DK962015 |
Clone id |
TST39A01NGRL0011_L14 |
Library |
TST39 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_L14. 5' end sequence. |
Accession |
DK962015 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL287Contig1 |
Sequence |
AGGATCTTTTACAAAGAGATGGTTTGAATTTGAAAACAATAAAGTTTCGAGTCCTTGATG AGGCGGATGAGATGCTGAATATGGGTTTTGTCGACGATGTTGAGTTAATACTTGGACACG TCGAAGATGCAGCAAATGTTCAAACTCTACTGTTCAGTGCAACCATGCCAGAATGGGTCA AGAAGATTGCATCAAAGTTTCTTAAAGATGTGAAAGAAACAGTGGATTTGGTCGGTGAGG AGAAAATGAAGGCCAGTTGCAGTGTTAGGCACCTCCTCCTTCCGTGTGGCAGAGCAGCAC GAGCTCAACTCATACCAGATGTCATATCATGTTACAGTAGTGGTGGCCGCACGATTATCT TTACAGAGACGAAGAATGATGCTTCTGAGCTGGGGAGTTCTTTGCCATCTTCCCGTGTCT TGCATGGAGATATAGCACAAGCACAACGTGAGGTCACTCTTGCTGGCTTCCGATCAGGGA AGTTTCCAGTACTGGTGGCAACTGATGTAGCTGCTCGAGGTCTGGATATAAATGATGTCC AACTAATCATTCAGTGTGAGCCTTCACGAGATGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q650T9 |
Definition |
sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica |
Align length |
190 |
Score (bit) |
289.0 |
E-value |
8.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962015|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_L14, 5' (574 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Ory... 289 8e-78 sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Ara... 264 2e-70 sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spi... 263 4e-70 sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicu... 178 2e-44 sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus G... 178 2e-44 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens G... 176 1e-43 sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus mu... 172 8e-43 sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo s... 172 8e-43 sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3 OS=Ory... 168 2e-41 sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9 OS=Ara... 164 3e-40 sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Ory... 163 5e-40 sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53 OS=A... 162 8e-40 sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=O... 161 2e-39 sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3 OS=Ara... 158 2e-38 sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=A... 117 4e-26 sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=O... 117 5e-26 sp|A4RHF1|DED1_MAGGR ATP-dependent RNA helicase DED1 OS=Magnapor... 117 5e-26 sp|P09052|VASA_DROME ATP-dependent RNA helicase vasa OS=Drosophi... 116 9e-26 sp|P0C2M6|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericel... 115 1e-25 sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=O... 115 2e-25 sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosarto... 115 2e-25 sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderom... 115 2e-25 sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Aspergil... 115 2e-25 sp|Q8K9H6|DEAD_BUCAP Cold-shock DEAD box protein A homolog OS=Bu... 114 3e-25 sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago... 114 3e-25 sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Pichia s... 113 6e-25 sp|Q5KN36|DED1_CRYNE ATP-dependent RNA helicase ded1 OS=Cryptoco... 113 6e-25 sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergil... 113 6e-25 sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergil... 113 6e-25 sp|Q61496|DDX4_MOUSE Probable ATP-dependent RNA helicase DDX4 OS... 113 8e-25
>sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1 Length = 696
Score = 289 bits (739), Expect = 8e-78 Identities = 144/190 (75%), Positives = 163/190 (85%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D +++ LN +++KFRVLDEADEMLNMGFVDDVELILG VED VQTLLFSAT+PEWVK Sbjct: 256 DFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVK 315
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ +FLK K+TVDLVG+EK+KAS SVRHL LPC RAARAQ+IPD+I CYS GGRTIIF Sbjct: 316 KLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIF 375
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK AS+L + SR LHGD+AQAQREV LAGFRSGKF VLVAT+VAARGLDINDVQ Sbjct: 376 TETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQ 435
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 436 LIIQCEPPRD 445
>sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=2 SV=2 Length = 671
Score = 264 bits (675), Expect = 2e-70 Identities = 131/190 (68%), Positives = 157/190 (82%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D ++R L+ ++FRVLDEADEML MGFV+DVELILG VED+ VQTLLFSAT+P WVK Sbjct: 237 DHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVK 296
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 I+++FLK ++T+DLVG +KMKAS SVRH+ +PC +AA A+LIPD+ISCYSSGG+TIIF Sbjct: 297 NISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQTIIF 356
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 ETK SEL L SR LHG+I Q+QREVTLAGFR+GKF LVAT+VAARGLDINDVQ Sbjct: 357 AETKVQVSELSGLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQ 416
Query: 543 LIIQCEPSRD 572 LIIQCEP R+ Sbjct: 417 LIIQCEPPRE 426
>sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7 PE=2 SV=1 Length = 685
Score = 263 bits (673), Expect = 4e-70 Identities = 131/190 (68%), Positives = 155/190 (81%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 DLL++ L L ++ FRVLDEADEML MGFVDDVELILG V+ + VQTLLFSAT+P WVK Sbjct: 248 DLLEKGVLKLGSLLFRVLDEADEMLKMGFVDDVELILGKVDHVSKVQTLLFSATLPSWVK 307
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 +I+++FLK K+TVDLV ++KMKAS SVRH+++PC +AR LIPD+I CY SGGR+IIF Sbjct: 308 QISTRFLKSAKKTVDLVSDQKMKASISVRHIVIPCSASARPDLIPDIIRCYGSGGRSIIF 367
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK AS+L L +R LHGDI Q QREVTL GFR+GKF LVAT+VAARGLDINDVQ Sbjct: 368 TETKESASQLAGLLTGARPLHGDIQQTQREVTLKGFRTGKFMTLVATNVAARGLDINDVQ 427
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 428 LIIQCEPPRD 437
>sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus GN=Ddx21 PE=2 SV=1 Length = 782
Score = 178 bits (451), Expect = 2e-44 Identities = 103/197 (52%), Positives = 130/197 (65%), Gaps = 7/197 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELIL--GHVEDAA-NVQTLLFSATMPE 173 D LQ L+L +K VLDE D+ML+MGF D VE IL + +D+ N QTLLFSAT P Sbjct: 317 DHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPH 376
Query: 174 WVKKIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSS-GGR 350 WV +A K++K E VDL+G++ KA+ +V HL + C RA +I DVI YS GR Sbjct: 377 WVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGR 436
Query: 351 TIIFTETKNDASELGSSL---PSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARG 521 TIIF ETK DA EL + ++ LHGDI Q QRE+TL GFR+G F VLVAT+VAARG Sbjct: 437 TIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARG 496
Query: 522 LDINDVQLIIQCEPSRD 572 LDI +V L++Q P +D Sbjct: 497 LDIPEVDLVVQSCPPKD 513
>sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus GN=Ddx21 PE=1 SV=2 Length = 851
