DK961959
Clone id TST39A01NGRL0011_J05
Library
Length 693
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_J05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGCCTCTACAGTTTTGCTACGAAAGACTCAATGCGTGAGCGTTCGGTTTGAGCGTTGCGA
GAGCGATAACAAGTTGACGAGCACTAGCAGCAGCACTGAGATGTCTTCATCCATGGCGGC
TGTATCGCCGCAATCGCTTTCTAGCTGCAGAGAGAGTGCGCTCTCAGGGCCATTGTCTTT
ACCTCGTACATGCCGGATTTCACGCTTTAACCCCAGTTCTCTACGGAGAGGAAGCTGCAG
AGTGCAAGCGATAGCTCCCTCACCCGTCAGTGTTACTGCCCCAAGCATGTCCAAGTTGAA
TGACTTCGATCCCTCCTCCATGCTTCTCAGGCAGCGCATCATCTTTCTGGGCTCCCAGGT
AGATGATTTTTCTGCAGATGTGATTATCAGCCAGTTGCTGCTTCTTGATGCAGAGGACTC
AACAAAGGATATAAAGCTTTTTATAAATTCCCCCGGAGGTTCTGTCACGGCTGGTATGGG
GATCTATGATGCAATCAAGTTGTGTAAGGCAGACGTGTCCACTGTTTGCTTTGGTCTTGC
TGCATCTATGGGTGCCTTTCTACTGGCTTCGGGCACTAGGGGAAAGAGATATTGCATGCC
AAATGCCCGTGTCATGATTCATCAGCCTCTTGGAGGTGCTAGTGGTTCTGCCATAGAGGT
TGGTTTACAAGTACGAGAGATGATGTATCATAA
■■Homology search results ■■ -
sp_hit_id Q9SXJ6
Definition sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana
Align length 153
Score (bit) 214.0
E-value 5.0e-55
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961959|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_J05, 5'
(693 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic sub... 214 5e-55
sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic sub... 175 2e-43
sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic sub... 175 2e-43
sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic sub... 174 4e-43
sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic sub... 174 4e-43
sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic sub... 173 9e-43
sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic sub... 172 2e-42
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub... 171 4e-42
sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic sub... 170 8e-42
sp|Q8YXH5|CLPP1_ANASP ATP-dependent Clp protease proteolytic sub... 170 8e-42
sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic sub... 169 1e-41
sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic sub... 168 3e-41
sp|Q46ID4|CLPP3_PROMT ATP-dependent Clp protease proteolytic sub... 167 5e-41
sp|Q2SWQ6|CLPP_BURTA ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|Q63V41|CLPP_BURPS ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|A3NAI5|CLPP_BURP6 ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|Q3JRC9|CLPP_BURP1 ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|A3NWA6|CLPP_BURP0 ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|A1V4X1|CLPP_BURMS ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|Q62JK7|CLPP_BURMA ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|A2SBG3|CLPP_BURM9 ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|A3MKJ8|CLPP_BURM7 ATP-dependent Clp protease proteolytic subu... 167 6e-41
sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic sub... 167 6e-41
sp|Q7UA36|CLPP1_SYNPX ATP-dependent Clp protease proteolytic sub... 166 1e-40
sp|Q7V9L6|CLPP3_PROMA ATP-dependent Clp protease proteolytic sub... 166 1e-40
sp|Q317Y6|CLPP4_PROM9 ATP-dependent Clp protease proteolytic sub... 164 3e-40
sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic sub... 164 5e-40
sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subu... 163 7e-40
sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subu... 163 7e-40
sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subu... 163 7e-40

>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic
subunit 3, chloroplastic OS=Arabidopsis thaliana
GN=CLPP3 PE=1 SV=1
Length = 309

Score = 214 bits (544), Expect = 5e-55
Identities = 107/153 (69%), Positives = 129/153 (84%)
Frame = +2

Query: 233 SCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDA 412
S + ++A SP + PS +L D ++MLLRQRI+FLGSQVDD +AD++ISQLLLLDA
Sbjct: 65 SFSIDSVAQSPSRL--PSFEEL---DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDA 119

