DK962089
Clone id TST39A01NGRL0011_O20
Library
Length 659
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_O20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGCAATGGCTTCTACGAGCATGGCCTGCTCACACCAGCTGGTGCCTGCGCTGTCAGTTC
CTTTACCCAAATCCAGATTTCTGGGCGCTCCCTCCTTCGCACCTGCCCTCGCCTGCAGCA
ATGGTTCTCGTCTCACCTGCATGGCCTCTAGCGAGTGGCTGCCTGGCCAACCCCGCCCTG
CCCATCTGGATGGCTCCTCCCCTGGCGACTTTGGGTTCGACCCCCTCGGGCTCGCTGAGG
TACCCGAAAATTTCGCTCGCTTCAAGGAGTCTGAGCTCATTCACTGCAGATGGGCGATGC
TAGCTGTGCCAGGAATTCTGTTGCCAGAAGCTCTGGGGCTGGGTAACTGGGTGGATGCGC
AGAAATGGGCAGCTACGCCAGGCGGGCATGCCACCTATTTGGGCAATCCTGTACCCTGGG
GCAACCTGTCCTTCATTATTGCCTTCGAATTTTTTGCCATTGCTTTTTCAGAGGCTTTAA
GAAATGAGGAGAATGACCCTGAGAGAAGGAAGTATCCAGGTGGGCCATTTGACCCTCTTG
GTTTCTCCAAGGATGTTAAGAAGTTTGAGGAGTATAAGGTGAAGGAGTTGAAAAATGGTC
GTCTTGCCCTCATTGCCTTTGTAGGCTTTGCCATCCAAGCAGCAGCCTACCCTGGCACC
■■Homology search results ■■ -
sp_hit_id Q9SDM1
Definition sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare
Align length 220
Score (bit) 278.0
E-value 2.0e-74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962089|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_O20, 5'
(659 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 278 2e-74
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 252 1e-66
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 115 2e-25
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 114 6e-25
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 113 8e-25
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 113 1e-24
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 112 1e-24
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 112 2e-24
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 110 5e-24
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 110 5e-24
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 110 7e-24
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 110 7e-24
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 110 7e-24
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 110 7e-24
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 110 9e-24
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 109 1e-23
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 109 1e-23
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 109 1e-23
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 109 1e-23
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 109 1e-23
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 109 1e-23
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 109 1e-23
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 108 2e-23
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 108 2e-23
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 108 2e-23
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 108 2e-23
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 108 2e-23
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 108 3e-23
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 107 4e-23
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 107 4e-23

>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245

Score = 278 bits (711), Expect = 2e-74
Identities = 140/220 (63%), Positives = 159/220 (72%), Gaps = 2/220 (0%)
Frame = +3

Query: 6 MASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRP 179
MAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPRP
Sbjct: 1 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPRP 55

Query: 180 AHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDA 359
AHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV A
Sbjct: 56 AHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKA 115

Query: 360 QKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPL 539
Q+WAA P G ATYLGNPVPWGNL R E DPE++KYPGG FDPL
Sbjct: 116 QEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPL 175

Query: 540 GFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
GFSKD KFEE K+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 176 GFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGT 215


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246

Score = 252 bits (644), Expect = 1e-66
Identities = 124/217 (57%), Positives = 148/217 (68%)
Frame = +3

Query: 9 ASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAHL 188
++T M+C V + KS+F A P + S++W+PGQPRP++L
Sbjct: 3 SNTLMSCGIPAVCPSFLSSTKSKFAAA---MPVYVGATNFMSRFSMSADWMPGQPRPSYL 59

Query: 189 DGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKW 368
DGS+PGDFGFD LGL EVP N R+KESELIHCRWAMLAVPGI++PEALGLGNWV AQ+W
Sbjct: 60 DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119

Query: 369 AATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLGFS 548
AA PGG ATYLG PVPWG L R+ E D E++KYPGG FDPLG+S
Sbjct: 120 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 179

