DK961960 |
Clone id |
TST39A01NGRL0011_J06 |
Library |
TST39 |
Length |
610 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_J06. 5' end sequence. |
Accession |
DK961960 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1933Contig1 |
Sequence |
GCATATTCTCGTTCGCCTGCCTGTGTGTATTCTGGGGGAGGCAGGCTCTTCTCTGTATAA TTATATATGCAGCTTCCATGGAAGCTTGAGTGGCTTCTTTTGGGTCACGATCGTTGCCAT TCTGTGCACAGTTTTCAACTCATTTTGCTTGGATAAGGGCGGCGGTGGTCATCTCAGCTC AGTAGCTTCTAAAAATCGTCACTGCTTGAGAGAGAGAGAGAGAGAGAGCCTACTGGGATT GAACCCTTAATCAAATACCGAAATAAGCTGCTCATTCCGTTCATCATCTAGGGAATGCAT CAGATTGAGAGGTTTGCAGGTGGCAGGGGAACATTACCACATTATGTGCAACCAGTTGTC AGTCAAATGCAAGAAGGTGATTCCTTGGTAGGTACAGGAGTCATTCTTTCTGCAGATCCC AAGCCCCGCCTGCGATGGACTGCCGAGCTTCACAAAAGATTTGTTGATGCTGTCATGCAG CTTGGAGGGGCTGACAAGGCCACTCCAAAATCTGTCATGAAGGCGATGAATGTGAAGGGT TTAACTTTGTATCATTTGAAGAGCCATCTGCAGAAGTACCGACTCGGGAAGCAACCACAA AGGGACACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q700D9 |
Definition |
sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana |
Align length |
71 |
Score (bit) |
79.7 |
E-value |
1.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6Z8D2 |
Definition |
tr|Q6Z8D2|Q6Z8D2_ORYSJ Phosphate starvation response regulator-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica |
Align length |
78 |
Score (bit) |
123.0 |
E-value |
7.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961960|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_J06, 5' (610 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6Z8D2|Q6Z8D2_ORYSJ Phosphate starvation response regulator-l... 123 7e-27 tr|Q0DYD6|Q0DYD6_ORYSJ Os02g0700300 protein OS=Oryza sativa subs... 123 7e-27 tr|A2X8M6|A2X8M6_ORYSI Putative uncharacterized protein OS=Oryza... 123 7e-27 tr|A7QFS0|A7QFS0_VITVI Chromosome undetermined scaffold_89, whol... 123 1e-26 tr|A5C7D8|A5C7D8_VITVI Putative uncharacterized protein OS=Vitis... 123 1e-26 tr|Q49QW7|Q49QW7_POPTO Myb family transcription factor-related p... 122 2e-26 tr|Q9SAK5|Q9SAK5_ARATH T8K14.15 protein OS=Arabidopsis thaliana ... 121 3e-26 tr|Q6H510|Q6H510_ORYSJ Myb family transcription factor-like OS=O... 121 3e-26 tr|Q0E3H9|Q0E3H9_ORYSJ Os02g0174000 protein OS=Oryza sativa subs... 121 3e-26 tr|B7FKL9|B7FKL9_MEDTR Putative uncharacterized protein OS=Medic... 121 3e-26 tr|B7FHJ4|B7FHJ4_MEDTR Putative uncharacterized protein OS=Medic... 121 3e-26 tr|A7QMK6|A7QMK6_VITVI Chromosome chr19 scaffold_126, whole geno... 121 3e-26 tr|A5ASR1|A5ASR1_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|A9TC07|A9TC07_PHYPA Predicted protein (Fragment) OS=Physcomit... 120 6e-26 tr|A9RT15|A9RT15_PHYPA Predicted protein OS=Physcomitrella paten... 120 6e-26 tr|A9RJW4|A9RJW4_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|A9S4D5|A9S4D5_PHYPA Predicted protein (Fragment) OS=Physcomit... 118 2e-25 tr|Q84QT1|Q84QT1_ORYSJ Os08g0346400 protein OS=Oryza sativa subs... 118 3e-25 tr|A7Q757|A7Q757_VITVI Chromosome chr5 scaffold_58, whole genome... 118 3e-25 tr|A9RJ19|A9RJ19_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 4e-25 tr|A9PEQ8|A9PEQ8_POPTR Putative uncharacterized protein OS=Popul... 117 4e-25 tr|Q9LTW1|Q9LTW1_ARATH Similarity to transfactor OS=Arabidopsis ... 117 5e-25 tr|Q8VYI2|Q8VYI2_ARATH AT3g12730/MBK21_9 OS=Arabidopsis thaliana... 117 5e-25 tr|B4FPL5|B4FPL5_MAIZE Myb family transcription factor-related p... 117 5e-25 tr|Q0DAA8|Q0DAA8_ORYSJ Os06g0664800 protein (Fragment) OS=Oryza ... 116 9e-25 tr|B8B119|B8B119_ORYSI Putative uncharacterized protein OS=Oryza... 116 9e-25 tr|A7R1A4|A7R1A4_VITVI Chromosome undetermined scaffold_342, who... 116 9e-25 tr|A3BED5|A3BED5_ORYSJ Putative uncharacterized protein OS=Oryza... 116 9e-25 tr|B6TVN5|B6TVN5_MAIZE Myb family transcription factor-related p... 116 1e-24 tr|B6TBR6|B6TBR6_MAIZE Myb family transcription factor-related p... 116 1e-24
>tr|Q6Z8D2|Q6Z8D2_ORYSJ Phosphate starvation response regulator-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0459B01.38 PE=4 SV=1 Length = 284