Query: 413 EDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRY 592
EDS +DI LFINSPGGS+TAGMGIYDA+K CKADVSTVC GLAASMGAFLLASG++GKRY
Sbjct: 120 EDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRY 179

Query: 593 CMPNARVMIHQPLGGASGSAIEVGLQVREMMYH 691
CMPN++VMIHQPLG A G A E+ +++REMMYH
Sbjct: 180 CMPNSKVMIHQPLGTAGGKATEMSIRIREMMYH 212


>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic
subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1
Length = 240

Score = 175 bits (444), Expect = 2e-43
Identities = 90/154 (58%), Positives = 116/154 (75%), Gaps = 3/154 (1%)
Frame = +2

Query: 239 RVQAIAPSPVSV-TAPSMSKLND--FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLD 409
++QAIA S V T S + FD S LLR+RI+FLG+ VDD AD I++QLL L+
Sbjct: 27 QIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLE 86

Query: 410 AEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKR 589
AED KDI+L+INSPGGSVTAGM IYD ++ DV+T+CFGLAASMGAFLL+ G +GKR
Sbjct: 87 AEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKR 146

Query: 590 YCMPNARVMIHQPLGGASGSAIEVGLQVREMMYH 691
+P+AR+MIHQPLGGA G A+++ +Q RE++YH
Sbjct: 147 MALPSARIMIHQPLGGAQGQAVDIEIQAREILYH 180


>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechococcus elongatus (strain PCC 7942)
GN=clpP2 PE=3 SV=1
Length = 240

Score = 175 bits (444), Expect = 2e-43
Identities = 90/154 (58%), Positives = 116/154 (75%), Gaps = 3/154 (1%)
Frame = +2

Query: 239 RVQAIAPSPVSV-TAPSMSKLND--FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLD 409
++QAIA S V T S + FD S LLR+RI+FLG+ VDD AD I++QLL L+
Sbjct: 27 QIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLE 86

Query: 410 AEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKR 589
AED KDI+L+INSPGGSVTAGM IYD ++ DV+T+CFGLAASMGAFLL+ G +GKR
Sbjct: 87 AEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKR 146

Query: 590 YCMPNARVMIHQPLGGASGSAIEVGLQVREMMYH 691
+P+AR+MIHQPLGGA G A+++ +Q RE++YH
Sbjct: 147 MALPSARIMIHQPLGGAQGQAVDIEIQAREILYH 180


>sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic
subunit 4, chloroplastic OS=Arabidopsis thaliana
GN=CLPP4 PE=1 SV=1
Length = 292

Score = 174 bits (441), Expect = 4e-43
Identities = 87/161 (54%), Positives = 119/161 (73%)
Frame = +2

Query: 209 NPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVII 388
+PS LR + ++ +S T S + + D +LLR+RI+FLGS +DDF AD I+
Sbjct: 52 SPSPLRFANASIE------MSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIM 105

Query: 389 SQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLA 568
SQLLLLDA+D KDIKLFINSPGGS++A M IYD ++L +ADVST+ G+AAS + +L
Sbjct: 106 SQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG 165

Query: 569 SGTRGKRYCMPNARVMIHQPLGGASGSAIEVGLQVREMMYH 691
+GT+GKR+ MPN R+MIHQPLGGASG AI+V +Q +E+M++
Sbjct: 166 AGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHN 206


>sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic
subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2
PE=3 SV=1
Length = 232

Score = 174 bits (441), Expect = 4e-43
Identities = 92/164 (56%), Positives = 118/164 (71%)
Frame = +2

Query: 197 ISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSA 376
+SRF SS G + P+ V M + FD S LLR+RIIFLG+ +DD A
Sbjct: 14 LSRFGMSSHLNGIGNIV-----PMVVEQSGMGE-RAFDIYSRLLRERIIFLGTPIDDAVA 67

Query: 377 DVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGA 556
+ I++QLL LDAEDS KDI+L+INSPGGSV AGM IYD I+ + DV T+CFGLAASMGA
Sbjct: 68 NTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGA 127

Query: 557 FLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVGLQVREMMY 688
FLL +GT+GKR +P++R+MIHQPLGGA G AI++ +Q RE++Y
Sbjct: 128 FLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILY 171


>sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic
subunit 3 OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=clpP3 PE=3 SV=2
Length = 214

Score = 173 bits (438), Expect = 9e-43
Identities = 83/128 (64%), Positives = 105/128 (82%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RIIFLG+ +DD A+ I++QLL LDAEDS KDI+L+INSPGGSV AGM I
Sbjct: 26 FDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAI 85

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
YD I+ + DV T+CFGLAASMGAFLL +GT+GKR +P++R+MIHQPLGGA G AI++
Sbjct: 86 YDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIE 145

Query: 665 LQVREMMY 688
+Q RE++Y
Sbjct: 146 IQAREILY 153


>sp|Q3MFR5|CLPP1_ANAVT ATP-dependent Clp protease proteolytic
subunit 1 OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=clpP1 PE=3 SV=1
Length = 204

Score = 172 bits (436), Expect = 2e-42
Identities = 83/129 (64%), Positives = 105/129 (81%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RIIFLG QVD A++I++QLL LDAED KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
+D +K + DV T+C GLAASMGAFLL++GT+GKR +P++R+MIHQPLGGA G A ++
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIE 136

Query: 665 LQVREMMYH 691
+Q RE++YH
Sbjct: 137 IQAREILYH 145


>sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic
subunit 1 OS=Thermosynechococcus elongatus (strain BP-1)
GN=clpP1 PE=3 SV=1
Length = 229

Score = 171 bits (432), Expect = 4e-42
Identities = 86/135 (63%), Positives = 103/135 (76%), Gaps = 6/135 (4%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQ------VDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSV 466
FD S LLR+RIIFLG +DD AD I++QLL LDAED KDI L+INSPGGSV
Sbjct: 43 FDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSV 102

Query: 467 TAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASG 646
TAGM IYD +K + DV T+CFGLAASMGAFLL+ GT GKR +PNAR+MIHQPLGGA G
Sbjct: 103 TAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQG 162

Query: 647 SAIEVGLQVREMMYH 691
A+++ +Q RE++YH
Sbjct: 163 QAVDIEIQAREILYH 177


>sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic
subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1
PE=3 SV=2
Length = 207

Score = 170 bits (430), Expect = 8e-42
Identities = 84/147 (57%), Positives = 111/147 (75%), Gaps = 2/147 (1%)
Frame = +2

Query: 254 APSPVSVTAPSMSKLND--FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTK 427
AP P+ T S D FD S LLR+RIIFLG+ VDD AD +++Q+L L+AED K
Sbjct: 5 APGPLP-TVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEK 63

Query: 428 DIKLFINSPGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNA 607
DI+++INSPGGSVTAG+ IYD ++ DV T+C+GLAASMGAFLL+ GT+GKR +PNA
Sbjct: 64 DIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNA 123

Query: 608 RVMIHQPLGGASGSAIEVGLQVREMMY 688
R+MIHQPLGGA G A+++ +Q +E++Y
Sbjct: 124 RIMIHQPLGGAQGQAVDIEIQAKEILY 150


>sp|Q8YXH5|CLPP1_ANASP ATP-dependent Clp protease proteolytic
subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1
PE=3 SV=1
Length = 204

Score = 170 bits (430), Expect = 8e-42
Identities = 81/129 (62%), Positives = 104/129 (80%)
Frame = +2

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
FD S LLR+RI+FLG QVD A++I++QLL LDAED KDI L+INSPGGSVTAGMGI
Sbjct: 17 FDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGI 76

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
+D +K + DV T+C GLAASMGAFLL++G +GKR +P++R+MIHQPLGGA G A ++
Sbjct: 77 FDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIE 136

