DK962057 |
Clone id |
TST39A01NGRL0011_N10 |
Library |
TST39 |
Length |
651 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_N10. 5' end sequence. |
Accession |
DK962057 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1208Contig1 |
Sequence |
CATTTTCTCAATCCACAGCTATGGCGTCCTCAGCGGGGATCTGCAGCTATGCGCCGTCCA CAGGAGCTTCTTTCGCCCACATTAACGCATCCTGTTCTTCTCAGAAGCGCCTGCTATTCC CTTCCCCCTTCTTCTGCCACAACCCTCAGCTCTGCGTTTCATTCTTCCTCCACCCCAAGC TCCACAAGCCCTTGACCATAGTCTGCGACAGCCGCACAGCCGAAGTCTCCCTTCAAGATT TCTCCGTTGTGGAGGCATCCCCTCAGGTATCTCTCTTCGATTTCAAATCCTACATGCAGG TAAAGGCCGGCAATGTCAATGCTGCCCTTGACCAGGCGGTGCCTCTGATTTACCCCATGA GAATTCATGAATCCATGCGCTACTCACTTCTTGCAGGCGGCAAGCGCGTGCGGCCCATGC TCTGTATTGCTGCGTGTGAGCTTGTGAGTGGCCTTGAGGAAACTGCCATGCCCTCTGCAT GTGCGATGGAGATGATTCACACTATGTCCCTCATCCATGATGACCTTCCGTGTATGGATA ATGATGATTTGAGGCGAGGAAGACCCACCAATCATAAGCATTTTGGTGAAGATGTCGCGG TGCTTGCAGGTGATGCTCTTCTGAGCCTAGCATTTGAGCATATTGTGAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42698 |
Definition |
sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus |
Align length |
181 |
Score (bit) |
213.0 |
E-value |
7.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962057|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_N10, 5' (651 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthetase, c... 213 7e-55 sp|P34802|GGPP1_ARATH Geranylgeranyl pyrophosphate synthetase 1,... 206 9e-53 sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthetase, c... 203 6e-52 sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, c... 202 1e-51 sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthetase, c... 198 2e-50 sp|Q9LUD9|GGPP3_ARATH Geranylgeranyl pyrophosphate synthetase 3,... 189 8e-48 sp|Q9SLG2|GGPP4_ARATH Geranylgeranyl pyrophosphate synthetase 4 ... 186 7e-47 sp|O04046|GGPP2_ARATH Geranylgeranyl pyrophosphate synthetase 2 ... 182 1e-45 sp|O22043|GGPP6_ARATH Geranylgeranyl pyrophosphate synthetase 6,... 154 3e-37 sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthetase hom... 153 7e-37 sp|Q39108|GGR_ARATH Geranylgeranyl pyrophosphate synthase-relate... 148 2e-35 sp|Q08291|ISPA_BACST Geranyltranstransferase OS=Bacillus stearot... 121 4e-27 sp|P54383|ISPA_BACSU Geranyltranstransferase OS=Bacillus subtili... 120 6e-27 sp|O66126|ISPA_MICLU Geranyltranstransferase OS=Micrococcus lute... 116 1e-25 sp|P45204|ISPA_HAEIN Geranyltranstransferase OS=Haemophilus infl... 102 2e-21 sp|O66952|ISPA_AQUAE Geranyltranstransferase OS=Aquifex aeolicus... 100 7e-21 sp|P22939|ISPA_ECOLI Geranyltranstransferase OS=Escherichia coli... 98 3e-20 sp|Q53479|IDSA_METTM Bifunctional short chain isoprenyl diphosph... 97 7e-20 sp|P22873|CRTE_ESCVU Geranylgeranyl pyrophosphate synthetase OS=... 93 1e-18 sp|P21684|CRTE_PANAN Geranylgeranyl pyrophosphate synthetase OS=... 92 3e-18 sp|Q58270|IDSA_METJA Bifunctional short chain isoprenyl diphosph... 91 5e-18 sp|O26156|IDSA_METTH Bifunctional short chain isoprenyl diphosph... 90 9e-18 sp|P95999|GGPS_SULSO Geranylgeranyl pyrophosphate synthetase OS=... 89 2e-17 sp|P55539|ISPA_RHISN Probable geranyltranstransferase OS=Rhizobi... 