DK961997 |
Clone id |
TST39A01NGRL0011_K20 |
Library |
TST39 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_K20. 5' end sequence. |
Accession |
DK961997 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1176Contig1 |
Sequence |
TGACGAACCCGGTCCGCCATAGCTCGCCCCAGCCATGGCTGCGTTTACTCTTCTACTGCA GATCTGTGTCATTTTCTCCGCCTCCCTGCACTACATCCTCACAGACGCCCATGTCTTCTT TGAAGAGAAATTTGACGATCGTTGGGAGAATCGTTGGGTCAAGTCAGATTGGAAGAAAAG TGAGGGTGCCGCGGGTGATTGGCTGCATACAGCACGAAAATGGCACGGGGACCCTGATGA TAAAGGAATTCAGACCCATCCTGACTCTCGATTTTTTGCAATCTCATCTGAGTTTCCTGA ATTTTCCAACAAGGACAAGAACCTTGTTCTTCAATTTTCTGTGAAACATGAGCAGGATCT TGATTGTGGTGGTGGCTATATCAAGCTATTAAGTGGTGATGTTGATCAACAGAATTTTGG TGGAGACACACCTTACAGTATTATGTTTGGACCTGATATCTGTGGATATAGCACAAAGAA GGTTCATGTTATTCTTTCATACTAAGGGAAGAATCACCCCATCGAGAATGACATCCCTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLY8 |
Definition |
sp|Q9SLY8|CALR_ORYSJ Calreticulin OS=Oryza sativa subsp. japonica |
Align length |
142 |
Score (bit) |
239.0 |
E-value |
8.0e-63 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LP55 |
Definition |
tr|B8LP55|B8LP55_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
146 |
Score (bit) |
264.0 |
E-value |
2.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961997|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_K20, 5' (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LP55|B8LP55_PICSI Putative uncharacterized protein OS=Picea... 264 2e-69 tr|A9NS22|A9NS22_PICSI Putative uncharacterized protein OS=Picea... 264 2e-69 tr|Q9FYV2|Q9FYV2_PINTA Calreticulin OS=Pinus taeda PE=2 SV=1 253 4e-66 tr|A9NUL6|A9NUL6_PICSI Putative uncharacterized protein OS=Picea... 252 8e-66 tr|Q5MCL9|Q5MCL9_WHEAT Calreticulin-like protein OS=Triticum aes... 243 6e-63 tr|A7PRT0|A7PRT0_VITVI Chromosome chr14 scaffold_27, whole genom... 243 6e-63 tr|A0A762|A0A762_SOYBN Calreticulin-1 OS=Glycine max GN=Gm crt-1... 241 1e-62 tr|Q40041|Q40041_HORVU Calreticulin (Fragment) OS=Hordeum vulgar... 241 2e-62 tr|Q40040|Q40040_HORVU Calreticulin (Fragment) OS=Hordeum vulgar... 241 2e-62 tr|A5B3R5|A5B3R5_VITVI Putative uncharacterized protein OS=Vitis... 240 4e-62 tr|Q8LC80|Q8LC80_ARATH Putative calcium-binding protein, calreti... 239 9e-62 tr|Q0D7H6|Q0D7H6_ORYSJ Os07g0246200 protein OS=Oryza sativa subs... 239 9e-62 tr|B8B4R4|B8B4R4_ORYSI Putative uncharacterized protein OS=Oryza... 239 9e-62 tr|B7EW55|B7EW55_ORYSJ cDNA clone:001-028-H03, full insert seque... 239 9e-62 tr|Q8H792|Q8H792_ARATH Putative uncharacterized protein (Fragmen... 238 2e-61 tr|Q43712|Q43712_MAIZE Calcium-binding protein OS=Zea mays GN=CR... 237 3e-61 tr|Q7Y140|Q7Y140_ORYSJ Os03g0832200 protein OS=Oryza sativa subs... 236 6e-61 tr|B5M6X8|B5M6X8_TOBAC Calreticulin OS=Nicotiana tabacum PE=2 SV=1 236 6e-61 tr|Q40567|Q40567_TOBAC Tobacco calretulin (Fragment) OS=Nicotian... 