Query: 549 KDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
KD KFEE KVKE+KNGRLAL+A VGF +Q +AY GT
Sbjct: 180 KDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGT 216


>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280

Score = 115 bits (289), Expect = 2e-25
Identities = 65/162 (40%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Frame = +3

Query: 177 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGL--GNW 350
P +L+G GD+G+DP GL + PENFA+++ ELIH RWAML G ++PEAL N
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141

Query: 351 VDAQKWAAT-----PGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKY 515
W T G Y G +P + D E + +
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLH 201

Query: 516 PGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQA 641
PGGPFDPLG +KD ++ KVKE+KNGRLA+ A +GF IQA
Sbjct: 202 PGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQA 243



Score = 31.2 bits (69), Expect = 5.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3

Query: 528 FDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAA 644
+DP G K + F +Y+ EL + R A++ GF I A
Sbjct: 95 YDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
OS=Zea mays PE=2 SV=1
Length = 265

Score = 114 bits (284), Expect = 6e-25
Identities = 86/239 (35%), Positives = 110/239 (46%), Gaps = 27/239 (11%)
Frame = +3

Query: 6 MASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEW--------- 158
MAS++MA S +V +P S F A A ++ + S W
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAK--AKPAAASGSPWYGPDRVLYL 58

Query: 159 --LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 332
L G+P P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + PE
Sbjct: 59 GPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117

Query: 333 L-------GLGNWVDAQKWAATPGGHATYLGNP---------VPWGNLXXXXXXXXXXXX 464
L G W A + GG YLGNP W
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 176

Query: 465 XXXXLRNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQA 641
L E DP YPGG FDPLG + D + F E KVKELK GRLA+++ GF +QA
Sbjct: 177 AGGPL-GEVVDP---LYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQA 231


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274

Score = 113 bits (283), Expect = 8e-25
Identities = 72/175 (41%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Frame = +3

Query: 165 GQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEAL--- 335
G+P P++L G PGD+G+D GL+ PENFA+ +E E+IHCRWAML G + PE L
Sbjct: 72 GEP-PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARN 130

Query: 336 ----GLGNWVDAQKWAATPGGHATYLGNP---------VPWGNLXXXXXXXXXXXXXXXX 476
G W A + GG YLGNP W
Sbjct: 131 GVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGP 189

Query: 477 LRNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQA 641
L E DP YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA
Sbjct: 190 L-GEVTDP---IYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 240



Score = 37.4 bits (85), Expect = 0.071
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3

Query: 78 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 245
+LG PS A ++ ++ M + E + G P D PG FDPLGLAE P
Sbjct: 154 YLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGG-SFDPLGLAEDP 212

Query: 246 ENFARFKESELIHCRWAMLAVPGILL 323
E FA K E+ + R AM ++ G +
Sbjct: 213 EAFAELKVKEIKNGRLAMFSMFGFFV 238


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266

Score = 113 bits (282), Expect = 1e-24
Identities = 85/239 (35%), Positives = 114/239 (47%), Gaps = 27/239 (11%)
Frame = +3

Query: 6 MASTSMACSHQLVPALSVP-LPKSRFLGAPSFAPALACSNGSRLTCMASSEW-------- 158
MA+T+M+ S +V LP S +G + +++ +SS W
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVS--SSSPWYGSDRVLY 58

Query: 159 ---LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPE 329
L G+P P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + PE
Sbjct: 59 LGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 330 AL-------GLGNWVDAQKWAATPGGHATYLGNP--VPWGNLXXXXXXXXXXXXXXXXLR 482
L G W A + GG YLGNP V +L R
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYR 176

Query: 483 ------NEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQA 641
E DP YPGG FDPLG ++ + F E KVKE+KNGRLA+ + GF +QA
Sbjct: 177 IAGGPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQA 232



Score = 38.9 bits (89), Expect = 0.024
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +3

Query: 78 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 245
+LG PS A +L ++ M + E + G P +D PG FDPLGLAE P
Sbjct: 146 YLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGG-SFDPLGLAERP 204