89 3e-17 sp|Q45220|ISPA_BRAJA Probable geranyltranstransferase OS=Bradyrh... 89 3e-17 sp|P57537|ISPA_BUCAI Geranyltranstransferase OS=Buchnera aphidic... 84 5e-16 sp|P54976|CRTE_RHOS4 Geranylgeranyl pyrophosphate synthetase OS=... 84 5e-16 sp|Q8K9A0|ISPA_BUCAP Geranyltranstransferase OS=Buchnera aphidic... 84 6e-16 sp|P39464|GGPS_SULAC Geranylgeranyl pyrophosphate synthetase OS=... 81 5e-15 sp|P17060|CRTE_RHOCA Geranylgeranyl pyrophosphate synthetase OS=... 80 9e-15
>sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1 Length = 357
Score = 213 bits (542), Expect = 7e-55 Identities = 114/181 (62%), Positives = 129/181 (71%), Gaps = 11/181 (6%) Frame = +3
Query: 135 CH--NPQLCVSFFLHPKLHKPL---------TIVCDSRTAEVSLQDFSVVEASPQVSLFD 281 CH QL +SFFL + KP+ I+ +T E S A S FD Sbjct: 6 CHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFD 65
Query: 282 FKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGLEE 461 FK+YM KA +VN AL+ AV + P++IHESMRYSLLAGGKRVRPMLCIAACEL G E Sbjct: 66 FKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTES 125
Query: 462 TAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEH 641 AMPSACA+EMIHTMSL+HDDLPCMDNDDLRRG+PTNHK FGEDVAVLAGDALL+ AFEH Sbjct: 126 VAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEH 185
Query: 642 I 644 I Sbjct: 186 I 186
>sp|P34802|GGPP1_ARATH Geranylgeranyl pyrophosphate synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=GGPS1 PE=2 SV=2 Length = 371
Score = 206 bits (524), Expect = 9e-53 Identities = 101/125 (80%), Positives = 110/125 (88%) Frame = +3
Query: 270 SLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVS 449 S FDF SY+ KA VN ALD AVPL P++IHE+MRYSLLAGGKRVRP+LCIAACELV Sbjct: 72 SSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVG 131
Query: 450 GLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSL 629 G E TAMP+ACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNHK FGEDVAVLAGDALLS Sbjct: 132 GEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSF 191
Query: 630 AFEHI 644 AFEH+ Sbjct: 192 AFEHL 196
>sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthetase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1 Length = 366
Score = 203 bits (517), Expect = 6e-52 Identities = 102/150 (68%), Positives = 122/150 (81%) Frame = +3
Query: 195 TIVCDSRTAEVSLQDFSVVEASPQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHES 374 T+ S ++ ++ +D ++ +S S FDF SY+ KA +VN ALD AVPL P++IHE+ Sbjct: 46 TVSSSSSSSLITKEDNNLKSSS---SSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEA 102
Query: 375 MRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLR 554 MRYSLLAGGKRVRP+LCIAACELV G E AMP+ CA+EMIHTMSLIHDDLPCMDNDDLR Sbjct: 103 MRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLR 162
Query: 555 RGRPTNHKHFGEDVAVLAGDALLSLAFEHI 644 RG+PTNHK +GEDVAVLAGDALLS AFEH+ Sbjct: 163 RGKPTNHKVYGEDVAVLAGDALLSFAFEHL 192
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1 Length = 370
Score = 202 bits (514), Expect = 1e-51 Identities = 115/195 (58%), Positives = 136/195 (69%), Gaps = 3/195 (1%) Frame = +3
