DK961944 |
Clone id |
TST39A01NGRL0011_I14 |
Library |
TST39 |
Length |
639 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_I14. 5' end sequence. |
Accession |
DK961944 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL101Contig1 |
Sequence |
AGCTCCCATCGTCGTTATGGCATTTGCAAAGGCGAAGAAGACAAAGGCCTATTTCAAGCG CTATCAAGTGAAGTACAAGAGAAGACGGGCTGGCAAGACTGATTACCGAGCAAGGGTCAG GCTTACCAACCAGGACAAAAATAAGTACAACACCCCAAAGTATCGCCTTGTTGTGCGATT TACCAACAAGGACATCACTGCCCAGATAACGTATGCCACTCTAGCTGGTGATGTTGTTCT TGCAGCGGCCTACTCTCATGAGCTACCTCAATATGGGCTTAAAACAGGGCTGACAAATTA TGCGGCAGCATACTGCACTGGATTGCTACTTGCTCGGAGAGTTTTGAAGCAGTTTGATCT AGACCAGGAATATGTTGGCAATGAGGAGGCTACAGGGGAGGACTATAACGTTGAGGAGGC TGGTGAACGCCGACCTTTCAGGGCCCTCCTTGATGTTGGCCTTGTGAGAACCACCACGGG GAACCGGGTTTTTGGAGCCTTGAAGGGTGCTTTAGATGGGGGTCTGGATGTTCCACATAG TGACAAGAGGTTTGCAGGGTATAGTAAAGAAGAGAAGTCATTGAATGCAGATGCTCATAG GAGATATATTTTTGGAGGTCATGTGGCTGATTACATGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0JGY1 |
Definition |
sp|Q0JGY1|RL51_ORYSJ 60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica |
Align length |
193 |
Score (bit) |
310.0 |
E-value |
3.0e-84 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SNA3 |
Definition |
tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
193 |
Score (bit) |
322.0 |
E-value |
9.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961944|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_I14, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella paten... 322 9e-87 tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella paten... 319 8e-86 tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella paten... 318 1e-85 tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella paten... 318 2e-85 tr|B8A7P9|B8A7P9_ORYSI Putative uncharacterized protein OS=Oryza... 310 4e-83 tr|B7EWY9|B7EWY9_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 310 4e-83 tr|B8A7P8|B8A7P8_ORYSI Putative uncharacterized protein OS=Oryza... 308 1e-82 tr|B7SDE4|B7SDE4_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa ... 308 1e-82 tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea... 307 4e-82 tr|B6TYP7|B6TYP7_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 301 2e-80 tr|B6THG9|B6THG9_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE... 301 3e-80 tr|A3A0I1|A3A0I1_ORYSJ Putative uncharacterized protein OS=Oryza... 299 8e-80 tr|B7FJX5|B7FJX5_MEDTR Putative uncharacterized protein OS=Medic... 299 1e-79 tr|A7R4R2|A7R4R2_VITVI Chromosome undetermined scaffold_763, who... 299 1e-79 tr|A9PB43|A9PB43_POPTR Putative uncharacterized protein OS=Popul... 298 1e-79 tr|Q0JGY2|Q0JGY2_ORYSJ Os01g0896700 protein (Putative uncharacte... 297 3e-79 tr|A7QAV5|A7QAV5_VITVI Chromosome chr5 scaffold_72, whole genome... 297 4e-79 tr|A9PFA8|A9PFA8_POPTR Putative uncharacterized protein OS=Popul... 296 9e-79 tr|A9PH69|A9PH69_POPTR Putative uncharacterized protein OS=Popul... 289 1e-76 tr|A9PBZ9|A9PBZ9_POPTR Putative uncharacterized protein OS=Popul... 289 1e-76 tr|Q38HU5|Q38HU5_SOLTU Putative uncharacterized protein OS=Solan... 