Query: 665 LQVREMMYH 691
+Q RE++YH
Sbjct: 137 IQAREILYH 145


tr_hit_id A9RYV9
Definition tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Physcomitrella patens subsp. patens
Align length 132
Score (bit) 236.0
E-value 1.0e-60
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961959|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_J05, 5'
(693 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su... 236 1e-60
tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su... 232 2e-59
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su... 231 3e-59
tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su... 231 4e-59
tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su... 228 2e-58
tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su... 224 4e-57
tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su... 223 1e-56
tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot... 222 2e-56
tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su... 222 2e-56
tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic... 218 3e-55
tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su... 217 5e-55
tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su... 215 2e-54
tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su... 214 4e-54
tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su... 214 4e-54
tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su... 202 1e-50
tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su... 197 5e-49
tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su... 197 5e-49
tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su... 183 8e-45
tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su... 183 1e-44
tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su... 181 5e-44
tr|A0YKN7|A0YKN7_9CYAN ATP-dependent Clp protease proteolytic su... 176 2e-42
tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su... 175 2e-42
tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic su... 171 3e-41
tr|Q05UN0|Q05UN0_9SYNE ATP-dependent Clp protease proteolytic su... 170 7e-41
tr|B5W1F7|B5W1F7_SPIMA ATP-dependent Clp protease, proteolytic s... 170 7e-41
tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic su... 170 7e-41
tr|B4AWU3|B4AWU3_9CHRO ATP-dependent Clp protease, proteolytic s... 170 9e-41
tr|Q118P5|Q118P5_TRIEI ATP-dependent Clp protease proteolytic su... 169 1e-40
tr|B2IW42|B2IW42_NOSP7 ATP-dependent Clp protease, proteolytic s... 169 1e-40
tr|Q4C1E0|Q4C1E0_CROWT ATP-dependent Clp protease proteolytic su... 169 1e-40

>tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic
subunit (Fragment) OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_25674 PE=3 SV=1
Length = 205

Score = 236 bits (602), Expect = 1e-60
Identities = 116/132 (87%), Positives = 126/132 (95%)
Frame = +2

Query: 296 LNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAG 475
L D DP++MLL+QRI+FLGSQVDDFSADVIISQLLLLDA+D TKDIKLFINSPGGSVTAG
Sbjct: 1 LQDLDPATMLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAG 60

Query: 476 MGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAI 655
MGIYDA+KLCKADVSTVCFGLAASMGAFLLA+GT+GKRYCMPNARVMIHQPLGGA G+AI
Sbjct: 61 MGIYDAMKLCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARVMIHQPLGGAGGTAI 120

Query: 656 EVGLQVREMMYH 691
+ LQVREMMYH
Sbjct: 121 DGALQVREMMYH 132


>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 341

Score = 232 bits (591), Expect = 2e-59
Identities = 127/189 (67%), Positives = 142/189 (75%)
Frame = +2

Query: 125 SPQSLSSCRESALSGPLSLPRTCRISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSKLND 304
SP C S+ S S R + S RGS + A S + ++ M + D
Sbjct: 40 SPPCCFVCSCSSASHLGSRQRMQAVKPIGALSSSRGS--LSASLDSVGTSSSLWMPRPED 97

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
D +SMLLRQRI+FLGSQVDD SAD IISQLLLLD EDSTKDIKLFINSPGGSVTAGMGI
Sbjct: 98 LDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTAGMGI 157

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
YDA+KLCKADVSTVCFGLAASMGAFLLASGTRGKR+CMPNA+VMIHQPLGG GSAIE+
Sbjct: 158 YDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSAIEMA 217

Query: 665 LQVREMMYH 691
LQ +E+MYH
Sbjct: 218 LQAKELMYH 226


>tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 341

Score = 231 bits (590), Expect = 3e-59
Identities = 126/189 (66%), Positives = 141/189 (74%), Gaps = 16/189 (8%)
Frame = +2

Query: 173 LSLPRTCRISRFNPSSLRRGSCRVQAIAPSPV-------------SVTAPS---MSKLND 304
LS P C + + +S R+QA+ P+ SV S M + D
Sbjct: 38 LSSPPCCFVCSCSSASHLGSRQRMQAVKPNGALSSSRGSLSASLDSVGTSSSLWMPRPED 97

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
D +SMLLRQRI+FLGSQVDD SAD IISQLLLLD EDSTKDIKLFINSPGGSVTAGMGI
Sbjct: 98 LDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTAGMGI 157

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
YDA+KLCKADVSTVCFGLAASMGAFLLASGTRGKR+CMPNA+VMIHQPLGG GSAIE+
Sbjct: 158 YDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSAIEMA 217