Score = 178 bits (451), Expect = 2e-44 Identities = 103/197 (52%), Positives = 130/197 (65%), Gaps = 7/197 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELIL--GHVEDAA-NVQTLLFSATMPE 173 D LQ L+L +K VLDE D+ML+MGF D VE IL + +D+ N QTLLFSAT P Sbjct: 393 DHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSATCPH 452
Query: 174 WVKKIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSS-GGR 350 WV +A K++K E VDL+G++ KA+ +V HL + C RA +I DVI YS GR Sbjct: 453 WVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGDVIRVYSGHQGR 512
Query: 351 TIIFTETKNDASELGSSL---PSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARG 521 TIIF ETK DA EL + ++ LHGDI Q QRE+TL GFR+G F VLVAT+VAARG Sbjct: 513 TIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARG 572
Query: 522 LDINDVQLIIQCEPSRD 572 LDI +V L++Q P +D Sbjct: 573 LDIPEVDLVVQSCPPKD 589
>sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5 Length = 783
Score = 176 bits (445), Expect = 1e-43 Identities = 100/197 (50%), Positives = 126/197 (63%), Gaps = 7/197 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHV---EDAANVQTLLFSATMPE 173 D +Q L+L +K VLDE D+ML+MGF D VE IL + N QTLLFSAT P Sbjct: 321 DHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPH 380
Query: 174 WVKKIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSG-GR 350 WV +A K++K E VDL+G++ K + +V HL + C RA +I DVI YS GR Sbjct: 381 WVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGR 440
Query: 351 TIIFTETKNDASELGSSLP---SSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARG 521 TIIF ETK +A EL + ++ LHGDI Q QRE+TL GFR+G F VLVAT+VAARG Sbjct: 441 TIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARG 500
Query: 522 LDINDVQLIIQCEPSRD 572 LDI +V L+IQ P +D Sbjct: 501 LDIPEVDLVIQSSPPKD 517
>sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus musculus GN=Ddx50 PE=2 SV=1 Length = 734
Score = 172 bits (437), Expect = 8e-43 Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 7/197 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGH---VEDAANVQTLLFSATMPE 173 D LQ L+L ++ VLDE D+ML++GF + VE I+ + N QTLLFSAT P+ Sbjct: 269 DHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQ 328
Query: 174 WVKKIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYS-SGGR 350 WV K+A K++K E VDLVG+ KA+ +V HL + C + R +I DV+ YS S GR Sbjct: 329 WVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGR 388
Query: 351 TIIFTETKNDASELGSS---LPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARG 521 IIF ETK + +E+ + +++ LHGDIAQ+QRE+TL GFR G F VLVAT+VAARG Sbjct: 389 AIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARG 448
Query: 522 LDINDVQLIIQCEPSRD 572 LDI +V L+IQ P +D Sbjct: 449 LDIPEVDLVIQSSPPQD 465
>sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sapiens GN=DDX50 PE=1 SV=1 Length = 737
Score = 172 bits (437), Expect = 8e-43 Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 7/197 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGH---VEDAANVQTLLFSATMPE 173 D LQ L+L ++ VLDE D+ML++GF + VE I+ + N QTLLFSAT P+ Sbjct: 272 DHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQ 331
Query: 174 WVKKIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYS-SGGR 350 WV K+A K++K E VDLVG+ KA+ +V HL + C + R +I DV+ YS S GR Sbjct: 332 WVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGR 391