Query: 69 SFAHINASCSSQKRLLFPSPFFCHNP--QLCVSFFLHPKLHKPLTIVCDSRTAEV-SLQD 239 S+ A+ S K F PF NP L +SF + K +P++ V T E +LQ+ Sbjct: 13 SYVLNQATRSRSKSKSFSLPF---NPLKSLAISF-AYRKSERPISSVSAIITKEEETLQE 68
Query: 240 FSVVEASPQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPM 419 E + FDFKSYM K ++N AL+ A+PL P +IHESMRYSLLAGGKRVRP Sbjct: 69 ----EQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPA 124
Query: 420 LCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVA 599 LC+AACELV G + AMP+ACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNH FGEDVA Sbjct: 125 LCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVA 184
Query: 600 VLAGDALLSLAFEHI 644 VLAGDALL+ AFEHI Sbjct: 185 VLAGDALLAFAFEHI 199
>sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Capsicum annuum GN=GGPS1 PE=3 SV=1 Length = 369
Score = 198 bits (503), Expect = 2e-50 Identities = 104/165 (63%), Positives = 126/165 (76%), Gaps = 5/165 (3%) Frame = +3
Query: 168 LHPKLHK-----PLTIVCDSRTAEVSLQDFSVVEASPQVSLFDFKSYMQVKAGNVNAALD 332 ++PKL+K PLT+ + T E +EA+ F+FK Y+ KA +VN ALD Sbjct: 40 INPKLNKKRPFSPLTVSAIATTKEDER-----IEAAQTEEPFNFKIYVTEKAISVNKALD 94
Query: 333 QAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSL 512 +A+ + P IHE+MRYSLLAGGKRVRPMLC+AACELV G +E AM +ACA+EMIHTMSL Sbjct: 95 EAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSL 154
Query: 513 IHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEHIV 647 IHDDLPCMDNDDLRRG+PTNHK +GEDVAVLAGD+LL+ AFEHIV Sbjct: 155 IHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIV 199
>sp|Q9LUD9|GGPP3_ARATH Geranylgeranyl pyrophosphate synthetase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=2 SV=1 Length = 360
Score = 189 bits (481), Expect = 8e-48 Identities = 93/125 (74%), Positives = 107/125 (85%) Frame = +3
Query: 270 SLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVS 449 S FDFK YM KA +VNAALD +VPL P+ + E++RYSLLAGGKRVRP+LCIA CELV Sbjct: 62 SAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVG 121
Query: 450 GLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSL 629 G E TAM +ACA+EMIHT SLIHDDLPCMDN DLRRG+PTNHK +GED+AVLAGDALL+L Sbjct: 122 GDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLAL 181
Query: 630 AFEHI 644 AFEH+ Sbjct: 182 AFEHM 186
>sp|Q9SLG2|GGPP4_ARATH Geranylgeranyl pyrophosphate synthetase 4 OS=Arabidopsis thaliana GN=GGPP4 PE=2 SV=1 Length = 372
Score = 186 bits (473), Expect = 7e-47 Identities = 87/123 (70%), Positives = 105/123 (85%) Frame = +3
Query: 276 FDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGL 455 FDFK YM KA +N ALD+A+PLI P+ IH++MRY++LAGGKRVRP+LC+AACELV G Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 456 EETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAF 635 E A+ +ACA+EMIHTMSLI DDLPCMDNDDLRRG+PT HK FGE VA+L+G ALL+LAF Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 636 EHI 644 EH+ Sbjct: 199 EHL 201
>sp|O04046|GGPP2_ARATH Geranylgeranyl pyrophosphate synthetase 2 OS=Arabidopsis thaliana GN=GGPP2 PE=2 SV=2 Length = 376
Score = 182 bits (462), Expect = 1e-45 Identities = 84/123 (68%), Positives = 105/123 (85%) Frame = +3
