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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962115
Clone id TST39A01NGRL0011_P22
Library
Length 653
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_P22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACCTCCTCCTGGTCCCCGCCTAGAAGAGTTGCCTGCTGTGAGGAGACTGAGCCATGGCA
GCCAGCACAGCCTCCCTCTCATCTGCGACATTCAGTGGGCAGCAGCTGAATCCCGTGAAT
GAATTATCACGCAAGGTGGGAGCCGGTGAGGCTCGCGTGCAGATGATGGCACCCAAGAAG
GCCTCTTCCTCCGGCAGCATCTGGTATGGCGCCGACCGTCCCCTGTACCTGGGCCCTTTC
TCCGGCAGCCCACCGTCGTACTTGACGGGAGAATTCCCTGGAGACTACGGCTGGGACACC
GCTGGGCTGTCGGCGGATCCAGAGACCTTCGCAAAGAACCGGGAGCTGGAGGTTATCCAC
TCCAGGTGGGCAATGCTGGGCGCTCTTGGATGCGTCACCCCTGAACTTCTGGCCAAGAAC
GGCGTCAAGTTTGGAGAGGCCGTATGGTTCAAGGCGGGCTCACAAATCTTCGCAGATGGG
GGCCTCGACTACCTGGGTAATCCCAGCCTGGTGCACGCTCAAAGCATCCTAGCCATCTGG
GCCTGCCAGGTCATCCTCATGGGCGCCGTGGAGGGCTACCGCGTTGCAGGCGGGCCCCTG
GGTGAGGTGGAGGACCCCATTTACCCGGGCGGCTCCTTCGACCCCTTGGGTCT
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 185
Score (bit) 371.0
E-value 1.0e-102
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962115|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_P22, 5'
         (653 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   371   e-102
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   315   1e-85
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   311   1e-84
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   311   2e-84
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   309   7e-84
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   309   9e-84
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   307   3e-83
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   307   4e-83
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   306   5e-83
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   305   1e-82
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   305   1e-82
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   305   1e-82
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   304   2e-82
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   304   2e-82
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   304   2e-82
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   304   3e-82
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   303   5e-82
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   303   7e-82
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   302   9e-82
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   302   9e-82
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   302   1e-81
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   302   1e-81
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   301   2e-81
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   301   2e-81
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   301   3e-81
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   301   3e-81
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   301   3e-81
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   301   3e-81
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   300   6e-81
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   299   1e-80

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  371 bits (953), Expect = e-102
 Identities = 177/185 (95%), Positives = 181/185 (97%)
 Frame = +1

Query: 97  GQQLNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEF 276
           GQQL PVNELSRKVGAGEARVQMMAPK  + SGSIWYG+DRPLYLGPFSGSPPSYL+GEF
Sbjct: 14  GQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEF 73

Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 456
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 133

Query: 457 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 636
           GSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS
Sbjct: 134 GSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 193

Query: 637 FDPLG 651
           FDPLG
Sbjct: 194 FDPLG 198


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  315 bits (807), Expect = 1e-85
 Identities = 155/188 (82%), Positives = 168/188 (89%), Gaps = 3/188 (1%)
 Frame = +1

Query: 97  GQQL-NPVNELSRKV-GAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLT 267
           GQ L  PVNELSRKV G  EARV M     K++ S +IWYGADRP +LGPFSG  PSYL 
Sbjct: 14  GQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73

Query: 268 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVW 447
           GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 448 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 627
           FKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 193

Query: 628 GGSFDPLG 651
           GGSFDPLG
Sbjct: 194 GGSFDPLG 201



 Score = 31.2 bits (69), Expect = 5.0
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 241 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 420
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 421 G 423
           G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  311 bits (798), Expect = 1e-84
 Identities = 148/173 (85%), Positives = 158/173 (91%), Gaps = 4/173 (2%)
 Frame = +1

Query: 145 GEARVQMMA----PKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 312
           GEAR+ M      PK A+SSGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 313 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 492
           ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 493 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           LGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGG+FDPLG
Sbjct: 146 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLG 198


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  311 bits (796), Expect = 2e-84
 Identities = 148/173 (85%), Positives = 157/173 (90%), Gaps = 4/173 (2%)
 Frame = +1