Query: 351 TIIFTETKNDASELGSS---LPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARG 521 IIF ETK + +E+ + +++ LHGDIAQ+QRE+TL GFR G F VLVAT+VAARG Sbjct: 392 AIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARG 451
Query: 522 LDINDVQLIIQCEPSRD 572 LDI +V L+IQ P +D Sbjct: 452 LDIPEVDLVIQSSPPQD 468
>sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3 OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2 Length = 758
Score = 168 bits (426), Expect = 2e-41 Identities = 94/193 (48%), Positives = 130/193 (67%), Gaps = 3/193 (1%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 DL+ L L +K+ VLDEAD+ML +GF +DVE IL + A Q++LFSATMP WVK Sbjct: 241 DLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLP--AERQSMLFSATMPGWVK 298
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ ++L + T+DLVG++ K + ++ +P ++ ++ D+I+ Y+ GG+TI+F Sbjct: 299 KLSRRYLNNPL-TIDLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVF 357
Query: 363 TETKNDASELGSSLPSS---RVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDIN 533 T+TK DA E+ +L +S LHGDI+Q QRE TL GFR GKF VLVATDVAARGLDI Sbjct: 358 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 417
Query: 534 DVQLIIQCEPSRD 572 +V LII E D Sbjct: 418 NVDLIIHYELPND 430
>sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1 Length = 610
Score = 164 bits (415), Expect = 3e-40 Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 3/189 (1%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 DL++R LNL ++F VLDEAD+ML +GF +DVE+IL + A Q+++FSATMP W++ Sbjct: 251 DLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLP--AKRQSMMFSATMPSWIR 308
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 + K+L + T+DLVG+ K + + + RA +I ++ + GG+ I+F Sbjct: 309 SLTKKYLNNPL-TIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVF 367
Query: 363 TETKNDASELGSSLPSS---RVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDIN 533 T+TK DA L L S LHGDI+QAQRE TLAGFR G F +LVATDVAARGLD+ Sbjct: 368 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 427
Query: 534 DVQLIIQCE 560 +V L+I E Sbjct: 428 NVDLVIHYE 436
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3C0Q9 |
Definition |
tr|A3C0Q9|A3C0Q9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica |
Align length |
190 |
Score (bit) |
289.0 |
E-value |
9.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962015|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_L14, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3C0Q9|A3C0Q9_ORYSJ Putative uncharacterized protein OS=Oryza... 289 9e-77 tr|A2Z376|A2Z376_ORYSI Putative uncharacterized protein OS=Oryza... 289 9e-77 tr|A6MCY9|A6MCY9_9ORYZ DEAD/DEAH box helicase family protein OS=... 288 1e-76 tr|B4FF50|B4FF50_MAIZE Putative uncharacterized protein OS=Zea m... 286 4e-76 tr|A9SDC8|A9SDC8_PHYPA Predicted protein OS=Physcomitrella paten... 273 6e-72 tr|A9S0Z8|A9S0Z8_PHYPA Predicted protein OS=Physcomitrella paten... 269 9e-71 tr|Q9M6R6|Q9M6R6_PHAAU RNA helicase OS=Phaseolus aureus GN=VRH1 ... 267 4e-70 tr|A7QGV9|A7QGV9_VITVI Chromosome chr16 scaffold_94, whole genom... 265 2e-69 tr|A4RW46|A4RW46_OSTLU Predicted protein OS=Ostreococcus lucimar... 213 5e-54 tr|Q01AV7|Q01AV7_OSTTA Putative RNA helicase (ISS) OS=Ostreococc... 207 3e-52 tr|A8JGT1|A8JGT1_CHLRE RNA helicase OS=Chlamydomonas reinhardtii... 200 5e-50 tr|B5RIC3|B5RIC3_SALSA DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 187 5e-46 tr|B3RVR9|B3RVR9_TRIAD Putative uncharacterized protein OS=Trich... 