DK962026 |
Clone id |
TST39A01NGRL0011_M02 |
Library |
TST39 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_M02. 5' end sequence. |
Accession |
DK962026 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL140Contig1 |
Sequence |
CTCTGCTCTAAGTGCTACAGAGAACTCACCTTGAAGAAGCAAGGGAGCCCCTCTGAGTTA TCTATAATCACCTCTGCGTCCGCCACAACTCCGGTGCATCTCTCTCCTGTCGGATCTGAG AAGTCCTGTGCAAAATCTCCCTTTTCACTCTCATTGCCTGCATCTGTCGAACCCCTTAAG GCTCAAATAGCTCTTCCGTCTTCGGTAATGGGTGAGATTTCACCGATTTCTACTGGCTTG GTGGAGTCAGTGAGCCCTTCGAGCTCGCGGTCACATGCTACTGCTAAGCGCCCTTCCACT ACAGATCTGGCACCTATTGCAGCTTTGCTCTTACCAGACTCTTTGCTTAGCAAAGATTTG CTACCTGCTGCGCGGAGGCAAAACACCAACAGATGTCTCACTTGCAAGAAGAGAATGGGG CTATTGGGTTTTAAGTGTCGTTGTGGGAACATCTTTTGTGCGTCGCATCGATACTCTGAC AAGCATGGGTGCCCTTTTGATTACAAATCAGCAGGCAGAGAAGCCATAGCCAAGGCAAAC CCAGTTGTGAAAGCACAGAAGGTAGAGAGGATTTGATTCAAATTGTATTGTCTTTATATG TAGCTCAATGTGGAGGACAAGTAGATAGGCTTATGGTGGTGGGTATTGTGGTTTAATATG GAATGGTGGGAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3BDI8 |
Definition |
sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica |
Align length |
66 |
Score (bit) |
110.0 |
E-value |
9.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P8S9 |
Definition |
tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
66 |
Score (bit) |
117.0 |
E-value |
7.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962026|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_M02, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Popul... 117 7e-25 tr|A9P9C0|A9P9C0_POPTR Putative uncharacterized protein OS=Popul... 114 6e-24 tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-... 114 7e-24 tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella paten... 112 3e-23 tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert seque... 110 1e-22 tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea... 110 1e-22 tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromos... 110 1e-22 tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea... 108 2e-22 tr|A5C670|A5C670_VITVI Putative uncharacterized protein OS=Vitis... 108 2e-22 tr|Q0GEA0|Q0GEA0_CAMSI Zinc finger protein OS=Camellia sinensis ... 108 3e-22 tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Popul... 108 3e-22 tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Popul... 108 3e-22 tr|B7FGP6|B7FGP6_MEDTR Putative uncharacterized protein OS=Medic... 108 4e-22 tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea... 108 4e-22 tr|A9NYV7|A9NYV7_PICSI Putative uncharacterized protein OS=Picea... 108 4e-22 tr|A9NK82|A9NK82_PICSI Putative uncharacterized protein OS=Picea... 108 4e-22 tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome... 108 4e-22 tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert seque... 108 4e-22 tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza... 108 4e-22 tr|A9RR11|A9RR11_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 9e-22 tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea m... 107 9e-22 tr|A5C6A7|A5C6A7_VITVI Putative uncharacterized protein (Chromos... 105 3e-21 tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea ... 104 4e-21 tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containin... 104 4e-21 tr|B7FMK7|B7FMK7_MEDTR Putative uncharacterized protein OS=Medic... 104 4e-21 tr|B4FDQ8|B4FDQ8_MAIZE Putative uncharacterized protein OS=Zea m... 104 4e-21 tr|A6N083|A6N083_ORYSI Zinc finger a20 and an1 domains-containin... 104 4e-21 tr|A2Q3D5|A2Q3D5_MEDTR Zinc finger, AN1-type; Zinc finger, A20-t... 104 4e-21
>tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 172
Score = 117 bits (293), Expect = 7e-25 Identities = 49/66 (74%), Positives = 60/66 (90%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 ++ NRC +CKKR+GL GFKCRCG++FCASHRYSDKH CPFDY+SA REAIAKANPVVKA Sbjct: 107 KEGPNRCTSCKKRVGLTGFKCRCGSLFCASHRYSDKHDCPFDYRSAAREAIAKANPVVKA 166
Query: 556 QKVERI 573 +K+++I Sbjct: 167 EKLDKI 172
>tr|A9P9C0|A9P9C0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 172
Score = 114 bits (285), Expect = 6e-24 Identities = 47/66 (71%), Positives = 60/66 (90%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 ++ +RC +CKKR+GL GFKCRCG++FCASHRYSDKH CPFDY++A REAIAKANPVVKA Sbjct: 107 KEGPSRCTSCKKRVGLTGFKCRCGDLFCASHRYSDKHDCPFDYRTAAREAIAKANPVVKA 166
