DK961955 |
Clone id |
TST39A01NGRL0011_J01 |
Library |
TST39 |
Length |
504 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_J01. 5' end sequence. |
Accession |
DK961955 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL740Contig1 |
Sequence |
ATGGCTTTGTGGTGCTGCTGGGAGGCCTTGTGGGTTTCCTCCGGAAGGGCAGCTCCACTT CTCTGATGGGCGGTGGTGCTGCCGGCTCGCTTCTGCTTCTCGCAGGCTATCTCAGCTTGC AGGCCTTTAAGAAACATGAGAACTCCTACTTCGCATTTCTACTGGAGACAGCTATTTCAG TAGGTCTGACTTGGGTAATGGGACAGCGGTATCAAGCCAGTGGAAAGATAATGCCAGCTG GAATGGTGGCGGTTATCAGTGGGGTCATGGCGTTGTTCTATTTGTACAAGCTATCTATGG GTGGAAACCACATTGTCAAGAGACACGAATGACAATTAGGCAAAGCTCAGCTCAGAACTC CTGTTATTGTAGATTTAATGAGAAACAACAATAAAACCTGCTATTATCACATGATCATGT CTCAAATAACAGTGTCAAAAGTGGAGATGGCATCTAAATCAACGAGCAATGGTTTTGGAC TCAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O64847 |
Definition |
sp|O64847|U136_ARATH UPF0136 membrane protein At2g26240 OS=Arabidopsis thaliana |
Align length |
39 |
Score (bit) |
38.9 |
E-value |
0.011 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRF8 |
Definition |
tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
105 |
Score (bit) |
100.0 |
E-value |
5.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961955|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_J01, 5' (469 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea... 100 5e-20 tr|A7P0S6|A7P0S6_VITVI Chromosome chr19 scaffold_4, whole genome... 94 3e-18 tr|A9TER4|A9TER4_PHYPA Predicted protein OS=Physcomitrella paten... 93 8e-18 tr|A9PIM6|A9PIM6_POPJC Putative uncharacterized protein OS=Popul... 87 5e-16 tr|B7FH11|B7FH11_MEDTR Putative uncharacterized protein OS=Medic... 86 9e-16 tr|B6T8F3|B6T8F3_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15 tr|Q9AYA9|Q9AYA9_ORYSA Putative uncharacterized protein OSJNBa00... 84 5e-15 tr|Q10I13|Q10I13_ORYSJ Os03g0568500 protein OS=Oryza sativa subs... 84 5e-15 tr|B8AKU3|B8AKU3_ORYSI Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|Q9C6T7|Q9C6T7_ARATH Putative uncharacterized protein F4M15.3 ... 81 3e-14 tr|Q9LJU6|Q9LJU6_ARATH Emb|CAB68134.1 (Putative uncharacterized ... 80 5e-14 tr|A3AJN9|A3AJN9_ORYSJ Putative uncharacterized protein OS=Oryza... 71 2e-11 tr|Q6F2W8|Q6F2W8_ORYSJ Os03g0584300 protein OS=Oryza sativa subs... 66 1e-09 tr|B8AL72|B8AL72_ORYSI Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|A6MZR1|A6MZR1_ORYSI Putative uncharacterized protein (Fragmen... 64 3e-09 tr|B8B6N6|B8B6N6_ORYSI Putative uncharacterized protein OS=Oryza... 64 4e-09 tr|B6U3V5|B6U3V5_MAIZE Putative uncharacterized protein OS=Zea m... 58 3e-07 tr|A3AJY4|A3AJY4_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A9SYF6|A9SYF6_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007 tr|A7PWL2|A7PWL2_VITVI Chromosome chr8 scaffold_34, whole genome... 43 0.009 tr|B4FD53|B4FD53_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.012 tr|Q7XQN3|Q7XQN3_ORYSJ Os04g0470300 protein OS=Oryza sativa subs... 42 0.020 tr|Q01JN1|Q01JN1_ORYSA OSIGBa0124N08.6 protein OS=Oryza sativa G... 42 0.020 tr|B1N671|B1N671_SOLLC Putative uncharacterized protein OS=Solan... 42 0.020 tr|Q7XPM7|Q7XPM7_ORYSJ Os04g0653100 protein OS=Oryza sativa subs... 41 0.026 tr|A9RP37|A9RP37_PHYPA Predicted protein (Fragment) OS=Physcomit... 41 0.026 tr|A3AY48|A3AY48_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.026 tr|A2XYD6|A2XYD6_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026 tr|A8QC23|A8QC23_BRUMA Transmembrane protein 14C, putative OS=Br... 41 0.034 tr|A8QC25|A8QC25_BRUMA Transmembrane protein 14C, putative OS=Br... 40 0.058
>tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 119
Score = 100 bits (248), Expect = 5e-20 Identities = 50/105 (47%), Positives = 63/105 (60%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 ++GG+VG+LRK +AF+K NSYFA L+T S LTW Sbjct: 15 IIGGVVGYLRKGSTVSLAGGLGTGLMLLLAGQLSLKAFEKRRNSYFAIFLQTVCSSALTW 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQRY + KIMPAG+V VIS +M LFYLYK++ GGNHI + E Sbjct: 75 VMGQRYLTTSKIMPAGIVTVISAMMTLFYLYKIAKGGNHIGPKKE 119
>tr|A7P0S6|A7P0S6_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027345001 PE=4 SV=1 Length = 119
Score = 94.0 bits (232), Expect = 3e-18 Identities = 47/103 (45%), Positives = 60/103 (58%) Frame = +2
Query: 8 GGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTWVM 187 GG+VG+ +K +AFKK +NSY A +LET + LTWVM Sbjct: 17 GGIVGYAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYLALILETVCAAALTWVM 76
Query: 188 GQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 GQRY + KIMPAG+VA IS +M FYLYK++ GGNHI + E Sbjct: 77 GQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119