181 3e-44 tr|Q9CWZ5|Q9CWZ5_MOUSE Putative uncharacterized protein OS=Mus m... 178 2e-43 tr|Q8K2L4|Q8K2L4_MOUSE Ddx21 protein (Fragment) OS=Mus musculus ... 178 2e-43 tr|Q6PCP0|Q6PCP0_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 178 2e-43 tr|Q3ULC7|Q3ULC7_MOUSE Putative uncharacterized protein OS=Mus m... 178 2e-43 tr|Q3TVJ3|Q3TVJ3_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 178 2e-43 tr|Q4S0Z1|Q4S0Z1_TETNG Chromosome 5 SCAF14773, whole genome shot... 177 4e-43 tr|A4FV23|A4FV23_BOVIN DDX21 protein OS=Bos taurus GN=DDX21 PE=2... 176 8e-43 tr|B2RDL0|B2RDL0_HUMAN cDNA, FLJ96663, Homo sapiens DEAD (Asp-Gl... 176 1e-42 tr|B1H1J4|B1H1J4_DANRE Ddx21 protein OS=Danio rerio GN=ddx21 PE=... 174 4e-42 tr|Q8BRU5|Q8BRU5_MOUSE Putative uncharacterized protein OS=Mus m... 172 9e-42 tr|Q5BKP5|Q5BKP5_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 50... 172 9e-42 tr|Q019E9|Q019E9_OSTTA ATP-dependent RNA helicase (ISS) OS=Ostre... 172 9e-42 tr|Q5VX37|Q5VX37_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 50... 172 9e-42 tr|B4DW97|B4DW97_HUMAN cDNA FLJ61430, highly similar to ATP-depe... 172 9e-42 tr|B4DED6|B4DED6_HUMAN cDNA FLJ56545, highly similar to ATP-depe... 172 9e-42 tr|B6PJ14|B6PJ14_BRAFL Putative uncharacterized protein (Fragmen... 171 3e-41 tr|B6LMY8|B6LMY8_BRAFL Putative uncharacterized protein (Fragmen... 171 3e-41
>tr|A3C0Q9|A3C0Q9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028881 PE=3 SV=1 Length = 685
Score = 289 bits (739), Expect = 9e-77 Identities = 144/190 (75%), Positives = 163/190 (85%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D +++ LN +++KFRVLDEADEMLNMGFVDDVELILG VED VQTLLFSAT+PEWVK Sbjct: 245 DFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVK 304
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ +FLK K+TVDLVG+EK+KAS SVRHL LPC RAARAQ+IPD+I CYS GGRTIIF Sbjct: 305 KLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIF 364
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK AS+L + SR LHGD+AQAQREV LAGFRSGKF VLVAT+VAARGLDINDVQ Sbjct: 365 TETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQ 424
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 425 LIIQCEPPRD 434
>tr|A2Z376|A2Z376_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32075 PE=3 SV=1 Length = 685
Score = 289 bits (739), Expect = 9e-77 Identities = 144/190 (75%), Positives = 163/190 (85%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D +++ LN +++KFRVLDEADEMLNMGFVDDVELILG VED VQTLLFSAT+PEWVK Sbjct: 245 DFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVK 304
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ +FLK K+TVDLVG+EK+KAS SVRHL LPC RAARAQ+IPD+I CYS GGRTIIF Sbjct: 305 KLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIF 364
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK AS+L + SR LHGD+AQAQREV LAGFRSGKF VLVAT+VAARGLDINDVQ Sbjct: 365 TETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQ 424
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 425 LIIQCEPPRD 434
>tr|A6MCY9|A6MCY9_9ORYZ DEAD/DEAH box helicase family protein OS=Oryza brachyantha PE=3 SV=1 Length = 688
Score = 288 bits (738), Expect = 1e-76 Identities = 145/190 (76%), Positives = 162/190 (85%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D +Q+ LN K++KFRVLDEADEMLNMGFVDDVELILG VED VQTLLFSAT+P+WV Sbjct: 246 DFVQKGTLNFKSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATLPDWVG 305