235 1e-60 tr|A9PEC9|A9PEC9_POPTR Putative uncharacterized protein OS=Popul... 232 8e-60 tr|A3APE3|A3APE3_ORYSJ Putative uncharacterized protein OS=Oryza... 228 2e-58 tr|A9NMR1|A9NMR1_PICSI Putative uncharacterized protein OS=Picea... 227 3e-58 tr|A3BI81|A3BI81_ORYSJ Putative uncharacterized protein OS=Oryza... 225 1e-57 tr|B8LRK0|B8LRK0_PICSI Putative uncharacterized protein OS=Picea... 224 2e-57 tr|A5C9U1|A5C9U1_VITVI Putative uncharacterized protein OS=Vitis... 222 1e-56 tr|A7PV40|A7PV40_VITVI Chromosome chr4 scaffold_32, whole genome... 221 2e-56 tr|Q8LJ85|Q8LJ85_ORYSJ Putative calreticulin OS=Oryza sativa sub... 214 2e-54 tr|Q0JGY7|Q0JGY7_ORYSJ Os01g0895600 protein OS=Oryza sativa subs... 214 2e-54 tr|A3A0H5|A3A0H5_ORYSJ Putative uncharacterized protein OS=Oryza... 214 2e-54 tr|A2WXW7|A2WXW7_ORYSI Putative uncharacterized protein OS=Oryza... 214 2e-54
>tr|B8LP55|B8LP55_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 401
Score = 264 bits (675), Expect = 2e-69 Identities = 117/146 (80%), Positives = 132/146 (90%) Frame = +2
Query: 98 LTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFF 277 ++ AHV+ +E+FDD WENRWV SDWKK EGAAG+WLHTA KW+GDPDDKGIQTHPD+RFF Sbjct: 19 ISSAHVYLDERFDDGWENRWVISDWKKDEGAAGEWLHTAGKWNGDPDDKGIQTHPDARFF 78
Query: 278 AISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPD 457 AIS+EFPEF+NKDK LVLQFSVKHEQ LDCGGGY+KLLSGDVDQ+ FGGDTPYSIMFGPD Sbjct: 79 AISAEFPEFNNKDKTLVLQFSVKHEQKLDCGGGYVKLLSGDVDQKKFGGDTPYSIMFGPD 138
Query: 458 ICGYSTKKVHVILSY*GKNHPIENDI 535 ICGYSTKKVH IL + GKN PI+ D+ Sbjct: 139 ICGYSTKKVHAILGHGGKNLPIKKDV 164
>tr|A9NS22|A9NS22_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 401
Score = 264 bits (675), Expect = 2e-69 Identities = 117/146 (80%), Positives = 132/146 (90%) Frame = +2
Query: 98 LTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFF 277 ++ AHV+ +E+FDD WENRWV SDWKK EGAAG+WLHTA KW+GDPDDKGIQTHPD+RFF Sbjct: 19 ISSAHVYLDERFDDGWENRWVISDWKKDEGAAGEWLHTAGKWNGDPDDKGIQTHPDARFF 78
Query: 278 AISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPD 457 AIS+EFPEF+NKDK LVLQFSVKHEQ LDCGGGY+KLLSGDVDQ+ FGGDTPYSIMFGPD Sbjct: 79 AISAEFPEFNNKDKTLVLQFSVKHEQKLDCGGGYVKLLSGDVDQKKFGGDTPYSIMFGPD 138
Query: 458 ICGYSTKKVHVILSY*GKNHPIENDI 535 ICGYSTKKVH IL + GKN PI+ D+ Sbjct: 139 ICGYSTKKVHAILGHGGKNLPIKKDV 164
>tr|Q9FYV2|Q9FYV2_PINTA Calreticulin OS=Pinus taeda PE=2 SV=1 Length = 427
Score = 253 bits (646), Expect = 4e-66 Identities = 114/151 (75%), Positives = 130/151 (86%) Frame = +2
Query: 86 LHYILTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPD 265 L L A VFFEE+FDD WE+RWV+SDWKK E AGDW+HT+ KW+GDP+DKGIQTH D Sbjct: 15 LFVTLVSAEVFFEERFDDSWESRWVQSDWKKDESLAGDWVHTSGKWNGDPNDKGIQTHTD 74