Query: 246 ENFARFKESELIHCRWAMLAVPGILLPEAL-GLGNWVDAQKWAATPGGHATYL 401
+ FA K E+ + R AM ++ G + + G G D A P + +L
Sbjct: 205 QAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWL 257


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
SV=1
Length = 276

Score = 112 bits (281), Expect = 1e-24
Identities = 75/206 (36%), Positives = 94/206 (45%), Gaps = 43/206 (20%)
Frame = +3

Query: 156 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 248
W PG P LDGS GD GFDP GL + E
Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118

Query: 249 --------------NFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAATPGG 386
RF+E ELIH RWAML G + EAL W DA K G
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177

Query: 387 HATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLGFSKDVKKF 566
++YLG P+P+ +L RN E DPE+R YPGG FDPLG + D +K
Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 235

Query: 567 EEYKVKELKNGRLALIAFVGFAIQAA 644
+ K+ E+K+ RLA++AF+ FA+QAA
Sbjct: 236 DTLKLAEIKHSRLAMVAFLIFALQAA 261


>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1,
chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1
Length = 266

Score = 112 bits (280), Expect = 2e-24
Identities = 71/172 (41%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Frame = +3

Query: 165 GQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEAL--- 335
G+P P++L G PGD+G+D GL+ PE FAR +E E+IHCRWAML G + PE L
Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 121

Query: 336 ----GLGNWVDAQKWAATPGGHATYLGNP--VPWGNLXXXXXXXXXXXXXXXXLRNEEND 497
G W A + GG YLGNP V ++ R
Sbjct: 122 GVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEG 180

Query: 498 P----ERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQA 641
P E YPGG FDPLG + D + F E KVKE+KNGRLA+ + GF +QA
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 267

Score = 110 bits (276), Expect = 5e-24
Identities = 86/241 (35%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Frame = +3

Query: 6 MASTSMACSHQLVPALSVPL--PKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR- 176
MAS++MA S + +V L S +G + + G T +SS W G R
Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRIT--MRKTAGKPKTVQSSSPWY-GPDRV 57

Query: 177 ----------PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLP 326
P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + P
Sbjct: 58 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 117

Query: 327 EAL-------GLGNWVDAQKWAATPGGHATYLGNP---------VPWGNLXXXXXXXXXX 458
E L G W A + GG YLGNP W
Sbjct: 118 ELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGY 176

Query: 459 XXXXXXLRNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQ 638
L E DP YPGG FDPLG + D + F E KVKE+KNGRLA+ + GF +Q
Sbjct: 177 RIAGGPL-GEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232

Query: 639 A 641
A
Sbjct: 233 A 233


>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80,
chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
Length = 269

Score = 110 bits (276), Expect = 5e-24
Identities = 86/241 (35%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Frame = +3

Query: 3 AMASTSMACSHQLVPALSVPL-PKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR- 176
A +S+SMA S + + L P S+ LGA F + S ++ + S W G R
Sbjct: 3 ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFT--MRKSATTKKVASSGSPWY-GPDRV 59

Query: 177 ----------PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLP 326
P++L G PGD+G+D GL+ PE F++ +E E+IH RWAML G + P
Sbjct: 60 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFP 119

Query: 327 EAL-------GLGNWVDAQKWAATPGGHATYLGNP---------VPWGNLXXXXXXXXXX 458
E L G W A + GG YLGNP W
Sbjct: 120 ELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGY 178

Query: 459 XXXXXXLRNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQ 638
L E DP YPGG FDPLG + D + F E KVKELKNGRLA+ + GF +Q
Sbjct: 179 RIAGGPL-GEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 234