Query: 665 LQVREMMYH 691
LQ +E+MYH
Sbjct: 218 LQAKELMYH 226


>tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic
subunit OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_141000 PE=3 SV=1
Length = 243

Score = 231 bits (588), Expect = 4e-59
Identities = 111/134 (82%), Positives = 126/134 (94%)
Frame = +2

Query: 290 SKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVT 469
++L D DP +MLL+QRI+FLGSQVDDFSAD+IISQ+LLLDA+D T+DIKLFINSPGGSVT
Sbjct: 14 ARLQDLDPGTMLLQQRILFLGSQVDDFSADLIISQMLLLDAQDPTRDIKLFINSPGGSVT 73

Query: 470 AGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGS 649
AGMGIYDA+KLCKADVSTVCFGLAASMGAFLL +GT+GKRYCMPNARVMIHQPLGGA G+
Sbjct: 74 AGMGIYDAMKLCKADVSTVCFGLAASMGAFLLTAGTKGKRYCMPNARVMIHQPLGGAGGT 133

Query: 650 AIEVGLQVREMMYH 691
AI+ LQVREMM+H
Sbjct: 134 AIDGALQVREMMFH 147


>tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic
subunit 1 OS=Zea mays PE=2 SV=1
Length = 285

Score = 228 bits (582), Expect = 2e-58
Identities = 124/197 (62%), Positives = 145/197 (73%), Gaps = 6/197 (3%)
Frame = +2

Query: 116 AAVSPQSLSSCRESALSGPLSLPR---TCRISRFNPSSLRRGSCRVQAI-APSPVSVTAP 283
A ++P S R SA P S R R + S++ R V A PS ++V P
Sbjct: 3 AFLAPPCTSFYRSSAFLTPCSSNRRSTALRAAAVRGSAVTRAQRTVSARWVPSRLAVARP 62

Query: 284 SMSK--LNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPG 457
+ K L + D ++MLLRQRI+FLGS VDD SAD+IISQLLLLDAED TKDIKLFINSPG
Sbjct: 63 AARKACLEELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPG 122

Query: 458 GSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGG 637
GS+TAGMG+YDA+K CKADVSTVCFGLAASMGAFLLA+GT+GKRYC PNAR+MIHQP GG
Sbjct: 123 GSITAGMGVYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCXPNARIMIHQPSGG 182

Query: 638 ASGSAIEVGLQVREMMY 688
A G E+GLQ+REMMY
Sbjct: 183 AGGKVTEMGLQIREMMY 199


>tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa subsp. japonica GN=Os01g0507900
PE=2 SV=1
Length = 314

Score = 224 bits (571), Expect = 4e-57
Identities = 117/199 (58%), Positives = 143/199 (71%), Gaps = 8/199 (4%)
Frame = +2

Query: 116 AAVSPQSLSSCRESALSGPLSL-PRTCRISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMS 292
AA++ S C S+ L L P C +++R + + S + PS +
Sbjct: 5 AAMAALPASPCSSSSSPSSLFLAPNPCCWKAAPRATVRASASAARRTLSSAWELPGPSAA 64

Query: 293 K-------LNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINS 451
+ L + D ++MLLRQRI+FLGS VDD SAD+IISQLLLLDAED TKDIKLFINS
Sbjct: 65 RPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINS 124

Query: 452 PGGSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPL 631
PGGS+TAGMG+YDA+K CKAD+STVCFGLAASMGAFLLA+GT+GKR+CMPNAR+MIHQP
Sbjct: 125 PGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPS 184

Query: 632 GGASGSAIEVGLQVREMMY 688
GGA G E+GLQ+REMMY
Sbjct: 185 GGAGGKVTEMGLQIREMMY 203


>tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic
subunit OS=Vitis vinifera GN=GSVIVT00022336001 PE=3 SV=1
Length = 320

Score = 223 bits (567), Expect = 1e-56
Identities = 119/187 (63%), Positives = 140/187 (74%), Gaps = 8/187 (4%)
Frame = +2

Query: 155 SALSGPLSLPRTCRISR-------FNPSSLRRGSCRVQAIAPSPVSVTAPS-MSKLNDFD 310
S S L LP T R SR SS R + S S +AP+ + + D D
Sbjct: 22 SPSSSSLWLPSTSRSSRKGRAVSMVKASSASRPTLASNWDLSSLQSASAPTWLPRFEDLD 81