Query: 266 SRFFAISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIM 445 RFFAIS+ +PEFSNKDK LVLQFSVKHEQ LDCGGGY+KLLSG++DQ+NF G+TPYSIM Sbjct: 75 YRFFAISAAYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLSGEIDQKNFSGETPYSIM 134
Query: 446 FGPDICGYSTKKVHVILSY*GKNHPIENDIP 538 FGPDICGYSTKKVH ILSY GK HPI+ D+P Sbjct: 135 FGPDICGYSTKKVHTILSYKGK-HPIKKDVP 164
>tr|A9NUL6|A9NUL6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 418
Score = 252 bits (644), Expect = 8e-66 Identities = 112/144 (77%), Positives = 128/144 (88%) Frame = +2
Query: 107 AHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFFAIS 286 A V FEE+FDD W++RWV+SDWKK E AGDW+HTA KW+GDP+DKGIQTH D RFFAIS Sbjct: 24 AEVLFEERFDDSWKSRWVQSDWKKDESLAGDWVHTAGKWNGDPNDKGIQTHTDYRFFAIS 83
Query: 287 SEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPDICG 466 + FPEFSNKDK LVLQFSVKHEQ LDCGGGY+KLLSG++DQ+NF G+TPYSIMFGPDICG Sbjct: 84 AAFPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLSGEIDQKNFTGETPYSIMFGPDICG 143
Query: 467 YSTKKVHVILSY*GKNHPIENDIP 538 YSTKKVHVILS G+NHPI+ D+P Sbjct: 144 YSTKKVHVILSNKGQNHPIKKDVP 167
>tr|Q5MCL9|Q5MCL9_WHEAT Calreticulin-like protein OS=Triticum aestivum PE=2 SV=1 Length = 415
Score = 243 bits (619), Expect = 6e-63 Identities = 108/144 (75%), Positives = 124/144 (86%) Frame = +2
Query: 107 AHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFFAIS 286 A VFF+EKF+D WE+RWVKS+WKK E AG+W HT+ KWHGD +DKGIQT D RF+AIS Sbjct: 25 ADVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDKGIQTSEDYRFYAIS 84
Query: 287 SEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPDICG 466 +E+PEFSNKDK LVLQF+VKHEQ LDCGGGY+KLL GDVDQ+ FGGDTPYSIMFGPDICG Sbjct: 85 AEYPEFSNKDKTLVLQFTVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICG 144
Query: 467 YSTKKVHVILSY*GKNHPIENDIP 538 YSTKKVH IL+ GKNH I+ D+P Sbjct: 145 YSTKKVHTILTKDGKNHLIKKDVP 168
>tr|A7PRT0|A7PRT0_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022619001 PE=4 SV=1 Length = 438
Score = 243 bits (619), Expect = 6e-63 Identities = 107/147 (72%), Positives = 126/147 (85%) Frame = +2
Query: 98 LTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFF 277 + A VFFEE+FDD WEN+WVKS+WKK E AG+W +T+ KWHGDP+DKGIQT D RF+ Sbjct: 23 IASAKVFFEERFDDGWENKWVKSEWKKDENMAGEWNYTSGKWHGDPNDKGIQTSEDYRFY 82
Query: 278 AISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPD 457 AIS+E+PEFSNKDK LV QF+VKHEQ LDCGGGY+KLLSG+VDQ+ FGGDTPYSIMFGPD Sbjct: 83 AISAEYPEFSNKDKTLVFQFTVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPD 142
Query: 458 ICGYSTKKVHVILSY*GKNHPIENDIP 538 ICGY+TKKVH IL+ GKNH I+ D+P Sbjct: 143 ICGYTTKKVHAILTRDGKNHLIKKDVP 169
>tr|A0A762|A0A762_SOYBN Calreticulin-1 OS=Glycine max GN=Gm crt-1 PE=2 SV=1 Length = 420
Score = 241 bits (616), Expect = 1e-62 Identities = 108/147 (73%), Positives = 124/147 (84%) Frame = +2
