DK961965 |
Clone id |
TST39A01NGRL0011_J11 |
Library |
TST39 |
Length |
651 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_J11. 5' end sequence. |
Accession |
DK961965 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
CGCAGCCATCTCCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTC TTCCTCCGTTTCTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCG CGCCCGCTCGTCGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTC CTTCAAGTTTGAGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACAT GACAGACATGATCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGG CCTGTCATGTGCGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCA GTCTGTAAGCCCAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGT AAGGAAGCCAGCCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATAC CTATGTTGTTATCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGC CAGGCCAAATGTGAAGCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAAGGAGAA TCGTGTAGCGAGTGTGGTCACAAATTGGGCTCTTGTGTCTATGAACCATAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
156 |
Score (bit) |
274.0 |
E-value |
3.0e-73 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961965|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_J11, 5' (651 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 274 3e-73 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 270 5e-72 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 264 3e-70 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 260 4e-69 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 258 2e-68 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 211 2e-54 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 205 1e-52 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 199 8e-51 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 196 1e-49 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 191 2e-48 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 191 3e-48 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 107 5e-23 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 104 5e-22 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 101 3e-21 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 97 7e-20 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 94 6e-19 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 88 3e-17 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 83 1e-15 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 82 3e-15 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 80 9e-15 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 80 9e-15 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 79 2e-14 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 79 2e-14 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 78 5e-14 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 75 3e-13 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 75 3e-13 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 72 3e-12 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 71 4e-12 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 71 4e-12 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 71 6e-12
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 274 bits (701), Expect = 3e-73 Identities = 132/156 (84%), Positives = 146/156 (93%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 542 RPNVKLFNAVAAEDLIIKENRVASVVTNWALVSMNH 649 RPNVKLFNAVAAEDLI+K RV VVTNWALVSMNH Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 218
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 270 bits (690), Expect = 5e-72 Identities = 133/156 (85%), Positives = 145/156 (92%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 542 RPNVKLFNAVAAEDLIIKENRVASVVTNWALVSMNH 649 RPNVKLFNAVAAEDLI+K NRV VVTNWALV+ NH Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNH 211
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 264 bits (675), Expect = 3e-70 Identities = 128/156 (82%), Positives = 141/156 (90%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 542 RPNVKLFNAVAAEDLIIKENRVASVVTNWALVSMNH 649 RPNVKLFNAVA EDLI++ RV VVTNWALVSMNH Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNH 214
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 260 bits (665), Expect = 4e-69 Identities = 128/156 (82%), Positives = 140/156 (89%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 542 RPNVKLFNAVAAEDLIIKENRVASVVTNWALVSMNH 649 RPNVKLFNAVA EDLI++ RV VVTNWALVSMNH Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNH 217
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 258 bits (659), Expect = 2e-68 Identities = 128/156 (82%), Positives = 141/156 (90%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 542 RPNVKLFNAVAAEDLIIKENRVASVVTNWALVSMNH 649 RPNVKLFNAVAAEDLI+K RV VVTNWALVSMNH Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNH 214
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 211 bits (538), Expect = 2e-54 Identities = 104/162 (64%), Positives = 131/162 (80%), Gaps = 6/162 (3%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 358 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 539 ARPNVKLFNAVAAEDLIIKE-----NRVASVVTNWALVSMNH 649 A PNVKLFNA A EDLI+KE R+A VVTNW LVS+NH Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNH 210
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 205 bits (522), Expect = 1e-52 Identities = 104/161 (64%), Positives = 125/161 (77%), Gaps = 5/161 (3%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 539 ARPNVKLFNAVAAEDLIIKEN----RVASVVTNWALVSMNH 649 PN+KLFNA EDLI + + R+A VVTNW LVSM+H Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHH 204
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 199 bits (507), Expect = 8e-51 Identities = 101/161 (62%), Positives = 123/161 (76%), Gaps = 5/161 (3%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 539 ARPNVKLFNAVAAEDLIIKEN----RVASVVTNWALVSMNH 649 PN KLFNA EDLI + + R++ VVTNW LVSM+H Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHH 208
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 196 bits (497), Expect = 1e-49 Identities = 102/164 (62%), Positives = 129/164 (78%), Gaps = 8/164 (4%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 532 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 533 LLARPNVKLFNAVAAEDLIIK--EN---RVASVVTNWALVSMNH 649 +L+ PNVKLFNA A EDLI + EN ++A VV NW LV+++H Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHH 211
>sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1 Length = 338
Score = 191 bits (486), Expect = 2e-48 Identities = 96/163 (58%), Positives = 119/163 (73%), Gaps = 8/163 (4%) Frame = +2
Query: 185 KFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVEQ 361 KF PI+E V R M RRY DM A +D GAGSAGLSCAY L + P++K+ I+E Sbjct: 54 KFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILES 113
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 +V+PGGG WLGGQL SAM+ RKPA FLD++GVPY+++ +VV+KHAALFTST++SK+LA Sbjct: 114 NVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLA 173
Query: 542 RPNVKLFNAVAAEDLIIKE-------NRVASVVTNWALVSMNH 649 PNVK+FNA A EDLIIK R+A VTNW LVS+NH Sbjct: 174 MPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNH 216
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
156 |
Score (bit) |
283.0 |
E-value |
8.0e-75 |
Report |
|