279 9e-74 tr|A8WNL0|A8WNL0_CAEBR CBR-RPL-5 protein OS=Caenorhabditis brigg... 263 9e-69 tr|Q86LY6|Q86LY6_BRALA Ribosomal protein L5 (Fragment) OS=Branch... 253 7e-66 tr|B6LCB3|B6LCB3_BRAFL Putative uncharacterized protein OS=Branc... 252 2e-65 tr|B5DK39|B5DK39_DROPS GA28757 OS=Drosophila pseudoobscura pseud... 251 3e-65 tr|B4GXB8|B4GXB8_DROPE GL21177 OS=Drosophila persimilis GN=GL211... 251 3e-65 tr|A8PSW9|A8PSW9_BRUMA 60S ribosomal protein L5, putative OS=Bru... 251 3e-65 tr|Q7PL67|Q7PL67_DROME Ribosomal protein L5, isoform C (Fragment... 249 8e-65 tr|Q6XIM1|Q6XIM1_DROYA Similar to Drosophila melanogaster yip6 (... 249 8e-65 tr|B4IT18|B4IT18_DROYA Yip6 OS=Drosophila yakuba GN=Dyak\yip6 PE... 249 8e-65
>tr|A9SNA3|A9SNA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_214065 PE=4 SV=1 Length = 293
Score = 322 bits (826), Expect = 9e-87 Identities = 156/193 (80%), Positives = 170/193 (88%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVKYKRRRAGKTDYRAR+RLT QDKNKYNTPKYRLVVRFTNKDI AQITYATLAGD+V Sbjct: 15 RFQVKYKRRRAGKTDYRARIRLTTQDKNKYNTPKYRLVVRFTNKDIVAQITYATLAGDIV 74
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 L +AY+HELP+YGLK GLTNYAAAYCTGLLLARR LK F+LDQEYVGNE+ATGEDYNVEE Sbjct: 75 LTSAYAHELPRYGLKGGLTNYAAAYCTGLLLARRHLKNFELDQEYVGNEQATGEDYNVEE 134
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 +RPFRALLDVGLVRTTTGNRVF VPHS+KRFAGYSKE+KSLNA+ H Sbjct: 135 GEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSEKRFAGYSKEDKSLNAETH 194
Query: 599 RRYIFGGHVADYM 637 R+YI GGH+ADYM Sbjct: 195 RKYILGGHIADYM 207
>tr|A9S013|A9S013_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207358 PE=4 SV=1 Length = 293
Score = 319 bits (818), Expect = 8e-86 Identities = 156/193 (80%), Positives = 168/193 (87%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVKYKRRRAGKTDYRAR+RLT QDKNKYNTPKYR VVRFTNKDI AQITYATLAGD+V Sbjct: 15 RFQVKYKRRRAGKTDYRARIRLTTQDKNKYNTPKYRYVVRFTNKDIVAQITYATLAGDIV 74
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 L +AY+HELP+YGLK GLTNYAAAYCTGLLLARR LK F+LDQEYVGNE ATGEDYNVEE Sbjct: 75 LTSAYAHELPRYGLKGGLTNYAAAYCTGLLLARRHLKNFELDQEYVGNETATGEDYNVEE 134
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 +RPFRALLDVGLVRTTTGNRVF VPHS+KRFAGYSKE+KSLNA+ H Sbjct: 135 GEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSEKRFAGYSKEDKSLNAEIH 194
Query: 599 RRYIFGGHVADYM 637 R+YI GGHVADYM Sbjct: 195 RKYILGGHVADYM 207
>tr|A9TYC5|A9TYC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226607 PE=4 SV=1 Length = 293
Score = 318 bits (816), Expect = 1e-85 Identities = 155/193 (80%), Positives = 168/193 (87%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVKYKRRRAGKTDYRAR+RLT QDKNKYNTPKYR VVRFTNKDI AQITYATLAGD+V Sbjct: 15 RFQVKYKRRRAGKTDYRARIRLTTQDKNKYNTPKYRFVVRFTNKDIVAQITYATLAGDIV 74
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 L +AY+HELP+YGLK GLTNYAAAYCTGLLLARR LK F+LDQEYVGNE ATGEDYNVEE Sbjct: 75 LTSAYAHELPRYGLKGGLTNYAAAYCTGLLLARRHLKNFELDQEYVGNETATGEDYNVEE 134