Query: 145 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 312
           GEARV M       K A+SSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 313 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 492
           ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 493 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG+FDPLG
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLG 198


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  309 bits (792), Expect = 7e-84
 Identities = 147/177 (83%), Positives = 160/177 (90%), Gaps = 4/177 (2%)
 Frame = +1

Query: 133 KVGA-GEARVQM---MAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDT 300
           KVG+ GE R+ M   +   K ++SGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 301 AGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADG 480
           AGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++G
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 481 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLG
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 195


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  309 bits (791), Expect = 9e-84
 Identities = 147/173 (84%), Positives = 156/173 (90%), Gaps = 4/173 (2%)
 Frame = +1

Query: 145 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 312
           GEARV M       K A++SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 313 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 492
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 493 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           LGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLG
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 198


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  307 bits (787), Expect = 3e-83
 Identities = 146/172 (84%), Positives = 156/172 (90%), Gaps = 3/172 (1%)
 Frame = +1

Query: 145 GEARVQMM---APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 315
           GE R+ M    A  K ++SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 316 DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 495
           DPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 496 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLG
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 194


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  307 bits (786), Expect = 4e-83
 Identities = 146/170 (85%), Positives = 154/170 (90%), Gaps = 1/170 (0%)
 Frame = +1

Query: 145 GEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 321
           G A+  M     K+ SSGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 322 ETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 501
           ETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 502 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLG
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG 188


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
           1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 274

 Score =  306 bits (785), Expect = 5e-83
 Identities = 150/173 (86%), Positives = 156/173 (90%), Gaps = 4/173 (2%)
 Frame = +1

Query: 145 GEARVQMM--APKK--ASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 312
           GEARV M     KK  AS+S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 35  GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 313 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 492
           ADPE FAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDY
Sbjct: 95  ADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 154

Query: 493 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 651
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGGSFDPLG
Sbjct: 155 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG 207



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 241 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 420
           +G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G     ++   
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 245

Query: 421 G 423
           G
Sbjct: 246 G 246


>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80,
           chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
          Length = 269

 Score =  305 bits (782), Expect = 1e-82
 Identities = 149/186 (80%), Positives = 164/186 (88%), Gaps = 1/186 (0%)
 Frame = +1

Query: 97  GQQLNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGE 273
           G+QL  +N  S+++GA    ++  A  KK +SSGS WYG DR  YLGPFSG  PSYLTGE
Sbjct: 18  GKQLK-LNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFK 453
           FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 77  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 136

Query: 454 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 633
           AGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 137 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 196

Query: 634 SFDPLG 651
           SFDPLG
Sbjct: 197 SFDPLG 202
tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 182
Score (bit) 329.0
E-value 8.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962115|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0011_P22, 5'
         (653 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   329   8e-89
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   325   1e-87
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   325   1e-87
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   323   4e-87
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   323   6e-87
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   323   6e-87
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   323   6e-87
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   323   6e-87
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   321   3e-86
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   321   3e-86
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   321   3e-86
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   320   4e-86
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   318   1e-85
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   318   1e-85
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   315   2e-84
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   314   3e-84
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   314   3e-84
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ...   312   1e-83
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   312   1e-83
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   312   1e-83
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   312   1e-83
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ...   311   2e-83
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ...   311   2e-83
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ...   311   2e-83
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ...   311   2e-83
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   311   2e-83
tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subs...   311   2e-83
tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza...   311   2e-83
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   311   2e-83
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   311   2e-83

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  329 bits (844), Expect = 8e-89
 Identities = 158/182 (86%), Positives = 167/182 (91%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 285
           L PVNELSRKVG  EARV M   +K+S S SIWYGADRP +LGPFSG  PSYL GEF GD
Sbjct: 18  LKPVNELSRKVGTSEARVSM---RKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 286 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 465
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+Q
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQ 134

Query: 466 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 645
           IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 646 LG 651
           LG
Sbjct: 195 LG 196


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  325 bits (834), Expect = 1e-87
 Identities = 156/183 (85%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 282
           L PVNELSRKVG+ +ARV M     K++ S SIWYGADRP YLGPFSG  PSYL GEF G
Sbjct: 18  LKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 283 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 462
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 463 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 642
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 643 PLG 651
           PLG
Sbjct: 198 PLG 200