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ +FLK K+TVDLVG+EK+KAS SVRHL LPC RAARAQ+IPD+I CYS GGRTIIF Sbjct: 306 KLSLRFLKPGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIF 365
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK ASEL + SR LHGD+AQAQREV LAGFRSGKF VLVAT+VAARGLDINDVQ Sbjct: 366 TETKESASELSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQ 425
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 426 LIIQCEPPRD 435
>tr|B4FF50|B4FF50_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 506
Score = 286 bits (733), Expect = 4e-76 Identities = 144/190 (75%), Positives = 162/190 (85%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D + + LNLK +KFRVLDEADEMLNMGFVDDVELILG VEDA VQTLLFSAT+PEWV Sbjct: 262 DFIVKGTLNLKCLKFRVLDEADEMLNMGFVDDVELILGKVEDATKVQTLLFSATLPEWVN 321
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 K++ +FLK ++TVDLVG EK+KAS SV+HL LPC +AARAQ+IPD+I CYS GGRTIIF Sbjct: 322 KLSMRFLKVDRKTVDLVGNEKLKASASVKHLALPCNKAARAQVIPDIIRCYSHGGRTIIF 381
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK+ ASEL + SR LHGD+AQAQREV LAGFRSGKF VLVAT+VAARGLDINDVQ Sbjct: 382 TETKDSASELSGLIHGSRALHGDVAQAQREVILAGFRSGKFQVLVATNVAARGLDINDVQ 441
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 442 LIIQCEPPRD 451
>tr|A9SDC8|A9SDC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127777 PE=3 SV=1 Length = 689
Score = 273 bits (697), Expect = 6e-72 Identities = 141/192 (73%), Positives = 160/192 (83%), Gaps = 2/192 (1%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D +R LNLK++KFR+LDEADEMLNMGFVDDVE ILG V+D + VQTLLFSAT+P WV+ Sbjct: 249 DHFERGTLNLKSLKFRILDEADEMLNMGFVDDVETILGGVDDPSKVQTLLFSATLPTWVQ 308
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 +IA KFLK ++TVDLVG+EKMKAS SVRHLLLP + R QL+ DVISCY SGGR I+F Sbjct: 309 QIARKFLKATRKTVDLVGDEKMKASNSVRHLLLPGHYSMRTQLVQDVISCYGSGGRIIVF 368
Query: 363 TETKNDASELGSSLPS--SRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDIND 536 TETKNDASEL +L S +R LHGDI Q QREVTL GFR+GKF VLVATDVAARGLDIND Sbjct: 369 TETKNDASELAGALKSGTARALHGDIPQNQREVTLQGFRTGKFSVLVATDVAARGLDIND 428
Query: 537 VQLIIQCEPSRD 572 VQL+IQCEP RD Sbjct: 429 VQLVIQCEPPRD 440
>tr|A9S0Z8|A9S0Z8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162207 PE=3 SV=1 Length = 657
Score = 269 bits (687), Expect = 9e-71 Identities = 139/192 (72%), Positives = 158/192 (82%), Gaps = 2/192 (1%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D L+R GLNLK++KFR+LDEADEMLNMGFVDDVE ILG V+D + VQTLLFSAT+P WV+ Sbjct: 220 DHLERGGLNLKSLKFRILDEADEMLNMGFVDDVEKILGGVDDPSKVQTLLFSATLPTWVQ 279
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 +IA KFLK + TVDLVG+EKMKAS +V+HLLLP + R QL+ DVI CY SGGR I+F Sbjct: 280 QIARKFLKPERRTVDLVGDEKMKASNNVKHLLLPGHYSMRTQLVQDVIQCYGSGGRIIVF 339
Query: 363 TETKNDASELGSSLPS--SRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDIND 536 TETKNDASEL L S +R LHGDI Q QREVTL GFR+ KF VLVATDVAARGLDIND Sbjct: 340 TETKNDASELAGVLKSGTARALHGDIPQNQREVTLQGFRTSKFSVLVATDVAARGLDIND 399
Query: 537 VQLIIQCEPSRD 572 VQL+IQCEP RD Sbjct: 400 VQLVIQCEPPRD 411
>tr|Q9M6R6|Q9M6R6_PHAAU RNA helicase OS=Phaseolus aureus GN=VRH1 PE=2 SV=1 Length = 713
Score = 267 bits (682), Expect = 4e-70 Identities = 135/190 (71%), Positives = 156/190 (82%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D ++R ++L +KFRVLDEADEML MGFV+DVELILG VE+ VQTLLFSAT+P+WVK Sbjct: 270 DHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVENVNKVQTLLFSATLPDWVK 329
