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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962096
Clone id TST39A01NGRL0011_P03
Library
Length 692
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_P03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AAAAAGGGCGAAAAAGGAGCTTTTCTGGCTATGGCCGAGGGCAGGCAGACGAGAGACCCG
GATTCCTCTCCTTCCTCTTGAATTCACCTCATCATCTACCACCGTTCTCTCTCATCACTT
TCCTAACTGAGGAAAGGTGAGGTTCCCGCAGCTATGTCCTCTTCGATGCTCTCTTCTCTC
GCCTCTGGTTCTTCTGTGCGTGTTGGTGATGGTGGGGCTCGTCCATTTTCTCCTTCTGCT
TTCGGAAGGTCACCATCCGCTCGTTTGGCGCCTCTGATTTTCTCAGAAAGGAGAAATGCG
CTTGCATCCACTGACCTTGTATTCGGATTGGGGTTCAACAGTACGAAGCCCACCAGACAT
GGATTGGGATTCCGTTTTGGGTGCATTAAAGGGGTTGGATTTGAGAAAGCCTTCACAGGG
ATCAGGCTGGATGTGCCGACACTGCTATCATTCCGAGGTGACGCAGCTCCATATGGAAAC
AATTCCGGAAAGCTGAAATCTACTGAAGCTCGCAGGCAACGCCTGTGCTCAGTGAGAGCC
ACCGCCTCAGCAGGCAGCTTGGCAGCTTCGGACCCTGCACCAAAGCCTGCCCCCAAGAAG
TTTTTGGGCGTGGATGCGATAACTCTTAAGAAGGTGATACCTTTGGGCTTGATGTTCTTC
TGCATTCTGTTCAATTACACAATACTTCGTGA
■■Homology search results ■■ -
sp_hit_id O24381
Definition sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tuberosum
Align length 56
Score (bit) 62.8
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962096|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_P03, 5'
         (677 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tu...    63   2e-09
sp|P92935|TLC2_ARATH ADP,ATP carrier protein 2, chloroplastic OS...    55   3e-07
sp|Q39002|TLC1_ARATH ADP,ATP carrier protein 1, chloroplastic OS...    54   6e-07
sp|O84068|TLC1_CHLTR ADP,ATP carrier protein 1 OS=Chlamydia trac...    41   0.005
sp|Q9Z8J2|TLC1_CHLPN ADP,ATP carrier protein 1 OS=Chlamydia pneu...    41   0.005
sp|Q9PKX5|TLC1_CHLMU ADP,ATP carrier protein 1 OS=Chlamydia muri...    41   0.005
sp|Q68XS7|TLCA_RICTY ADP,ATP carrier protein 1 OS=Rickettsia typ...    32   2.4  
sp|P19568|TLCA_RICPR ADP,ATP carrier protein 1 OS=Rickettsia pro...    32   2.4  
sp|Q8BP47|SYNC_MOUSE Asparaginyl-tRNA synthetase, cytoplasmic OS...    32   2.4  
sp|Q4UN85|TLCA_RICFE ADP,ATP carrier protein 1 OS=Rickettsia fel...    32   4.0  
sp|Q92JI6|TLCA_RICCN ADP,ATP carrier protein 1 OS=Rickettsia con...    32   4.0  
sp|Q1RGS8|TLCA_RICBR ADP,ATP carrier protein 1 OS=Rickettsia bel...    32   4.0  
sp|Q6P0U9|NUPL2_DANRE Nucleoporin-like 2 OS=Danio rerio GN=nupl2...    32   4.0  
sp|P0C7I6|YS023_HUMAN Coiled-coil domain-containing protein LOC1...    31   5.3  
sp|P28986|VGLC_HHV1K Glycoprotein C OS=Human herpesvirus 1 (stra...    31   5.3  
sp|P10228|VGLC_HHV11 Glycoprotein C OS=Human herpesvirus 1 (stra...    31   5.3  
sp|A2AJT4|SFR18_MOUSE Splicing factor, arginine/serine-rich 18 O...    31   5.3  
sp|Q68W11|TLCE_RICTY ADP,ATP carrier protein 5 OS=Rickettsia typ...    31   6.9  
sp|O05962|TLCE_RICPR ADP,ATP carrier protein 5 OS=Rickettsia pro...    31   6.9  
sp|Q4UN46|TLCE_RICFE ADP,ATP carrier protein 5 OS=Rickettsia fel...    31   6.9  
sp|P72204|TONB_PASHA Protein tonB OS=Pasteurella haemolytica GN=...    27   8.5  
sp|P34708|TRA1_CAEEL Sex-determining transformer protein 1 OS=Ca...    30   9.0  
sp|Q92GI5|TLCE_RICCN ADP,ATP carrier protein 5 OS=Rickettsia con...    30   9.0  
sp|Q1RK92|TLCE_RICBR ADP,ATP carrier protein 5 OS=Rickettsia bel...    30   9.0  
sp|Q4R4Z1|SYNC_MACFA Asparaginyl-tRNA synthetase, cytoplasmic OS...    30   9.0  
sp|O43776|SYNC_HUMAN Asparaginyl-tRNA synthetase, cytoplasmic OS...    30   9.0  

>sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum
           tuberosum PE=2 SV=2
          Length = 631

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +1

Query: 508 LCSVRATASAGSLXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           +C   A A+AG+              F+G++ +TLKK+IPLG MFFCILFNYTILR
Sbjct: 77  ICKAEAAAAAGAADGQPLFVEKEQPKFMGIELVTLKKIIPLGAMFFCILFNYTILR 132


>sp|P92935|TLC2_ARATH ADP,ATP carrier protein 2, chloroplastic
           OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2
          Length = 618

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 490 EARRQRLCSVRATASAGS--LXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFNY 663
           E  R  +C   A A+ G                   GV+  TLKK++PLGLMFFCILFNY
Sbjct: 68  ERSRGFICKAEAAAAGGGNVFDEGDTAAMAVSPKIFGVEVTTLKKIVPLGLMFFCILFNY 127

Query: 664 TILR 675
           TILR
Sbjct: 128 TILR 131


>sp|Q39002|TLC1_ARATH ADP,ATP carrier protein 1, chloroplastic
           OS=Arabidopsis thaliana GN=AATP1 PE=2 SV=2
          Length = 624

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 592 GVDAITLKKVIPLGLMFFCILFNYTILR 675
           GV+  TLKK+IPLGLMFFCILFNYTILR
Sbjct: 107 GVEVATLKKIIPLGLMFFCILFNYTILR 134


>sp|O84068|TLC1_CHLTR ADP,ATP carrier protein 1 OS=Chlamydia
           trachomatis GN=tlcA PE=3 SV=1
          Length = 528

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +1

Query: 610 LKKVIPLGLMFFCILFNYTILR 675
           LKKV+P+ LMFFCI FNYTILR
Sbjct: 24  LKKVLPMFLMFFCISFNYTILR 45


>sp|Q9Z8J2|TLC1_CHLPN ADP,ATP carrier protein 1 OS=Chlamydia
           pneumoniae GN=tlcA PE=3 SV=1
          Length = 515

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 610 LKKVIPLGLMFFCILFNYTILR 675
           LKKV+P+ LMFFCI FNYT+LR
Sbjct: 24  LKKVLPMFLMFFCITFNYTVLR 45


>sp|Q9PKX5|TLC1_CHLMU ADP,ATP carrier protein 1 OS=Chlamydia
           muridarum GN=tlcA PE=3 SV=1
          Length = 529

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +1

Query: 610 LKKVIPLGLMFFCILFNYTILR 675
           LKKV+P+ LMFFCI FNYTILR
Sbjct: 24  LKKVLPMFLMFFCISFNYTILR 45


>sp|Q68XS7|TLCA_RICTY ADP,ATP carrier protein 1 OS=Rickettsia typhi
           GN=tlcA PE=3 SV=1
          Length = 498

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 613 KKVIPLGLMFFCILFNYTILR 675
           KK +PL  M FCIL NY+ LR
Sbjct: 26  KKFLPLAFMMFCILLNYSTLR 46


>sp|P19568|TLCA_RICPR ADP,ATP carrier protein 1 OS=Rickettsia
           prowazekii GN=tlcA PE=1 SV=1
          Length = 498