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 +RPFRALLDVGLVRTTTGNRVF VPHS+KRFAG+SKE+KSLNA+ H Sbjct: 135 GEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSEKRFAGFSKEDKSLNAETH 194
Query: 599 RRYIFGGHVADYM 637 R+YI GGHVADYM Sbjct: 195 RKYILGGHVADYM 207
>tr|A9TXS7|A9TXS7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199314 PE=4 SV=1 Length = 293
Score = 318 bits (815), Expect = 2e-85 Identities = 154/193 (79%), Positives = 168/193 (87%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVKYKRRRAGKTDYRAR+RLT QDKNKYNTPKYR VVRFTNKDI AQITYATLAGD+V Sbjct: 15 RFQVKYKRRRAGKTDYRARIRLTTQDKNKYNTPKYRFVVRFTNKDIVAQITYATLAGDIV 74
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 L +AY+HELP+YGLK GLTNYAAAYCTGLLLARR LK +DLD EYVGNE+ATGEDYNVEE Sbjct: 75 LTSAYAHELPRYGLKGGLTNYAAAYCTGLLLARRHLKNYDLDDEYVGNEQATGEDYNVEE 134
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 +RPFRALLDVGLVRTTTGNRVF VPHS+KRFAGY+KE+KSLNA+ H Sbjct: 135 GEGKRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSEKRFAGYNKEDKSLNAEIH 194
Query: 599 RRYIFGGHVADYM 637 R+YI GGHVADYM Sbjct: 195 RKYILGGHVADYM 207
>tr|B8A7P9|B8A7P9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04779 PE=4 SV=1 Length = 304
Score = 310 bits (795), Expect = 4e-83 Identities = 150/193 (77%), Positives = 166/193 (86%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRR GKTDYRAR+RLTNQDKNKYNTPKYR VVRFTNKDITAQI YAT+AGD+V Sbjct: 16 RFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIV 75
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 +AAAYSHELP+YGL+ GLTNYAAAYCTGLLLARRVLK LDQEY GN EATGEDY VE Sbjct: 76 MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEP 135
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 A ERRPFRALLDVGL+RTTTGNRVF +PHSDKRFAG+ K+EK L++D H Sbjct: 136 ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIH 195
Query: 599 RRYIFGGHVADYM 637 R+YI+GGHVADYM Sbjct: 196 RKYIYGGHVADYM 208
>tr|B7EWY9|B7EWY9_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 304
Score = 310 bits (795), Expect = 4e-83 Identities = 150/193 (77%), Positives = 166/193 (86%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRR GKTDYRAR+RLTNQDKNKYNTPKYR VVRFTNKDITAQI YAT+AGD+V Sbjct: 16 RFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIV 75
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 +AAAYSHELP+YGL+ GLTNYAAAYCTGLLLARRVLK LDQEY GN EATGEDY VE Sbjct: 76 MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEP 135
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 A ERRPFRALLDVGL+RTTTGNRVF +PHSDKRFAG+ K+EK L++D H Sbjct: 136 ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIH 195
Query: 599 RRYIFGGHVADYM 637 R+YI+GGHVADYM Sbjct: 196 RKYIYGGHVADYM 208
>tr|B8A7P8|B8A7P8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04778 PE=4 SV=1 Length = 304
Score = 308 bits (790), Expect = 1e-82 Identities = 149/193 (77%), Positives = 165/193 (85%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRR GKTDYRAR+RLTNQDKNKYNTPKYR VVRFTNKDITAQI YAT+AGD+V Sbjct: 16 RFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIV 75