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 IA++FLK K+T DLVG KMKAS +VRH++LPC AR+QLIPD+I CYSSGGRTIIF Sbjct: 330 HIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAPARSQLIPDIIRCYSSGGRTIIF 389
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK AS+L LP +R LHGDI QAQREVTL GFRSGKF LVAT+VAARGLDINDVQ Sbjct: 390 TETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRSGKFMTLVATNVAARGLDINDVQ 449
Query: 543 LIIQCEPSRD 572 LIIQCE R+ Sbjct: 450 LIIQCEFPRE 459
>tr|A7QGV9|A7QGV9_VITVI Chromosome chr16 scaffold_94, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038510001 PE=3 SV=1 Length = 600
Score = 265 bits (676), Expect = 2e-69 Identities = 134/190 (70%), Positives = 157/190 (82%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D ++R ++ ++KFRVLDEADEML MGFV+DVELILG VQTLLFSAT+P WVK Sbjct: 154 DHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILG-----IKVQTLLFSATLPGWVK 208
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVISCYSSGGRTIIF 362 +I+S+FLK +T DLVG EKMKAS +VRH++LPC +AR+Q+IPDVI CYSSGGRTIIF Sbjct: 209 EISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQVIPDVIRCYSSGGRTIIF 268
Query: 363 TETKNDASELGSSLPSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGLDINDVQ 542 TETK+ ASEL LP +R LHGDI Q+QREVTL+GFRSGKF LVAT+VAARGLDINDVQ Sbjct: 269 TETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDINDVQ 328
Query: 543 LIIQCEPSRD 572 LIIQCEP RD Sbjct: 329 LIIQCEPPRD 338
>tr|A4RW46|A4RW46_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_15057 PE=3 SV=1 Length = 654
Score = 213 bits (543), Expect = 5e-54 Identities = 117/196 (59%), Positives = 142/196 (72%), Gaps = 6/196 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D L+R L + +KFRVLDEADEMLNMGFVDDVELIL + + +VQTLLFSAT+P WVK Sbjct: 225 DHLERKTLMMDKLKFRVLDEADEMLNMGFVDDVELIL---KSSGDVQTLLFSATLPPWVK 281
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVI-SCYSSGGRTII 359 IA +FLK TVDLVG++K KAS +V+H+LLPC + R L+ DVI S GGR I+ Sbjct: 282 DIAKRFLKPDYATVDLVGDQKQKASGAVQHMLLPCQWSDRVDLVCDVIRSKAPGGGRVIV 341
Query: 360 FTETKNDASELGSSL-----PSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGL 524 F +TK D EL +L ++ LHGD++Q QREV LAGFR KF VLVATDVAARGL Sbjct: 342 FCDTKRDCGELCDNLQKEIPKGAKALHGDVSQGQREVVLAGFREDKFQVLVATDVAARGL 401
Query: 525 DINDVQLIIQCEPSRD 572 DI V+L+IQCEP +D Sbjct: 402 DITGVELVIQCEPPKD 417
>tr|Q01AV7|Q01AV7_OSTTA Putative RNA helicase (ISS) OS=Ostreococcus tauri GN=Ot04g02930 PE=3 SV=1 Length = 693
Score = 207 bits (528), Expect = 3e-52 Identities = 114/196 (58%), Positives = 141/196 (71%), Gaps = 6/196 (3%) Frame = +3
Query: 3 DLLQRDGLNLKTIKFRVLDEADEMLNMGFVDDVELILGHVEDAANVQTLLFSATMPEWVK 182 D L+R L + +KFRVLDEADEMLNMGFVDDVE IL + + +VQTLLFSAT+P WVK Sbjct: 223 DHLERKTLMMTDLKFRVLDEADEMLNMGFVDDVETIL---KSSGDVQTLLFSATLPSWVK 279
Query: 183 KIASKFLKDVKETVDLVGEEKMKASCSVRHLLLPCGRAARAQLIPDVI-SCYSSGGRTII 359 I+ +FLK TVDLVG+EK KAS +V+H+LLPC + R L+ DVI S GGR I+ Sbjct: 280 DISKRFLKPNYSTVDLVGDEKQKASGAVQHMLLPCQWSDRVDLVCDVIRSKAPGGGRVIV 339
Query: 360 FTETKNDASELGSSL-----PSSRVLHGDIAQAQREVTLAGFRSGKFPVLVATDVAARGL 524 F +TK D EL +L ++ LHGD++Q+QREV L+ FR KF VLVATDVAARGL Sbjct: 340 FCDTKRDCGELCDNLQKEIPKGAKALHGDVSQSQREVVLSLFREDKFQVLVATDVAARGL 399
Query: 525 DINDVQLIIQCEPSRD 572 DI V+L+IQCEP +D Sbjct: 400 DITGVELVIQCEPPKD 415
|