Query: 639 A 641
A
Sbjct: 235 A 235


tr_hit_id A9NS16
Definition tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 219
Score (bit) 280.0
E-value 4.0e-74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962089|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_O20, 5'
(659 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea... 280 4e-74
tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea... 280 4e-74
tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea... 280 6e-74
tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten... 279 1e-73
tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 279 1e-73
tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ... 278 3e-73
tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs... 278 3e-73
tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote... 276 8e-73
tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza... 275 1e-72
tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 273 5e-72
tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic... 270 4e-71
tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis... 269 1e-70
tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl... 268 3e-70
tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O... 267 5e-70
tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g... 266 6e-70
tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei... 266 1e-69
tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten... 265 2e-69
tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul... 264 4e-69
tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (... 262 2e-68
tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten... 260 5e-68
tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F... 236 1e-60
tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar... 235 2e-60
tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar... 205 2e-51
tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F... 183 9e-45
tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys... 182 1e-44
tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar... 178 2e-43
tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ... 176 1e-42
tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O... 158 2e-37
tr|Q7DM26|Q7DM26_CHLRE Light harvesting complex protein I-20 OS=... 157 5e-37
tr|Q05093|Q05093_CHLRE Light harvesting complex I protein (Light... 157 5e-37

>tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 280 bits (717), Expect = 4e-74
Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 3/219 (1%)
Frame = +3

Query: 12 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S+EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPP 58

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
KWAA PG ATYLG PVPWG L RN E DPE+RKYPGG FDPLG
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLG 178

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KF+EYKVKE+KNGRLAL+AFVGF +QA+A PGT
Sbjct: 179 FSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGT 217


>tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 280 bits (717), Expect = 4e-74
Identities = 140/219 (63%), Positives = 163/219 (74%), Gaps = 3/219 (1%)
Frame = +3

Query: 12 STSMACSHQLVP---ALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
+T++ C H + P A + KSRF +P+ + +L NGSR++ S+EW+PGQPRPA
Sbjct: 2 ATAVGCLHIVAPVAFAGTFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPA 58

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGS+PGDFGFDPLGL VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLGLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
KWAA PGG ATYLG PVPWG RN E D E+RKYPGG FDPLG
Sbjct: 119 KWAAIPGGQATYLGVPVPWGYFPIILSIFFLKMAFAESQRNGEPDLEKRKYPGGAFDPLG 178

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KFEEYKVKE+KNGRLAL+AFVGF +QA+A PGT
Sbjct: 179 FSKDPAKFEEYKVKEIKNGRLALLAFVGFCVQASANPGT 217


>tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 280 bits (716), Expect = 6e-74
Identities = 138/219 (63%), Positives = 162/219 (73%), Gaps = 3/219 (1%)
Frame = +3

Query: 12 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SDEWMPGQPRPP 58

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
KWAA PG ATYLG PVPWG L RN E DPE+RKYPGG FDPLG
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLG 178

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KF+EYKVKE+KNGRLAL+AFVGF +QA+A PGT
Sbjct: 179 FSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGT 217


>tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_139567 PE=4 SV=1
Length = 241

Score = 279 bits (714), Expect = 1e-73
Identities = 141/218 (64%), Positives = 161/218 (73%)
Frame = +3

Query: 6 MASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAH 185
MA+ + A ++V ++ S F G+ S + L CSNGSR+ CMA EWLPG PRP++
Sbjct: 1 MATAAAAQVSRVVTGVATAQKSSFFAGSSSVS-LLGCSNGSRV-CMA--EWLPGNPRPSY 56

Query: 186 LDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQK 365
LDGS+PGDFGFDPLGL EVPEN RFKESELIH RWAMLAVPG+L+PEALG GNWV AQK
Sbjct: 57 LDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEALGYGNWVSAQK 116

Query: 366 WAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLGF 545
WAATPGG ATYLGNPVPWGNL RN E DPE+RKYPGG FDPLGF
Sbjct: 117 WAATPGGQATYLGNPVPWGNLPVILAIEFLAIAFAESQRNGEPDPEKRKYPGGAFDPLGF 176

Query: 546 SKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
SK EE K+KE+KNGRLAL+AF+GFA+QA AYPGT
Sbjct: 177 SKGA-NLEELKLKEIKNGRLALVAFLGFAVQAIAYPGT 213


