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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962038
Clone id TST39A01NGRL0011_M15
Library
Length 593
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_M15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCCCCTTCTCTCCTGCTTGTTAGTGTCTACCTTGTTTGTCTGTGTTTGCCGTAGCTCA
GCTGCAGCTTTCGATGCTTCCACAGTGAAGACCTCTCACTCCTTCGACTCCTACGACTTG
TTCATGGAGCTTTCGCCCGTTGCCGAGCAGAAAACTGTGAGCACCCGCAAGCAAGCTGCC
GGATCCTCCTCCAAGGACAGCACCCCCCACATGAAGGTCGGCAAGGAATATGCCTTGTGC
AAGGCCACCTCATCCTCCTGCCTCGGGAATCAACTCTCTTGCTCCACCTCTTGCTTGGAC
GGTTTCTATGGTGGAGGCTATGGACCCGGATATGGCTATGGAGGTGGCTATGGGCGGGGC
TACGGAGGCTTTTTTTTTCCTGCCCATGGCTATGGTCCTGGCTATGGCTATAGAAGTGGT
GGTGGAGGTGGCGGCGGTGGAGGTGGTAGTTTTGGGGGTGGAGGTGGTGGCGGTGGCGGT
GGTGGTGGTGGCGGTGGTGGTGGTGGAGGTGGTTGGCGTAGTGCATGCAAATATGATTGC
CTCTCCTCATGCAAGGCCACTTGCAACAACTAGAGTGAGGTCAATTGTGTCTC
■■Homology search results ■■ -
sp_hit_id Q8TB68
Definition sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens
Align length 67
Score (bit) 32.3
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_M15, 5'
         (593 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=P...    32   1.8  
sp|Q9EPX2|PPN_MOUSE Papilin OS=Mus musculus GN=Papln PE=2 SV=1         30   7.0  
sp|Q01522|CF23_DROME Chorion transcription factor Cf2, isoform I...    30   9.1  

>sp|Q8TB68|PRR7_HUMAN Proline-rich protein 7 OS=Homo sapiens GN=PRR7
           PE=2 SV=1
          Length = 274

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 18/67 (26%), Positives = 24/67 (35%)
 Frame = -2

Query: 376 KKSLRSPAHSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCC 197
           +  L +PAH+H H H+ VH L H                  +  P   H+   P      
Sbjct: 81  RSRLEAPAHAHSHPHVHVHPLLHHGPAQPHAHAHPHPHHHALPHPPPTHLSVPPR----- 135

Query: 196 PWRRIRQ 176
           PW   RQ
Sbjct: 136 PWSYPRQ 142


>sp|Q9EPX2|PPN_MOUSE Papilin OS=Mus musculus GN=Papln PE=2 SV=1
          Length = 1280

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -2

Query: 322 HSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGG 203
           H   H+ RP+ R S       +  RW      PC  SCGG
Sbjct: 342 HMCQHQPRPTHRRSCNTQPCPKTKRWKVGPWTPCSVSCGG 381


>sp|Q01522|CF23_DROME Chorion transcription factor Cf2, isoform III
           OS=Drosophila melanogaster GN=Cf2 PE=2 SV=2
          Length = 514

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
 Frame = -2

Query: 379 EKKSLRSPAHSHLHSHIRVH------SLHHRNRPSKRWSKRVDSRGRRMRW-PCTRHIPC 221
           +++ L   AH+  H    VH      +LH   RP     +   + G+  RW P TR  P 
Sbjct: 407 QREGLSDQAHTDAHRREAVHLSVLRQALHAAQRPHCAHDQAASALGKAGRWPPVTRSCPS 466

Query: 220 RPS 212
           R S
Sbjct: 467 RSS 469
tr_hit_id Q3U9R3
Definition tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 58
Score (bit) 38.1
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_M15, 5'
         (593 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.38 
tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus m...    38   0.38 
tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein OS=Magna...    38   0.38 
tr|Q3SNP1|Q3SNP1_NITWN Integrase, catalytic region OS=Nitrobacte...    36   1.4  
tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein OS=Lepto...    35   2.5  
tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08...    35   2.5  
tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subs...    35   2.5  
tr|Q5GYP9|Q5GYP9_XANOR Regucalcin OS=Xanthomonas oryzae pv. oryz...    34   7.2  
tr|Q8T8P0|Q8T8P0_STRPU Testis potassium dependent sodium/calcium...    34   7.2  

>tr|Q3U9R3|Q3U9R3_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.38
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 364 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 200
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q3U5K6|Q3U5K6_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=I830134H01Rik PE=2 SV=1
          Length = 150

 Score = 38.1 bits (87), Expect = 0.38
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 364 RSPAHSHLHSHIRVHSLHHRNRPSK---RWSKRVDSRGRRMRWPCTRHIPCRPSCGGC 200
           RSP H+H H+H   H+  H + P       + R   +GR +    T  +    SCG C
Sbjct: 91  RSPTHTHTHTHTHTHTHTHTHTPGAGEGSLNSRAQRKGREVHCSSTSALQNLGSCGSC 148