Query: 276 FDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGL 455 F+F YM KA +VN AL++A+P+ P++IHE+MRY++LA GKRVRP+LC+A+CELV G Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 142
Query: 456 EETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAF 635 E AMP+ACA+EMIHTMSLI DDLPCMDNDDLRRG+PT HK +GE VA+L+G ALLSLAF Sbjct: 143 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 202
Query: 636 EHI 644 EH+ Sbjct: 203 EHM 205
>sp|O22043|GGPP6_ARATH Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2 Length = 336
Score = 154 bits (390), Expect = 3e-37 Identities = 76/126 (60%), Positives = 95/126 (75%), Gaps = 8/126 (6%) Frame = +3
Query: 279 DFKSYMQVKAGNVNAALDQAVPLIYP--------MRIHESMRYSLLAGGKRVRPMLCIAA 434 +F SYM+ KA ++N ALD ++PL + +H++MRY+LL GGKRVRPMLC+ A Sbjct: 31 EFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVA 90
Query: 435 CELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGD 614 CELV G E TAMP+ACA+EMIH SLI DDLPCMD+D LRRG+PTNHK FGE ++LA + Sbjct: 91 CELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASN 150
Query: 615 ALLSLA 632 AL SLA Sbjct: 151 ALRSLA 156
>sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthetase homolog OS=Cyanophora paradoxa GN=crtE PE=3 SV=1 Length = 300
Score = 153 bits (387), Expect = 7e-37 Identities = 73/128 (57%), Positives = 97/128 (75%) Frame = +3
Query: 261 PQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACE 440 P + F+ +Y+ + V L++++P P I++S+RYSL AGGKR+RP+LC+A+CE Sbjct: 3 PLQTNFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCE 62
Query: 441 LVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDAL 620 L G E A+P+ACA+EMIHTMSLIHDDLP MDND RRG+PTNH +GED+A+LAGDAL Sbjct: 63 LAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDAL 122
Query: 621 LSLAFEHI 644 L+ AFE I Sbjct: 123 LAYAFEFI 130
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8W1R9 |
Definition |
tr|Q8W1R9|Q8W1R9_ABIGR Geranylgeranyl diphosphate synthase OS=Abies grandis |
Align length |
214 |
Score (bit) |
211.0 |
E-value |
3.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962057|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_N10, 5' (651 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8W1R9|Q8W1R9_ABIGR Geranylgeranyl diphosphate synthase OS=Ab... 211 3e-53 tr|Q6QLV1|Q6QLV1_ANTMA Geranyl diphosphate synthase large subuni... 208 2e-52 tr|Q64KQ5|Q64KQ5_GINBI Geranylgeranyl diphosphate synthase OS=Gi... 208 2e-52 tr|Q9ZPM3|Q9ZPM3_TAXCA Geranylgeranyl diphosphate synthase OS=Ta... 206 8e-52 tr|Q6Q291|Q6Q291_9CONI Geranylgeranyl diphosphate synthase OS=Ta... 206 8e-52 tr|Q2HYC6|Q2HYC6_9CONI Geranylgeranyl diphosphate synthase OS=Ta... 206 8e-52 tr|B7FFD9|B7FFD9_MEDTR Putative uncharacterized protein (Fragmen... 206 8e-52 tr|Q8LKJ1|Q8LKJ1_ABIGR Geranyl diphosphate synthase OS=Abies gra... 206 1e-51 tr|Q8LAW5|Q8LAW5_ARATH Geranylgeranyl pyrophosphate synthase OS=... 206 1e-51 tr|Q0WUL9|Q0WUL9_ARATH Geranylgeranyl pyrophosphate synthase OS=... 206 1e-51 tr|B1A9K9|B1A9K9_PICAB Geranylgeranyl diphosphate synthase 5 OS=... 205 2e-51 tr|B1A9K6|B1A9K6_PICAB Geranyl diphosphate synthase 2 OS=Picea a... 204 4e-51 tr|Q0H8U3|Q0H8U3_SOLLC Geranylgeranyl pyrophosphate synthetase-l... 204 5e-51 tr|Q5G1J1|Q5G1J1_9LAMI Geranyl diphosphate synthase OS=Picrorhiz... 