Query: 311 PSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGIYD 490
++MLLRQRI+FLGSQVDD +AD++ISQLL LDAED KDIKLFINSPGGSVTAG+GIYD
Sbjct: 82 TTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYD 141

Query: 491 AIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVGLQ 670
A+KLCKADVSTVC GLAASMGAFLLASG++GKR+CMPN+RVMIHQPLG A G A E+G++
Sbjct: 142 AMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGIR 201

Query: 671 VREMMYH 691
+REMMYH
Sbjct: 202 IREMMYH 208


>tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease,
proteolytic subunit (Putative uncharacterized protein)
OS=Oryza sativa subsp. japonica GN=OSJNBa0094H06.31 PE=4
SV=1
Length = 308

Score = 222 bits (566), Expect = 2e-56
Identities = 115/188 (61%), Positives = 139/188 (73%), Gaps = 10/188 (5%)
Frame = +2

Query: 155 SALSGPLSL---PRTCRISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSK-------LND 304
S+ S P SL P C +++R + + S + PS ++ L +
Sbjct: 10 SSSSSPSSLFLAPNPCCWKAAPRATVRASASAARRTLSSAWELPGPSAARPAARKPRLEE 69

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
D ++MLLRQRI+FLGS VDD SAD+IISQLLLLDAED TKDIKLFINSPGGS+TAGMG+
Sbjct: 70 LDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGV 129

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
YDA+K CKAD+STVCFGLAASMGAFLLA+GT+GKR+CMPNAR+MIHQP GGA G E+G
Sbjct: 130 YDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMG 189

Query: 665 LQVREMMY 688
LQ+REMMY
Sbjct: 190 LQIREMMY 197


>tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa subsp. indica GN=OsI_02123 PE=3
SV=1
Length = 308

Score = 222 bits (566), Expect = 2e-56
Identities = 115/188 (61%), Positives = 139/188 (73%), Gaps = 10/188 (5%)
Frame = +2

Query: 155 SALSGPLSL---PRTCRISRFNPSSLRRGSCRVQAIAPSPVSVTAPSMSK-------LND 304
S+ S P SL P C +++R + + S + PS ++ L +
Sbjct: 10 SSSSSPSSLFLAPNPCCWKAAPRATVRASASAARRTLSSAWELPGPSAARPAARKPRLEE 69

Query: 305 FDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPGGSVTAGMGI 484
D ++MLLRQRI+FLGS VDD SAD+IISQLLLLDAED TKDIKLFINSPGGS+TAGMG+
Sbjct: 70 LDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGV 129

Query: 485 YDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGGASGSAIEVG 664
YDA+K CKAD+STVCFGLAASMGAFLLA+GT+GKR+CMPNAR+MIHQP GGA G E+G
Sbjct: 130 YDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEMG 189

Query: 665 LQVREMMY 688
LQ+REMMY
Sbjct: 190 LQIREMMY 197


>tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 297

Score = 218 bits (555), Expect = 3e-55
Identities = 103/138 (74%), Positives = 121/138 (87%)
Frame = +2

Query: 278 APSMSKLNDFDPSSMLLRQRIIFLGSQVDDFSADVIISQLLLLDAEDSTKDIKLFINSPG 457
+P + K + D ++MLLRQRI+FLGSQVDD +AD +ISQLL LDA+D TKDIKLFINSPG
Sbjct: 69 SPWLPKFEELDTTNMLLRQRIVFLGSQVDDMTADFVISQLLFLDADDPTKDIKLFINSPG 128

Query: 458 GSVTAGMGIYDAIKLCKADVSTVCFGLAASMGAFLLASGTRGKRYCMPNARVMIHQPLGG 637
GSVTAGMG+YDA+KLCKADVSTVC GLAASMGAFLLA+GT+GKRYCMPN+RVMIHQPLG
Sbjct: 129 GSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKGKRYCMPNSRVMIHQPLGS 188

Query: 638 ASGSAIEVGLQVREMMYH 691
A G A E+ ++ RE+MYH
Sbjct: 189 AGGKATEMSIRARELMYH 206