>tr|Q2KFP6|Q2KFP6_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea 70-15 GN=MGCH7_ch7g639 PE=4 SV=1
          Length = 1139

 Score = 38.1 bits (87), Expect = 0.38
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -2

Query: 352 HSHLHSHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCPWRRIRQL 173
           HSH+H+H+ V S    + P +  S+    R +R R  C +    R  C G CP RR    
Sbjct: 15  HSHVHTHMAVDSPQPDDVPDEDLSEHARPR-KRTRRACDKCSNSRTRCNGECPCRRCVDY 73

Query: 172 ACGCS-QFSARQRAKAP 125
              C      ++R +AP
Sbjct: 74  GYTCRYNREVKKRGRAP 90


>tr|Q3SNP1|Q3SNP1_NITWN Integrase, catalytic region OS=Nitrobacter
           winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_2850
           PE=4 SV=1
          Length = 329

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
 Frame = -2

Query: 385 GQEKKSLRSPAHSHLHSH---IRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRP 215
           G+  K+L++P    +H      R  S+HHR+ PS   ++ +  R RR   P  R  P RP
Sbjct: 229 GRRLKTLKAPHTLRVHLQTMDFRARSIHHRSNPSNAGTEHLGHRRRRRPSP-DRSSPLRP 287

Query: 214 SCG--GCCPWRRIRQLACG---CSQFSARQRA 134
             G  G C        AC    C+ F  R +A
Sbjct: 288 RIGVSGSC----AASSACPRPICASFPRRSQA 315


>tr|A6BL21|A6BL21_9CYAN Putative uncharacterized protein
           OS=Leptolyngbya valderiana BDU 20041 GN=LVAL_00016 PE=4
           SV=1
          Length = 111

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = -2

Query: 367 LRSPAHSHLHSHIRVHSLHHRN-----RPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGG 203
           L  PAH+H H H    S   +      RP +RW  R++   R       R IPC      
Sbjct: 4   LTHPAHTHPHPHPVAVSPRRQTGFDIFRPLRRWIDRIEVTHRLFAHLVCRVIPC------ 57

Query: 202 CCPWRR 185
           CCP+ R
Sbjct: 58  CCPFER 63


>tr|Q6ESE4|Q6ESE4_ORYSJ Putative uncharacterized protein P0605D08.33
           OS=Oryza sativa subsp. japonica GN=P0605D08.33 PE=4 SV=1
          Length = 528

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 361 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 242
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|Q0E0P6|Q0E0P6_ORYSJ Os02g0533000 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0533000 PE=4 SV=1
          Length = 527

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 361 SPAHSHLHSHIRV---HSLHHRNRPSKRWSKRVDSRGRRMRWP 242
           SP H HLH H+RV   H   H + PS RW   V +R   ++ P
Sbjct: 35  SPYHHHLHLHLRVAHHHHGRHPHPPSPRWRHDVRARAGTIQAP 77


>tr|Q5GYP9|Q5GYP9_XANOR Regucalcin OS=Xanthomonas oryzae pv. oryzae
           GN=XOO2918 PE=4 SV=1
          Length = 697

 Score = 33.9 bits (76), Expect = 7.2
 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
 Frame = -2

Query: 385 GQEKKSLRSPAHSHLHS--HIRVHSL-----------HHRNRPS------KRWSKRVDSR 263
           G+  + L +P   HLHS    R H L            HR+  +      +    R D R
Sbjct: 227 GRTGRVLPAPGRQHLHSAGRRRAHVLAFRIQERAVCRRHRHGAAGPVACRRHHRMRQDRR 286

Query: 262 GRR-MRWPCTRHIPCRPSCGGCCPWRRIRQLACGCSQFSAR---QRAKAP 125
            RR +R      +P RP   GC P R +R   CG +    R   QR + P
Sbjct: 287 DRRSLRCRLRAALPARPDRAGCMPARGLRLAQCGAAGTEHRHSLQRRRRP 336


>tr|Q8T8P0|Q8T8P0_STRPU Testis potassium dependent sodium/calcium
           exchanger OS=Strongylocentrotus purpuratus PE=2 SV=1
          Length = 652

 Score = 33.9 bits (76), Expect = 7.2
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
 Frame = -2

Query: 367 LRSPAHSHLH--SHIRVHSLHHRNRPSKRWSKRVDSRGRRMRWPCTRHIPCRPSCGGCCP 194
           L  P H H H   H   H  H +    +   K+ +        P  R +PC P+     P
Sbjct: 375 LNHPHHHHHHHDEHDGDHKPHAQGEKEEEEDKKSEDSEEE---PTLRPLPCLPAINMYYP 431

Query: 193 WRRIRQLACGCSQFSAR 143
            + I +  CGC ++S +
Sbjct: 432 DKEILESTCGCLRYSLK 448