203 8e-51 tr|A9T5D6|A9T5D6_PHYPA Predicted protein OS=Physcomitrella paten... 202 1e-50 tr|A9ZN20|A9ZN20_HEVBR Geranylgeranyl-diphosphate synthase OS=He... 201 3e-50 tr|Q1A7T0|Q1A7T0_SOLLC Geranylgeranyl pyrophosphate synthase 1 O... 201 4e-50 tr|B1A9L0|B1A9L0_PICAB Geranylgeranyl diphosphate synthase 6 OS=... 201 4e-50 tr|Q8LSC4|Q8LSC4_9ROSI Geranylgeranyl pyrophosphate synthase OS=... 199 2e-49 tr|A7PV07|A7PV07_VITVI Chromosome chr4 scaffold_32, whole genome... 198 3e-49 tr|A5AX87|A5AX87_VITVI Putative uncharacterized protein OS=Vitis... 198 3e-49 tr|Q9SBR3|Q9SBR3_MENPI Geranyl diphosphate synthase large subuni... 197 4e-49 tr|A7XDE3|A7XDE3_9LAMI Geranyl pyrophosphate synthase large subu... 197 4e-49 tr|Q6R3F3|Q6R3F3_9LAMI Geranylgeranyl pyrophosphate synthase (Fr... 197 5e-49 tr|Q9SXZ6|Q9SXZ6_DAUCA GGPP synthase OS=Daucus carota PE=2 SV=1 197 6e-49 tr|Q8LSC5|Q8LSC5_9ROSI Geranylgeranyl pyrophosphate synthase OS=... 197 6e-49 tr|Q2VEY2|Q2VEY2_DAUCA Putative geranylgeranyl pyrophosphate syn... 197 6e-49 tr|Q9SSU0|Q9SSU0_9ROSI Geranylgeranyl pyrophosphate synthase OS=... 196 1e-48 tr|Q8LKJ3|Q8LKJ3_ABIGR Geranyl diphosphate synthase OS=Abies gra... 196 1e-48 tr|Q2HXJ9|Q2HXJ9_CHRMO Geranylgeranyl pyrophosphate synthase OS=... 196 1e-48
>tr|Q8W1R9|Q8W1R9_ABIGR Geranylgeranyl diphosphate synthase OS=Abies grandis PE=2 SV=1 Length = 383
Score = 211 bits (537), Expect = 3e-53 Identities = 123/214 (57%), Positives = 143/214 (66%), Gaps = 6/214 (2%) Frame = +3
Query: 21 MASSAGICSYAPSTGASFAHINASCSSQKRLLFPSP-FFCHNPQLCVSFFLHPKLHKPLT 197 MA S SY G F +I + KRL PS F +P L S L + L+ Sbjct: 1 MAYSGMATSYH---GLHFMNIATQECNLKRLSIPSRRFHGVSPSLWASNGFQGHLKRELS 57
Query: 198 ----IVCDSRTAEVSLQDFSVVE-ASPQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMR 362 +V SR + + ++ E +V FDFK Y++ KA VN ALD+AVPL YP R Sbjct: 58 ANSFLVSSSRYSNTIAKFTNLPEKVKEKVIEFDFKEYLRSKAMAVNEALDRAVPLRYPER 117
Query: 363 IHESMRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDN 542 IHE+MRYSLLAGGKRVRP+LCI+ACELV G EE AMP+ACAMEMIHTMSLIHDDLPCMDN Sbjct: 118 IHEAMRYSLLAGGKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDN 177
Query: 543 DDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEHI 644 DD RRG+PTNHK FGE A+LAGDALLS AFEHI Sbjct: 178 DDFRRGKPTNHKVFGEGTAILAGDALLSFAFEHI 211
>tr|Q6QLV1|Q6QLV1_ANTMA Geranyl diphosphate synthase large subunit OS=Antirrhinum majus PE=2 SV=1 Length = 372
Score = 208 bits (530), Expect = 2e-52 Identities = 100/124 (80%), Positives = 112/124 (90%) Frame = +3
Query: 279 DFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGLE 458 DFK+YM KA +VN AL+QAV L P++IHESMRYSLLAGGKRVRPMLCIAACELV GLE Sbjct: 80 DFKTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGLE 139
Query: 459 ETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFE 638 TAMPSACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNHK +GEDVAVLAGDALL+ +FE Sbjct: 140 STAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFE 199
Query: 639 HIVR 650 H+ + Sbjct: 200 HVAK 203