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  325 bits (833), Expect = 1e-87
 Identities = 155/182 (85%), Positives = 168/182 (92%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 285
           L PVNELSR+VGA EARV M   +K++ S SIWYGADRP +LGPFSG  PSYL GEF GD
Sbjct: 18  LKPVNELSRRVGANEARVTM---RKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 286 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 465
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 134

Query: 466 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 645
           IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 646 LG 651
           LG
Sbjct: 195 LG 196


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  323 bits (829), Expect = 4e-87
 Identities = 158/182 (86%), Positives = 166/182 (91%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 285
           L  +NELSRKVG  +ARV M   +KASSS SIWYGADRP YLGP SG  PSYLTGEF GD
Sbjct: 18  LKSINELSRKVGNVQARVTM---RKASSSDSIWYGADRPKYLGPLSGETPSYLTGEFAGD 74

Query: 286 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 465
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 75  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 134

Query: 466 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 645
           IF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 646 LG 651
           LG
Sbjct: 195 LG 196


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  323 bits (828), Expect = 6e-87
 Identities = 155/183 (84%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 282
           L PV+ELSRKV AGEARV M     K+S S SIWYGADRP +LGPFSG  PSYL GEF G
Sbjct: 19  LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 283 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 462
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 463 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 642
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 643 PLG 651
           PLG
Sbjct: 199 PLG 201


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  323 bits (828), Expect = 6e-87
 Identities = 155/183 (84%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 282
           L PV+ELSRKV AGEARV M     K+S S SIWYGADRP +LGPFSG  PSYL GEF G
Sbjct: 19  LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 283 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 462
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 463 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 642
           QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 643 PLG 651
           PLG
Sbjct: 199 PLG 201


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  323 bits (828), Expect = 6e-87
 Identities = 155/182 (85%), Positives = 167/182 (91%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 285
           L PVNELSRKVG+ EARV M    K S+S SIWYGADRP YLGPFSG  PSYLTGEF GD
Sbjct: 18  LKPVNELSRKVGSSEARVTMRRTVK-STSDSIWYGADRPKYLGPFSGETPSYLTGEFAGD 76

Query: 286 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 465
           YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 77  YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 136

Query: 466 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 645
           IF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGPLGE+ DPIYPGGSFDP
Sbjct: 137 IFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDP 196

Query: 646 LG 651
           LG
Sbjct: 197 LG 198


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  323 bits (828), Expect = 6e-87
 Identities = 155/183 (84%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
 Frame = +1

Query: 106 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 282
           L PVNELSRKVG  EARV M     K++ S SIWYGADRP +LGPFSG  PSYLTGEF G
Sbjct: 18  LKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAG 77

Query: 283 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 462
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 137

Query: 463 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 642
           QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 643 PLG 651
           PLG
Sbjct: 198 PLG 200


>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  321 bits (822), Expect = 3e-86
 Identities = 161/177 (90%), Positives = 163/177 (92%)
 Frame = +1

Query: 97  GQQLNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEF 276
           GQQL PVNELSRKVG  EARVQMMAPKK SSSG+I YGADR LYLGPFSGSPPSYLTGEF
Sbjct: 22  GQQLKPVNELSRKVGTSEARVQMMAPKK-SSSGNIRYGADRLLYLGPFSGSPPSYLTGEF 80

Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 456
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA
Sbjct: 81  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 140

Query: 457 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 627
           GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA  PL  +  P  P
Sbjct: 141 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAVVPLVRLRTPSTP 197


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  321 bits (822), Expect = 3e-86
 Identities = 156/187 (83%), Positives = 168/187 (89%), Gaps = 2/187 (1%)
 Frame = +1

Query: 97  GQQL-NPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTG 270
           GQ L  PVNELSRKVG  EARV M     K++ S SIWYGADRP +LGPFSG  PSYL G
Sbjct: 14  GQSLVKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNG 73

Query: 271 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 450
           EF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWF
Sbjct: 74  EFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWF 133

Query: 451 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPG 630
           KAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPG 193

Query: 631 GSFDPLG 651
           GSFDPLG
Sbjct: 194 GSFDPLG 200