>tr|A9TER4|A9TER4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169659 PE=4 SV=1 Length = 119
Score = 92.8 bits (229), Expect = 8e-18 Identities = 46/103 (44%), Positives = 59/103 (57%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 L GGL GFLRK Q + + S A LET ++V LTW Sbjct: 15 LFGGLFGFLRKGSTTSLMGGVGSGALLLLAAYKSHQDYLRGSKSSLALFLETVVAVALTW 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKR 310 VMGQR+ + K MPAGMVA +SG+M+LFYLYK++ GGN I+K+ Sbjct: 75 VMGQRFMVTSKFMPAGMVAALSGIMSLFYLYKVATGGNRIIKK 117
>tr|A9PIM6|A9PIM6_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 119
Score = 86.7 bits (213), Expect = 5e-16 Identities = 43/105 (40%), Positives = 62/105 (59%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 ++GG++G+L+K +AF+K +NS+ +ET + LT+ Sbjct: 15 VIGGVIGYLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFLGLAIETVCAAILTF 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQRY + KIMPAG+VA IS +M LFYLYK++ GGNHI + E Sbjct: 75 VMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAAGGNHIPAKAE 119
>tr|B7FH11|B7FH11_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 121
Score = 85.9 bits (211), Expect = 9e-16 Identities = 44/98 (44%), Positives = 54/98 (55%) Frame = +2
Query: 8 GGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTWVM 187 GGL GF+ K AF K +NSY A +E + LTW+M Sbjct: 17 GGLFGFIHKGSTASLAGGVGTGLLLILAGYLSLNAFGKRKNSYLALAIEILCAGVLTWIM 76
Query: 188 GQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHI 301 GQRY + KIMPAGM+A +S +M LFYLYKL+ GGNHI Sbjct: 77 GQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHI 114
>tr|B6T8F3|B6T8F3_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 120
Score = 84.3 bits (207), Expect = 3e-15 Identities = 43/100 (43%), Positives = 59/100 (59%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 L GG++G+LR+ +AF+K NSY A LET ++ LT+ Sbjct: 15 LAGGVLGYLRRGSTASLAGGAGAGALLLLAGFVSLKAFQKRRNSYVALALETLCALALTY 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHI 301 VMGQR+ + KIMPAG VA +S VM+ FYL+K++ GGNHI Sbjct: 75 VMGQRFLETSKIMPAGAVAGLSAVMSAFYLFKIATGGNHI 114
>tr|Q9AYA9|Q9AYA9_ORYSA Putative uncharacterized protein OSJNBa0004B24.3 OS=Oryza sativa GN=OSJNBa0004B24.3 PE=4 SV=1 Length = 119
Score = 83.6 bits (205), Expect = 5e-15 Identities = 42/105 (40%), Positives = 60/105 (57%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 L GG++G+ R+ + F+K NSY A LET ++ LT+ Sbjct: 15 LAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYLALALETLCALALTY 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQRY + KIMPAG+VA +S +M+ FYL+K++ GGNHI + E Sbjct: 75 VMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIATGGNHIPPKKE 119
>tr|Q10I13|Q10I13_ORYSJ Os03g0568500 protein OS=Oryza sativa subsp. japonica GN=Os03g0568500 PE=4 SV=1 Length = 119
Score = 83.6 bits (205), Expect = 5e-15 Identities = 42/105 (40%), Positives = 60/105 (57%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 L GG++G+ R+ + F+K NSY A LET ++ LT+ Sbjct: 15 LAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYLALALETLCALALTY 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQRY + KIMPAG+VA +S +M+ FYL+K++ GGNHI + E Sbjct: 75 VMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIATGGNHIPPKKE 119
>tr|B8AKU3|B8AKU3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12299 PE=4 SV=1 Length = 119
Score = 83.6 bits (205), Expect = 5e-15 Identities = 42/105 (40%), Positives = 60/105 (57%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 L GG++G+ R+ + F+K NSY A LET ++ LT+ Sbjct: 15 LAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYLALALETLCALALTY 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQRY + KIMPAG+VA +S +M+ FYL+K++ GGNHI + E Sbjct: 75 VMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIATGGNHIPPKKE 119
>tr|Q9C6T7|Q9C6T7_ARATH Putative uncharacterized protein F4M15.3 (Putative uncharacterized protein At1g50740) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g50740 PE=2 SV=1 Length = 119
Score = 80.9 bits (198), Expect = 3e-14 Identities = 42/105 (40%), Positives = 60/105 (57%) Frame = +2
Query: 2 LLGGLVGFLRKXXXXXXXXXXXXXXXXXXXXXXXXQAFKKHENSYFAFLLETAISVGLTW 181 ++GG +G+L+K +AF+K + S A LLET I+ LT+ Sbjct: 15 IVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAAALTF 74
Query: 182 VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMGGNHIVKRHE 316 VMGQR+ + KIMPA +VA IS +M FY+YK++ GGNHI + E Sbjct: 75 VMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPKAE 119
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