DK962052 |
Clone id |
TST39A01NGRL0011_N05 |
Library |
TST39 |
Length |
705 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_N05. 5' end sequence. |
Accession |
DK962052 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
CGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAAGA GAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCCC CCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTTG ATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGG GCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAATC GCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCATC TTCCCGGCTACGACAGCGTCCAGGAGGAAGATCTGAAGCAATTCAGGCAATGGGAGAGCC GAACTCCTGGGCATCCTGAAAACTTTGAGACGCCTGGTGTGGAGGTTACTACAGGGCCCC TTGGCCAAGGTATTTGCAATGCCGTTGGATTAGCTCTGGCCGAGAAGCACCTGGCTGCCC GCTTCAACAAGCCAGATGCCACTGTTGTGGATCACTACACGTACTGTATTGTGGGAGATG GGTGCAACATGGAGGGCGTGTCAAATGAAGCATGCTCTCTTGCGGGACACTGGGGTCTTG GAAAGCTGATTGCTTTCTATGACGACAACCATATTTCTATTGATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
189 |
Score (bit) |
371.0 |
E-value |
1.0e-102 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962052|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_N05, 5' (692 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 371 e-102 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 371 e-102 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 367 e-101 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 347 3e-95 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 323 4e-88 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 315 1e-85 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 247 4e-65 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 247 4e-65 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 244 3e-64 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 241 2e-63 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 241 4e-63 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 240 5e-63 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 240 6e-63 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 239 8e-63 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 239 1e-62 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 239 1e-62 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 239 1e-62 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 239 1e-62 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 239 1e-62 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 238 2e-62 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 238 3e-62 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 238 3e-62 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 237 5e-62 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 235 1e-61 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 235 1e-61 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 234 3e-61 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 234 3e-61 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 234 3e-61 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 234 3e-61 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 234 4e-61
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 371 bits (953), Expect = e-102 Identities = 168/189 (88%), Positives = 179/189 (94%) Frame = +3
Query: 126 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 305 TD ++VEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRD Sbjct: 76 TDAAIVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRD 135
Query: 306 RFVLSAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLG 485 RFVLSAGHGCMLQYALLHL GYDSVQE+DLK FRQW SR PGHPENFETPGVEVTTGPLG Sbjct: 136 RFVLSAGHGCMLQYALLHLAGYDSVQEDDLKSFRQWGSRIPGHPENFETPGVEVTTGPLG 195
Query: 486 QGICNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGK 665 QGI NAVGLA+AEKHLAARFNKPDA +VDHYTY I+GDGC MEG+SNE CSLAGHWGLGK Sbjct: 196 QGIANAVGLAVAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGISNEVCSLAGHWGLGK 255
Query: 666 LIAFYDDNH 692 LIAFYDDNH Sbjct: 256 LIAFYDDNH 264
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 371 bits (953), Expect = e-102 Identities = 168/185 (90%), Positives = 179/185 (96%) Frame = +3
Query: 138 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 317 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 318 SAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 497 SAGHGCMLQYALLHL GYDSV+EEDLKQFRQW SRTPGHPENFETPGVEVTTGPLGQGI Sbjct: 75 SAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIA 134
Query: 498 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAF 677 NAVGLALAEKHLAARFNKPD+ +VDHYTY I+GDGC MEG++NEACSLAGHWGLGKLIAF Sbjct: 135 NAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAF 194
Query: 678 YDDNH 692 YDDNH Sbjct: 195 YDDNH 199
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 367 bits (942), Expect = e-101 Identities = 171/190 (90%), Positives = 178/190 (93%), Gaps = 1/190 (0%) Frame = +3
Query: 126 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 302 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 303 DRFVLSAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPL 482 DRFVLSAGHGCMLQYALLHL GYDSV EEDLK FRQW SR PGHPENFETPGVEVTTGPL Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSVLEEDLKTFRQWGSRIPGHPENFETPGVEVTTGPL 194
Query: 483 GQGICNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLG 662 GQGI NAVGLALAEKHLAARFNKPDA +VDHYTY I+GDGC MEG++ EACSLAGHWGLG Sbjct: 195 GQGIANAVGLALAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGIAQEACSLAGHWGLG 254
Query: 663 KLIAFYDDNH 692 KLIAFYDDNH Sbjct: 255 KLIAFYDDNH 264
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 347 bits (890), Expect = 3e-95 Identities = 158/185 (85%), Positives = 169/185 (91%) Frame = +3
Query: 138 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 317 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 318 SAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 497 SAGHGCMLQYALLHL GYDSV+EEDLK RQW SRTP HPENFETPGVEVTTGPLGQGI Sbjct: 73 SAGHGCMLQYALLHLSGYDSVKEEDLKSLRQWGSRTPAHPENFETPGVEVTTGPLGQGIA 132
Query: 498 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAF 677 +AVGLA+AEKHLAAR+NKP +VDHYTY I+GDGC MEGVSNEACSLA HWGLGKLIA Sbjct: 133 SAVGLAVAEKHLAARYNKPGFEIVDHYTYVILGDGCQMEGVSNEACSLAAHWGLGKLIAL 192
Query: 678 YDDNH 692 YDDNH Sbjct: 193 YDDNH 197
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 323 bits (829), Expect = 4e-88 Identities = 147/185 (79%), Positives = 162/185 (87%) Frame = +3
Query: 138 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 317 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 318 SAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGIC 497 SAGHG ML Y LLHL GYDSV+ EDLK RQW S+TP HPENFETPGVEVTTGPLGQG+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVKVEDLKGLRQWGSKTPAHPENFETPGVEVTTGPLGQGVG 136
Query: 498 NAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAF 677 +AVGLALAEKHL AR+NKPD +VDHYTY I+GDGC MEG+SNEA SLA HWGLGKLIA Sbjct: 137 SAVGLALAEKHLGARYNKPDFEMVDHYTYMILGDGCQMEGISNEASSLAAHWGLGKLIAL 196
Query: 678 YDDNH 692 YDDNH Sbjct: 197 YDDNH 201
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 315 bits (808), Expect = 1e-85 Identities = 149/186 (80%), Positives = 160/186 (86%) Frame = +3
Query: 135 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 314 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 315 LSAGHGCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGI 494 LSAGHG MLQYALL+L GYDSV ED+KQFRQWES+TPGHPENF T GVEVTTGPLGQGI Sbjct: 67 LSAGHGSMLQYALLYLTGYDSVSIEDIKQFRQWESKTPGHPENFMTAGVEVTTGPLGQGI 126
Query: 495 CNAVGLALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIA 674 N VGLA+AE HLAA+FNKPDA +VDHYTY I+GDGCNMEGVS EA S AGH GLGKLIA Sbjct: 127 ANGVGLAIAEAHLAAKFNKPDAKIVDHYTYVILGDGCNMEGVSGEAASFAGHLGLGKLIA 186
Query: 675 FYDDNH 692 YDDNH Sbjct: 187 LYDDNH 192
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 247 bits (631), Expect = 4e-65 Identities = 117/179 (65%), Positives = 142/179 (79%) Frame = +3
Query: 156 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 335 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 336 MLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 515 ML Y+LLHL GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 516 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNH 692 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+ Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNN 186
>sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1 Length = 668
Score = 247 bits (631), Expect = 4e-65 Identities = 117/179 (65%), Positives = 142/179 (79%) Frame = +3
Query: 156 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 335 N IRFL++DAV+KA SGHPG PMG A + +L+ + +++NP NP+W +RDRF+LS GHG Sbjct: 9 NAIRFLSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPSNPHWADRDRFILSNGHGS 68
Query: 336 MLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 515 ML Y+LLHL GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG A Sbjct: 69 MLIYSLLHLSGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGFA 127
Query: 516 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNH 692 +AEK LA +FN+P +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+ Sbjct: 128 IAEKTLAHQFNRPGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNN 186
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 244 bits (623), Expect = 3e-64 Identities = 116/180 (64%), Positives = 139/180 (77%) Frame = +3
Query: 150 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 329 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 330 GCMLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVG 509 G ML Y+LLHL GYD + E+L+ FRQW S+TPGHPE TPGVE TTGPLGQG+ AVG Sbjct: 69 GSMLLYSLLHLTGYD-LSLEELQNFRQWGSKTPGHPEYGHTPGVEATTGPLGQGVAMAVG 127
Query: 510 LALAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDN 689 +A+AE+HLAA +N+ +VDHYTY I GDG MEGVS EA SLAGH LG++I YD N Sbjct: 128 MAMAERHLAATYNRDGYNIVDHYTYTICGDGDLMEGVSAEAASLAGHLKLGRMILLYDSN 187
>sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1 Length = 665
Score = 241 bits (616), Expect = 2e-63 Identities = 116/179 (64%), Positives = 140/179 (78%) Frame = +3
Query: 156 NTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGC 335 N IR LA+D+V+KA SGHPG PMG A + +L+ + +++NP NP W +RDRFVLS GHG Sbjct: 9 NAIRVLAMDSVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPTNPKWADRDRFVLSNGHGS 68
Query: 336 MLQYALLHLPGYDSVQEEDLKQFRQWESRTPGHPENFETPGVEVTTGPLGQGICNAVGLA 515 ML Y+LLHL GYD + EDLKQFRQ S+TPGHPE PGVE TTGPLGQGI NAVG+A Sbjct: 69 MLIYSLLHLTGYD-LSIEDLKQFRQLHSKTPGHPEYGYAPGVETTTGPLGQGITNAVGMA 127
Query: 516 LAEKHLAARFNKPDATVVDHYTYCIVGDGCNMEGVSNEACSLAGHWGLGKLIAFYDDNH 692 +AEK LA +FN+ +VDH+TY +GDGC MEG+S+EACSLAG GLGKLIAFYDDN+ Sbjct: 128 IAEKTLAGQFNREGHEIVDHHTYVFLGDGCLMEGISHEACSLAGTLGLGKLIAFYDDNN 186
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SUL8 |
Definition |
tr|A9SUL8|A9SUL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
189 |
Score (bit) |
375.0 |
E-value |
1.0e-102 |
Report |
|