>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 245

Score = 279 bits (713), Expect = 1e-73
Identities = 143/220 (65%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Frame = +3

Query: 6 MASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRP 179
MAS+S +CS VP+L P +S L AP A A + R+T S+EW+PGQPRP
Sbjct: 3 MASSSGLRSCSAVGVPSLLAPSSRSGRL-APFCANA---TTSGRVTM--SAEWMPGQPRP 56

Query: 180 AHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDA 359
AHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPGIL+PEALGLGNWV A
Sbjct: 57 AHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKA 116

Query: 360 QKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPL 539
Q+WAA PGG ATYLG PVPWG L R E DPE++KYPGG FDPL
Sbjct: 117 QEWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPL 176

Query: 540 GFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
GFSKD KFEEYK+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 177 GFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGT 216


>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza
sativa GN=Cab26 PE=2 SV=1
Length = 241

Score = 278 bits (710), Expect = 3e-73
Identities = 137/219 (62%), Positives = 160/219 (73%), Gaps = 1/219 (0%)
Frame = +3

Query: 6 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
+WAA PGG ATYLGNPVPWG L R E DPE++KYPGG FDPLG
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KFEEYK+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 174 FSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGT 212


>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp.
japonica GN=P0578B12.4 PE=2 SV=1
Length = 241

Score = 278 bits (710), Expect = 3e-73
Identities = 137/219 (62%), Positives = 160/219 (73%), Gaps = 1/219 (0%)
Frame = +3

Query: 6 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
+WAA PGG ATYLGNPVPWG L R E DPE++KYPGG FDPLG
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KFEEYK+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 174 FSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGT 212


>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein
OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1
Length = 246

Score = 276 bits (706), Expect = 8e-73
Identities = 139/221 (62%), Positives = 158/221 (71%), Gaps = 2/221 (0%)
Frame = +3

Query: 3 AMASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR 176
AMAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPR
Sbjct: 2 AMASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPR 56

Query: 177 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVD 356
PAHLDGSSPGDFGFDPLGL VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV
Sbjct: 57 PAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVK 116

Query: 357 AQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDP 536
AQ+WAA PGG ATY G PVPWGNL R E DPE++KYPGG FDP
Sbjct: 117 AQEWAAVPGGQATYFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDPEKKKYPGGAFDP 176

Query: 537 LGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
LGFSKD K EEYK+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 177 LGFSKDPVKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGT 217


>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22755 PE=4 SV=1
Length = 241

Score = 275 bits (704), Expect = 1e-72
Identities = 136/219 (62%), Positives = 159/219 (72%), Gaps = 1/219 (0%)
Frame = +3

Query: 6 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 182
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53

Query: 183 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 362
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113

Query: 363 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFDPLG 542
+WAA PGG ATYLGNPVPWG L R E DPE++KYPGG FDPLG
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173

Query: 543 FSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
FSKD KFEEYK+KE+KNGRLA++AFV F +Q +AYPGT
Sbjct: 174 FSKDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSAYPGT 212


>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 249

Score = 273 bits (699), Expect = 5e-72
Identities = 139/222 (62%), Positives = 160/222 (72%), Gaps = 3/222 (1%)
Frame = +3

Query: 3 AMASTSM---ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQP 173
AMAS+S +CS VP+L P S A A ++G R+T S+EW+PGQP
Sbjct: 2 AMASSSSGLRSCSALGVPSLLAPSTSSSSRSGRLPFCAHATTSG-RVTM--SAEWMPGQP 58

Query: 174 RPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWV 353
RPAHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV
Sbjct: 59 RPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWV 118

Query: 354 DAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGGPFD 533
AQ+WAA PGG ATYLG PVPWG L R E DPE++KYPGG FD
Sbjct: 119 KAQEWAAVPGGQATYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDPEKKKYPGGAFD 178

Query: 534 PLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 659
PLGFS+D K EEYK+KE+KNGRLA++AFVGF +Q +AYPGT
Sbjct: 179 PLGFSRDPAKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGT 220