Query: 556 QKVERI 573 +K+++I Sbjct: 167 EKLDKI 172
>tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-finger protein OS=Citrus hybrid cultivar PE=2 SV=1 Length = 171
Score = 114 bits (284), Expect = 7e-24 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 ++ RC TC KR+GL GF CRCGN+FCA HRYSDKHGCPFDY++A REAIAKANPVVKA Sbjct: 106 KEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKA 165
Query: 556 QKVERI 573 +K+++I Sbjct: 166 EKLDKI 171
>tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170606 PE=4 SV=1 Length = 172
Score = 112 bits (280), Expect = 2e-23 Identities = 67/191 (35%), Positives = 91/191 (47%) Frame = +1
Query: 1 LCSKCYRELTLKKQGSPSELSIITSASATTPVHLSPVGSEKSCAKSPFSLSLPASVEPLK 180 +CSKCYR+ L S S S A A+ PV+ + EP+ Sbjct: 39 MCSKCYRDFVL----SQSRTSSAKIAGASPPVY--------------------ETQEPVA 74
Query: 181 AQIALPSSVMGEISPISTGLVEXXXXXXXXXHATAKRPSTTXXXXXXXXXXXXXXXXXXX 360 + + +S + P + G A+ + PS Sbjct: 75 DRAQIQNSCLSSTQPEAAGASSGAS-------ASGQDPS--------------------- 106
Query: 361 XXXXRRQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKAN 540 R NRC +CKKR+GL GF+CRCGN+FC++HRYSDKH C FDYK AGR++I+KAN Sbjct: 107 -----RSRPNRCFSCKKRLGLTGFECRCGNLFCSAHRYSDKHSCTFDYKLAGRDSISKAN 161
Query: 541 PVVKAQKVERI 573 PVVKA K+ +I Sbjct: 162 PVVKADKINKI 172
>tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124611 PE=4 SV=1 Length = 162
Score = 112 bits (280), Expect = 2e-23 Identities = 48/66 (72%), Positives = 56/66 (84%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 R +RC +CKKR+GL GFKCRCGN FC+ HRYSDKH C FDYK+AGR+AIAKANPVVKA Sbjct: 97 RPQAHRCFSCKKRVGLTGFKCRCGNTFCSLHRYSDKHSCTFDYKTAGRDAIAKANPVVKA 156
Query: 556 QKVERI 573 KV++I Sbjct: 157 DKVDKI 162
>tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105045 PE=4 SV=1 Length = 172
Score = 112 bits (279), Expect = 3e-23 Identities = 46/66 (69%), Positives = 57/66 (86%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 R NRC +CKKR+GL GF+CRCGN+FC++HRYSDKH C FDYK+AGR+AI+KANPVVKA Sbjct: 107 RPKANRCFSCKKRVGLTGFECRCGNLFCSAHRYSDKHSCTFDYKTAGRDAISKANPVVKA 166
Query: 556 QKVERI 573 K+ +I Sbjct: 167 DKMNKI 172
>tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 171
Score = 110 bits (274), Expect = 1e-22 Identities = 45/66 (68%), Positives = 57/66 (86%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 R+ NRC TC+KR+GL GF CRCGN++CA HRYSDKH C FDY++A R+AIAKANPVVKA Sbjct: 106 REGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKA 165
Query: 556 QKVERI 573 +K+++I Sbjct: 166 EKLDKI 171
>tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 110 bits (274), Expect = 1e-22 Identities = 65/191 (34%), Positives = 92/191 (48%) Frame = +1
Query: 1 LCSKCYRELTLKKQGSPSELSIITSASATTPVHLSPVGSEKSCAKSPFSLSLPASVEPLK 180 LCSKCYR+L +K+ + S ++ + EKS F+ P PL Sbjct: 39 LCSKCYRDLIMKEAQATSAMAAV----------------EKS-----FAAGSPMDEVPLS 77
Query: 181 AQIALPSSVMGEISPISTGLVEXXXXXXXXXHATAKRPSTTXXXXXXXXXXXXXXXXXXX 360 + A+ +IS G+ ++ + P+ T Sbjct: 78 SPDAIVQQNRVQISAAVAGVSSVQLADSGSSSSSPQPPAETP------------------ 119
Query: 361 XXXXRRQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKAN 540 NRC +C+KR+GL GFKCRC N FC HRY++KH C FD+K+AGREAIAKAN Sbjct: 120 ---------NRCFSCRKRVGLTGFKCRCENTFCGLHRYAEKHSCSFDFKAAGREAIAKAN 170
Query: 541 PVVKAQKVERI 573 PVVKA K++++ Sbjct: 171 PVVKAAKIDKL 181
>tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromosome chr8 scaffold_34, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00025538001 PE=4 SV=1 Length = 172
Score = 110 bits (274), Expect = 1e-22 Identities = 44/66 (66%), Positives = 57/66 (86%) Frame = +1
Query: 376 RQNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKA 555 ++ NRC C+KR+GL GF C+CGN+FCA HRYSDKH CPFDY++A R+AIAKANPVVKA Sbjct: 107 KEGPNRCTACRKRVGLTGFNCKCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKA 166
Query: 556 QKVERI 573 +K+++I Sbjct: 167 EKLDKI 172
>tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 108 bits (271), Expect = 2e-22 Identities = 45/64 (70%), Positives = 56/64 (87%) Frame = +1
Query: 379 QNTNRCLTCKKRMGLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQ 558 + TNRC +C+KR+GL GF+CRCG++FCA HRYSDKH C +DYK+AGREAIAKANP+VKA Sbjct: 116 RQTNRCFSCRKRVGLTGFRCRCGDMFCALHRYSDKHNCTYDYKTAGREAIAKANPLVKAD 175
Query: 559 KVER 570 K+ R Sbjct: 176 KILR 179
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