>tr|Q64KQ5|Q64KQ5_GINBI Geranylgeranyl diphosphate synthase OS=Ginkgo biloba GN=ggpps PE=2 SV=1 Length = 391
Score = 208 bits (530), Expect = 2e-52 Identities = 101/125 (80%), Positives = 109/125 (87%) Frame = +3
Query: 276 FDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVSGL 455 FDFK YM KA +VN ALD+AVP YP +IHESMRYSLLAGGKRVRP LCIAACELV G Sbjct: 97 FDFKKYMYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGT 156
Query: 456 EETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSLAF 635 E+ AMP+ACAMEMIHTM+LIHDDLPCMDND+LRRG+PTNHK FGED AVLAGDALLS AF Sbjct: 157 EDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAF 216
Query: 636 EHIVR 650 EHI R Sbjct: 217 EHIAR 221
>tr|Q9ZPM3|Q9ZPM3_TAXCA Geranylgeranyl diphosphate synthase OS=Taxus canadensis PE=2 SV=1 Length = 393
Score = 206 bits (525), Expect = 8e-52 Identities = 104/155 (67%), Positives = 119/155 (76%), Gaps = 1/155 (0%) Frame = +3
Query: 183 HKPLTIVCDSRTAEVSLQDFSVVEASPQVSL-FDFKSYMQVKAGNVNAALDQAVPLIYPM 359 +K ++ S L D + E + + FDF YM+ KA V+AALD+A+PL YP Sbjct: 67 YKQCSVSSKSTKTMAQLVDLAETEKAEGKDIEFDFNEYMKSKAVAVDAALDKAIPLEYPE 126
Query: 360 RIHESMRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMD 539 +IHESMRYSLLAGGKRVRP LCIAACELV G ++ AMP+ACAMEMIHTMSLIHDDLPCMD Sbjct: 127 KIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMD 186
Query: 540 NDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEHI 644 NDD RRG+PTNHK FGED AVLAGDALLS AFEHI Sbjct: 187 NDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHI 221
>tr|Q6Q291|Q6Q291_9CONI Geranylgeranyl diphosphate synthase OS=Taxus x media GN=GGPPS PE=2 SV=1 Length = 393
Score = 206 bits (525), Expect = 8e-52 Identities = 104/155 (67%), Positives = 119/155 (76%), Gaps = 1/155 (0%) Frame = +3
Query: 183 HKPLTIVCDSRTAEVSLQDFSVVEASPQVSL-FDFKSYMQVKAGNVNAALDQAVPLIYPM 359 +K ++ S L D + E + + FDF YM+ KA V+AALD+A+PL YP Sbjct: 67 YKQCSVSSKSTKTMAQLVDLAETEKAEGKDIEFDFNEYMKSKAVAVDAALDKAIPLEYPE 126
Query: 360 RIHESMRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMD 539 +IHESMRYSLLAGGKRVRP LCIAACELV G ++ AMP+ACAMEMIHTMSLIHDDLPCMD Sbjct: 127 KIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMD 186
Query: 540 NDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEHI 644 NDD RRG+PTNHK FGED AVLAGDALLS AFEHI Sbjct: 187 NDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHI 221
>tr|Q2HYC6|Q2HYC6_9CONI Geranylgeranyl diphosphate synthase OS=Taxus wallichiana PE=2 SV=1 Length = 393
Score = 206 bits (525), Expect = 8e-52 Identities = 104/155 (67%), Positives = 119/155 (76%), Gaps = 1/155 (0%) Frame = +3
Query: 183 HKPLTIVCDSRTAEVSLQDFSVVEASPQVSL-FDFKSYMQVKAGNVNAALDQAVPLIYPM 359 +K ++ S L D + E + + FDF YM+ KA V+AALD+A+PL YP Sbjct: 67 YKQCSVSSKSTKTMAQLVDLAETEKAEGKDIEFDFNEYMKSKAVAVDAALDKAIPLEYPE 126
Query: 360 RIHESMRYSLLAGGKRVRPMLCIAACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMD 539 +IHESMRYSLLAGGKRVRP LCIAACELV G ++ AMP+ACAMEMIHTMSLIHDDLPCMD Sbjct: 127 KIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMD 186
Query: 540 NDDLRRGRPTNHKHFGEDVAVLAGDALLSLAFEHI 644 NDD RRG+PTNHK FGED AVLAGDALLS AFEHI Sbjct: 187 NDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHI 221