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 +AAAYSHELP+YGL+ GLTNYAAAYCTGLLLARRVL LDQEY GN EATGEDY VE Sbjct: 76 MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEP 135
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 A ERRPFRALLDVGL+RTTTGNRVF +PHSDKRFAG+ K+EK L++D H Sbjct: 136 ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIH 195
Query: 599 RRYIFGGHVADYM 637 R+YI+GGHVADYM Sbjct: 196 RKYIYGGHVADYM 208
>tr|B7SDE4|B7SDE4_ORYSJ 60S ribosomal protein L5 OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 304
Score = 308 bits (790), Expect = 1e-82 Identities = 149/193 (77%), Positives = 165/193 (85%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRR GKTDYRAR+RLTNQDKNKYNTPKYR VVRFTNKDITAQI YAT+AGD+V Sbjct: 16 RFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIV 75
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 +AAAYSHELP+YGL+ GLTNYAAAYCTGLLLARRVL LDQEY GN EATGEDY VE Sbjct: 76 MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEP 135
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 A ERRPFRALLDVGL+RTTTGNRVF +PHSDKRFAG+ K+EK L++D H Sbjct: 136 ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIH 195
Query: 599 RRYIFGGHVADYM 637 R+YI+GGHVADYM Sbjct: 196 RKYIYGGHVADYM 208
>tr|A9NKC3|A9NKC3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 307 bits (786), Expect = 4e-82 Identities = 149/193 (77%), Positives = 166/193 (86%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRR GKTDYRAR+RL NQDKNKYNTPKYRLVVRF+NKD+ AQI YATLAGDVV Sbjct: 15 RFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRLVVRFSNKDVVAQIIYATLAGDVV 74
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 +AAAYS ELP+YGL+ GLTNYAAAYCTGLLLARRVLKQ ++D+EYVGNEEA+GEDY+VE Sbjct: 75 MAAAYSRELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDEEYVGNEEASGEDYSVEP 134
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 RRPFRALLDVGLVRTTTGNRVF +PHSDKRFAGY+KE KSL+AD H Sbjct: 135 NDARRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYNKESKSLDADLH 194
Query: 599 RRYIFGGHVADYM 637 R+YI GGHVA YM Sbjct: 195 RKYILGGHVAAYM 207
>tr|B6TYP7|B6TYP7_MAIZE 60S ribosomal protein L5-1 OS=Zea mays PE=2 SV=1 Length = 302
Score = 301 bits (772), Expect = 2e-80 Identities = 146/193 (75%), Positives = 166/193 (86%) Frame = +2
Query: 59 RYQVKYKRRRAGKTDYRARVRLTNQDKNKYNTPKYRLVVRFTNKDITAQITYATLAGDVV 238 R+QVK+KRRRAGKTDYRAR+RL NQDKNKYNTPKYR VVRFTNKDITAQI A++AGD+V Sbjct: 16 RFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDMV 75
Query: 239 LAAAYSHELPQYGLKTGLTNYAAAYCTGLLLARRVLKQFDLDQEYVGNEEATGEDYNVEE 418 LA+AYSHELP+YGL+ GLTNYAAAYCTGLLLARRVLK LD+EY GN EATGED++VE Sbjct: 76 LASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKIRGLDKEYEGNVEATGEDFSVEP 135
Query: 419 AGERRPFRALLDVGLVRTTTGNRVFXXXXXXXXXXXXVPHSDKRFAGYSKEEKSLNADAH 598 A ERRPFRALLDVGL+RTTTGNRVF +PHS+KRFAG+ K++K L+AD H Sbjct: 136 ADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFAGFKKDDKQLDADTH 195
Query: 599 RRYIFGGHVADYM 637 RRYI+GGHVADYM Sbjct: 196 RRYIYGGHVADYM 208
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