
Frame = +3

Query: 201 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 374
F V+A A PVK +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 375 MYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 554
YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97 AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 555 VLEMALMGFAEHRRAQDYYKPGSMGKQYF 641
VLEMALMGFAEHRR QD+Y PGSMGKQYF
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYF 185