Query: 98 LTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFF 277 + A+VFFEE+FDD WENRWVKSDWKK E AG+W HT+ +W+GD +DKGIQT D RF+ Sbjct: 21 IASANVFFEERFDDGWENRWVKSDWKKDENVAGEWNHTSGQWNGDANDKGIQTSEDYRFY 80
Query: 278 AISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPD 457 AIS+E+PEFSNK K LV QFSVKHEQ LDCGGGY+KLLSGDVDQ+ FGGDTPYSIMFGPD Sbjct: 81 AISAEYPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPD 140
Query: 458 ICGYSTKKVHVILSY*GKNHPIENDIP 538 ICGYSTKKVH IL+Y NH I+ D+P Sbjct: 141 ICGYSTKKVHAILTYNNTNHLIKKDVP 167
>tr|Q40041|Q40041_HORVU Calreticulin (Fragment) OS=Hordeum vulgare GN=CRH2 PE=2 SV=1 Length = 415
Score = 241 bits (615), Expect = 2e-62 Identities = 107/144 (74%), Positives = 123/144 (85%) Frame = +2
Query: 107 AHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFFAIS 286 A VFF+EKF+D WE+RWVKS+WKK E AG+W HT+ KWHGD +DKGIQT D RF+AIS Sbjct: 21 ADVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDKGIQTSEDYRFYAIS 80
Query: 287 SEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPDICG 466 +E+PEFSNKDK LVLQF+VKHEQ LDCGGGY+KLL GDVDQ+ FGGDTPY IMFGPDICG Sbjct: 81 AEYPEFSNKDKTLVLQFTVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYGIMFGPDICG 140
Query: 467 YSTKKVHVILSY*GKNHPIENDIP 538 YSTKKVH IL+ GKNH I+ D+P Sbjct: 141 YSTKKVHTILTKNGKNHLIKKDVP 164
>tr|Q40040|Q40040_HORVU Calreticulin (Fragment) OS=Hordeum vulgare GN=CRH1 PE=2 SV=1 Length = 412
Score = 241 bits (615), Expect = 2e-62 Identities = 107/144 (74%), Positives = 123/144 (85%) Frame = +2
Query: 107 AHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFFAIS 286 A VFF+EKF+D WE+RWVKS+WKK E AG+W HT+ KWHGD +DKGIQT D RF+AIS Sbjct: 18 ADVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDKGIQTSEDYRFYAIS 77
Query: 287 SEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPDICG 466 +E+PEFSNKDK LVLQF+VKHEQ LDCGGGY+KLL GDVDQ+ FGGDTPY IMFGPDICG Sbjct: 78 AEYPEFSNKDKTLVLQFTVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYGIMFGPDICG 137
Query: 467 YSTKKVHVILSY*GKNHPIENDIP 538 YSTKKVH IL+ GKNH I+ D+P Sbjct: 138 YSTKKVHTILTKNGKNHLIKKDVP 161
>tr|A5B3R5|A5B3R5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010536 PE=4 SV=1 Length = 462
Score = 240 bits (612), Expect = 4e-62 Identities = 106/147 (72%), Positives = 125/147 (85%) Frame = +2
Query: 98 LTDAHVFFEEKFDDRWENRWVKSDWKKSEGAAGDWLHTARKWHGDPDDKGIQTHPDSRFF 277 + A VFFEE+F D WEN+WVKS+WKK E AG+W +T+ KWHGDP+DKGIQT D RF+ Sbjct: 23 IASAKVFFEERFHDGWENKWVKSEWKKDENMAGEWNYTSGKWHGDPNDKGIQTSEDYRFY 82
Query: 278 AISSEFPEFSNKDKNLVLQFSVKHEQDLDCGGGYIKLLSGDVDQQNFGGDTPYSIMFGPD 457 AIS+E+PEFSNKDK LV QF+VKHEQ LDCGGGY+KLLSG+VDQ+ FGGDTPYSIMFGPD Sbjct: 83 AISAEYPEFSNKDKTLVFQFTVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPD 142
Query: 458 ICGYSTKKVHVILSY*GKNHPIENDIP 538 ICGY+TKKVH IL+ GKNH I+ D+P Sbjct: 143 ICGYTTKKVHAILTRDGKNHLIKKDVP 169
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