Score = 123 bits (309), Expect = 7e-27 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 376 GDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLYH 555 G VG GV+LS DPKPRLRWT +LH+RFV+AV +LGG DKATPKSV++ M +KGLTLYH Sbjct: 12 GAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYH 71
Query: 556 LKSHLQKYRLGKQPQRDT 609 LKSHLQKYRLGKQ ++DT Sbjct: 72 LKSHLQKYRLGKQNKKDT 89
>tr|Q0DYD6|Q0DYD6_ORYSJ Os02g0700300 protein OS=Oryza sativa subsp. japonica GN=Os02g0700300 PE=2 SV=1 Length = 288
Score = 123 bits (309), Expect = 7e-27 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 376 GDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLYH 555 G VG GV+LS DPKPRLRWT +LH+RFV+AV +LGG DKATPKSV++ M +KGLTLYH Sbjct: 16 GAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYH 75
Query: 556 LKSHLQKYRLGKQPQRDT 609 LKSHLQKYRLGKQ ++DT Sbjct: 76 LKSHLQKYRLGKQNKKDT 93
>tr|A2X8M6|A2X8M6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08588 PE=4 SV=1 Length = 284
Score = 123 bits (309), Expect = 7e-27 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 376 GDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLYH 555 G VG GV+LS DPKPRLRWT +LH+RFV+AV +LGG DKATPKSV++ M +KGLTLYH Sbjct: 12 GAGAVGAGVVLSRDPKPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYH 71
Query: 556 LKSHLQKYRLGKQPQRDT 609 LKSHLQKYRLGKQ ++DT Sbjct: 72 LKSHLQKYRLGKQNKKDT 89
>tr|A7QFS0|A7QFS0_VITVI Chromosome undetermined scaffold_89, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037529001 PE=4 SV=1 Length = 243
Score = 123 bits (308), Expect = 1e-26 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 11 QGDS----GLVLTTDPKPRLRWTTELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLY 66
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP +D Sbjct: 67 HLKSHLQKFRLGKQPHKD 84
>tr|A5C7D8|A5C7D8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002732 PE=4 SV=1 Length = 253
Score = 123 bits (308), Expect = 1e-26 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 11 QGDS----GLVLTTDPKPRLRWTTELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLY 66
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP +D Sbjct: 67 HLKSHLQKFRLGKQPHKD 84
>tr|Q49QW7|Q49QW7_POPTO Myb family transcription factor-related protein OS=Populus tomentosa PE=2 SV=1 Length = 356
Score = 122 bits (306), Expect = 2e-26 Identities = 57/78 (73%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 20 QGDS----GLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLY 75
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP +D Sbjct: 76 HLKSHLQKFRLGKQPLKD 93
>tr|Q9SAK5|Q9SAK5_ARATH T8K14.15 protein OS=Arabidopsis thaliana GN=T8K14.15 PE=4 SV=1 Length = 367
Score = 121 bits (304), Expect = 3e-26 Identities = 56/78 (71%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 22 QGDS----GLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLY 77
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP ++ Sbjct: 78 HLKSHLQKFRLGKQPHKE 95
>tr|Q6H510|Q6H510_ORYSJ Myb family transcription factor-like OS=Oryza sativa subsp. japonica GN=OSJNBa0073A21.20 PE=4 SV=1 Length = 355
Score = 121 bits (304), Expect = 3e-26 Identities = 56/78 (71%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 4 QGDS----GLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLY 59
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP ++ Sbjct: 60 HLKSHLQKFRLGKQPHKE 77
>tr|Q0E3H9|Q0E3H9_ORYSJ Os02g0174000 protein OS=Oryza sativa subsp. japonica GN=Os02g0174000 PE=4 SV=1 Length = 383
Score = 121 bits (304), Expect = 3e-26 Identities = 56/78 (71%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 32 QGDS----GLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLY 87
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP ++ Sbjct: 88 HLKSHLQKFRLGKQPHKE 105
>tr|B7FKL9|B7FKL9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 345
Score = 121 bits (304), Expect = 3e-26 Identities = 56/78 (71%), Positives = 67/78 (85%) Frame = +1
Query: 373 EGDSLVGTGVILSADPKPRLRWTAELHKRFVDAVMQLGGADKATPKSVMKAMNVKGLTLY 552 +GDS G++L+ DPKPRLRWT ELH+RFVDAV QLGG DKATPK++M+ M VKGLTLY Sbjct: 25 QGDS----GLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLY 80
Query: 553 HLKSHLQKYRLGKQPQRD 606 HLKSHLQK+RLGKQP ++ Sbjct: 81 HLKSHLQKFRLGKQPHKE 98
|