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 613 KKVIPLGLMFFCILFNYTILR 675
           KK +PL  M FCIL NY+ LR
Sbjct: 26  KKFLPLAFMMFCILLNYSTLR 46


>sp|Q8BP47|SYNC_MOUSE Asparaginyl-tRNA synthetase, cytoplasmic
           OS=Mus musculus GN=Nars PE=1 SV=2
          Length = 559

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 262 SEAPNERMVTFRKQKEKMDEPHHHQHAQKNQRREKRASKRT*LREPHLSSVRKVMREN 89
           S+  NER     K + K  +   H+   KN  REK+ ++    RE +L   +K++ +N
Sbjct: 59  SQKENERWDVISKSQMKNIKKMWHREQMKNDSREKKEAEDNLRREKNLEEAKKIIIKN 116


>sp|Q4UN85|TLCA_RICFE ADP,ATP carrier protein 1 OS=Rickettsia felis
           GN=tlcA PE=3 SV=1
          Length = 498

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 613 KKVIPLGLMFFCILFNYTILR 675
           KK +P+  M FCIL NY+ LR
Sbjct: 26  KKFLPMAFMMFCILLNYSTLR 46
tr_hit_id Q59IV2
Definition tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter OS=Mesembryanthemum crystallinum
Align length 52
Score (bit) 60.5
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962096|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_P03, 5'
         (677 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter ...    60   1e-07
tr|A9T5L7|A9T5L7_PHYPA Predicted protein OS=Physcomitrella paten...    57   8e-07
tr|Q6H8E4|Q6H8E4_ORYSJ cDNA, clone: J100090E08, full insert sequ...    57   1e-06
tr|Q5VQU1|Q5VQU1_ORYSJ Putative plastidic ATP/ADP transporter (O...    57   1e-06
tr|Q2TJ67|Q2TJ67_ORYSJ Plastid ATP/ADP transporter OS=Oryza sati...    57   1e-06
tr|Q0E2W7|Q0E2W7_ORYSJ Os02g0208100 protein OS=Oryza sativa subs...    57   1e-06
tr|A2ZVZ6|A2ZVZ6_ORYSJ Putative uncharacterized protein OS=Oryza...    57   1e-06
tr|A2X295|A2X295_ORYSI Putative uncharacterized protein OS=Oryza...    57   1e-06
tr|A2WT73|A2WT73_ORYSI Putative uncharacterized protein OS=Oryza...    57   1e-06
tr|Q0ZCE3|Q0ZCE3_POPTR Plastid ATP/ADP-transporter OS=Populus tr...    57   1e-06
tr|B4FPJ4|B4FPJ4_MAIZE Putative uncharacterized protein OS=Zea m...    56   2e-06
tr|Q8MFR8|Q8MFR8_9ROSI Plastidic ATP/ADP transporter (Fragment) ...    56   2e-06
tr|B6SVL2|B6SVL2_MAIZE Plastidic ATP/ADP-transporter OS=Zea mays...    56   2e-06
tr|A9TN60|A9TN60_PHYPA Predicted protein OS=Physcomitrella paten...    56   2e-06
tr|A7P7N6|A7P7N6_VITVI Chromosome chr9 scaffold_7, whole genome ...    56   2e-06
tr|A5BVR2|A5BVR2_VITVI Putative uncharacterized protein OS=Vitis...    56   2e-06
tr|Q0IJY1|Q0IJY1_ORYSJ Putative plastidic ATP/ADP transporter OS...    55   4e-06
tr|Q1AK42|Q1AK42_MANES Plastid ATP/ADP transport protein 2 OS=Ma...    55   5e-06
tr|Q1AK41|Q1AK41_MANES Plastid ATP/ADP transport protein 2 OS=Ma...    55   5e-06
tr|Q5IX09|Q5IX09_PROWI Putative plastidic ATP/ADP-transporter (F...    54   7e-06
tr|Q0WW68|Q0WW68_ARATH Adenine nucleotide translocase OS=Arabido...    54   7e-06
tr|Q1AK43|Q1AK43_MANES Plastid ATP/ADP transport protein 1 OS=Ma...    54   1e-05
tr|A8JID6|A8JID6_CHLRE Plastidic ADP/ATP translocase OS=Chlamydo...    50   1e-04
tr|A6XGR5|A6XGR5_9CHLO Plastid ATP/ADP transporter (Fragment) OS...    50   1e-04
tr|A3A4D7|A3A4D7_ORYSJ Putative uncharacterized protein OS=Oryza...    50   2e-04
tr|A8HTX0|A8HTX0_CHLRE Plastidic ADP/ATP translocase OS=Chlamydo...    48   7e-04
tr|Q8WH67|Q8WH67_GALSU Plastidic ATP/ADP transporter (Fragment) ...    44   0.007
tr|Q70GG0|Q70GG0_9RICK Nucleotide transport protein (Fragment) O...    42   0.036
tr|B7GAX8|B7GAX8_PHATR Nucleotide transporter 1 OS=Phaeodactylum...    42   0.047
tr|Q823H5|Q823H5_CHLCV ADP, ATP carrier protein OS=Chlamydophila...    41   0.061

>tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter
           OS=Mesembryanthemum crystallinum GN=ANT1 PE=2 SV=1
          Length = 622

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +1

Query: 520 RATASAGSLXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           RA A+A +              FLG++ +TLKK+IPLGLMFFCILFNYTILR
Sbjct: 78  RAEAAAAAADGQPLYGEVQSPKFLGIELVTLKKIIPLGLMFFCILFNYTILR 129


>tr|A9T5L7|A9T5L7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_140664 PE=4 SV=1
          Length = 564

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 38/79 (48%), Positives = 43/79 (54%)
 Frame = +1

Query: 439 RGDAAPYGNNSGKLKSTEARRQRLCSVRATASAGSLXXXXXXXXXXXXXFLGVDAITLKK 618
           +G+  P G  SG          RL  VRA A+AG                LG++A T KK
Sbjct: 20  KGEQGPLGLGSGV---------RL-PVRAQAAAGGAALPSQPANK----ILGIEATTFKK 65

Query: 619 VIPLGLMFFCILFNYTILR 675
           VIPLGLMFFCILFNYTILR
Sbjct: 66  VIPLGLMFFCILFNYTILR 84


>tr|Q6H8E4|Q6H8E4_ORYSJ cDNA, clone: J100090E08, full insert
           sequence OS=Oryza sativa subsp. japonica GN=OJ1006_A02.6
           PE=2 SV=1
          Length = 630

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFNYTILR 119


>tr|Q5VQU1|Q5VQU1_ORYSJ Putative plastidic ATP/ADP transporter
           (Os01g0647100 protein) OS=Oryza sativa subsp. japonica
           GN=P0038D11.19 PE=4 SV=1
          Length = 642

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFNYTILR 140


>tr|Q2TJ67|Q2TJ67_ORYSJ Plastid ATP/ADP transporter OS=Oryza sativa
           subsp. japonica PE=4 SV=1
          Length = 644

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFNYTILR 140


>tr|Q0E2W7|Q0E2W7_ORYSJ Os02g0208100 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0208100 PE=4 SV=1
          Length = 640

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFNYTILR 119


>tr|A2ZVZ6|A2ZVZ6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_002718 PE=4 SV=1
          Length = 619

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 88  FLGVEVKTLKKIVPLGLMFFCILFNYTILR 117


>tr|A2X295|A2X295_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06319 PE=4 SV=1
          Length = 630

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFNYTILR 119


>tr|A2WT73|A2WT73_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03061 PE=4 SV=1
          Length = 642

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 586 FLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           FLGV+  TLKK++PLGLMFFCILFNYTILR
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFNYTILR 140


>tr|Q0ZCE3|Q0ZCE3_POPTR Plastid ATP/ADP-transporter OS=Populus
           trichocarpa PE=2 SV=1
          Length = 774

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/60 (50%), Positives = 36/60 (60%)
 Frame = +1

Query: 496 RRQRLCSVRATASAGSLXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFNYTILR 675
           R   +C  RA A+A +              FLG++  T KK+IPLGLMFFCILFNYTILR
Sbjct: 285 RNLHIC--RAEAAAAADGQPLFGEETDKPKFLGIELATFKKIIPLGLMFFCILFNYTILR 342