>tr|B7FFD9|B7FFD9_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 214
Score = 206 bits (525), Expect = 8e-52 Identities = 100/132 (75%), Positives = 113/132 (85%) Frame = +3
Query: 249 VEASPQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCI 428 +EA Q +F+FKSYM KA VN ALD AV L P+++HE+MRYSLLAGGKRVRP+LC+ Sbjct: 70 IEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCL 129
Query: 429 AACELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLA 608 AACELV G E AMP+ACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNHK FGEDVAVLA Sbjct: 130 AACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLA 189
Query: 609 GDALLSLAFEHI 644 GDALL+ AFEHI Sbjct: 190 GDALLAFAFEHI 201
>tr|Q8LKJ1|Q8LKJ1_ABIGR Geranyl diphosphate synthase OS=Abies grandis GN=GPPS3 PE=2 SV=1 Length = 387
Score = 206 bits (524), Expect = 1e-51 Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 9/190 (4%) Frame = +3
Query: 105 KRLLFPSPFF---------CHNPQLCVSFFLHPKLHKPLTIVCDSRTAEVSLQDFSVVEA 257 KR+ PS F C+ L + L + + SR++ +Q ++ E Sbjct: 27 KRIDIPSKRFDGVSTSFVACNGEHLGLPVNLKKEFLSCIQRASSSRSSNTIVQFANLPEQ 86
Query: 258 SPQVSLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAAC 437 +V FDF YM KA V ALD+A+P YP +IHESMRYSLLAGGKRVRP+LCIAAC Sbjct: 87 GKKVVEFDFNKYMLSKAMAVTEALDKAIPHSYPQKIHESMRYSLLAGGKRVRPVLCIAAC 146
Query: 438 ELVSGLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDA 617 ELV G EE AMP+ACAMEMIHTMSLIHDDLPCMDNDDLRRG+PTNHK FG+D A+LAGDA Sbjct: 147 ELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLAGDA 206
Query: 618 LLSLAFEHIV 647 L + AFEHIV Sbjct: 207 LHAFAFEHIV 216
>tr|Q8LAW5|Q8LAW5_ARATH Geranylgeranyl pyrophosphate synthase OS=Arabidopsis thaliana PE=2 SV=1 Length = 371
Score = 206 bits (524), Expect = 1e-51 Identities = 101/125 (80%), Positives = 110/125 (88%) Frame = +3
Query: 270 SLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVS 449 S FDF SY+ KA VN ALD AVPL P++IHE+MRYSLLAGGKRVRP+LCIAACELV Sbjct: 72 SSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVG 131
Query: 450 GLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSL 629 G E TAMP+ACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNHK FGEDVAVLAGDALLS Sbjct: 132 GEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSF 191
Query: 630 AFEHI 644 AFEH+ Sbjct: 192 AFEHL 196
>tr|Q0WUL9|Q0WUL9_ARATH Geranylgeranyl pyrophosphate synthase OS=Arabidopsis thaliana GN=At4g36810 PE=2 SV=1 Length = 371
Score = 206 bits (524), Expect = 1e-51 Identities = 101/125 (80%), Positives = 110/125 (88%) Frame = +3
Query: 270 SLFDFKSYMQVKAGNVNAALDQAVPLIYPMRIHESMRYSLLAGGKRVRPMLCIAACELVS 449 S FDF SY+ KA VN ALD AVPL P++IHE+MRYSLLAGGKRVRP+LCIAACELV Sbjct: 72 SSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVG 131
Query: 450 GLEETAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGRPTNHKHFGEDVAVLAGDALLSL 629 G E TAMP+ACA+EMIHTMSLIHDDLPCMDNDDLRRG+PTNHK FGEDVAVLAGDALLS Sbjct: 132 GEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSF 191
Query: 630 AFEHI 644 AFEH+ Sbjct: 192 AFEHL 196
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