BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961961|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_J07, 5'
         (653 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma w...    32   3.8  
sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma w...    32   3.8  
sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3    31   6.5  

>sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma
           whipplei (strain Twist) GN=tilS PE=3 SV=1
          Length = 415

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
 Frame = +1

Query: 325 SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPKER--NETV 480
           ++R TNA I+ R G   R   D+ + +   I     LD W+     D+   + R  +  +
Sbjct: 231 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 290

Query: 481 NVLENEVTQKCNNALEASSLLATVD 555
            VLENE+      AL  ++ LA +D
Sbjct: 291 PVLENEIGPGVKYALSRTAKLAQLD 315


>sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma
           whipplei (strain TW08/27) GN=tilS PE=3 SV=1
          Length = 407

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
 Frame = +1

Query: 325 SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPKER--NETV 480
           ++R TNA I+ R G   R   D+ + +   I     LD W+     D+   + R  +  +
Sbjct: 223 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 282

Query: 481 NVLENEVTQKCNNALEASSLLATVD 555
            VLENE+      AL  ++ LA +D
Sbjct: 283 PVLENEIGPGVKYALSRTAKLAQLD 307


>sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3
          Length = 1838

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
 Frame = -1

Query: 479 TVSFL--SFGKIMSIVLSPDQTSKE----MVEASA*AKSHLVLCPNLFSIPAL 339
           TV+FL  S G+I+ + L+PD TS E    +VE +   K  LVL  +L S+ A+
Sbjct: 404 TVAFLGTSDGRILKVYLTPDGTSSEYDSILVEINKRVKRDLVLSGDLGSLYAM 456

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961961|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_J07, 5'
         (653 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer m...    38   0.62 
tr|Q69B32|Q69B32_9SOLA Glutamine synthetase OS=Nicotiana attenua...    34   6.8  

>tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer
            membrane protein OS=Trichodesmium erythraeum (strain
            IMS101) GN=Tery_3830 PE=3 SV=1
          Length = 3537

 Score = 37.7 bits (86), Expect = 0.62
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +1

Query: 343  AGIEKRLGQSTRCDLAQADASTISLDVWSGERTIDMILPKERNETVNVLENEVTQKCNNA 522
            AG EK +GQ T+     A+ +TI++   SGE+ I+ I     NE++N+ + E+ Q  +  
Sbjct: 2972 AGGEKNIGQVTQ----NAENNTINIQTASGEQNIEQINQTFGNESINIQDQEINQSLDTT 3027

Query: 523  LEASS 537
               S+
Sbjct: 3028 SAISN 3032


>tr|Q69B32|Q69B32_9SOLA Glutamine synthetase OS=Nicotiana attenuata
           PE=2 SV=1
          Length = 432

 Score = 34.3 bits (77), Expect = 6.8
 Identities = 23/76 (30%), Positives = 35/76 (46%)
 Frame = +1

Query: 223 AGPVTSSPWQGNVAKHLKRLNVRRLVISQVYSMLSSRATNAGIEKRLGQSTRCDLAQADA 402
           A P+TS  W   V K  KRL V+     +V+++ S    ++G   R+ Q    D+     
Sbjct: 22  ANPLTSKMWSSVVLKQNKRLAVKSSAKFRVFALQS----DSGTVNRVEQLLNLDVTPYTD 77

Query: 403 STISLDVWSGERTIDM 450
             I+  +W G   IDM
Sbjct: 78  KIIAEYIWIGGSGIDM 93