| DK962160 |
| Clone id |
TST39A01NGRL0013_B22 |
| Library |
TST39 |
| Length |
539 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_B22. 5' end sequence. |
| Accession |
DK962160 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL214Contig1 |
| Sequence |
GGACGCGGTGCTGAAGGGATTTCAAGATGGGATATCACTGGGACTGGGGCTGGTGCCAGC
GGCCGGGCCCTTCCTGCAGCTTTTCTTTGGCCACGTCTGGGACCTGGCCCTGGCCGATCG
GACGGCGGCGCAGAAGAAGGCAGCCATGGACTCGCTCTTCGAGTCGGTGGGCAAACTGAT
CAGTCAGGCGCTGGCGGAGAGCGTGGCCGACCAGGCTCGCGCCTATAACGCCAGCATCGC
CCAGCTCGGCCAGGACTACCGTCTCTCCGTCGAGTCCTACAAAGAAAATGCTTCCTCTGT
TGCCGTCCAAAAGGTGGTGGTACGCTTTGAAAATTGCAAATCGACGTTGGTGCACATGCT
CAACCTCTATGCTCAACCTTCATACATGAAGCACACTGTGCTCTCATATGGTTCAGCTCT
TGCCTTGTATGTGGGCTTGCTTCGGGAGATGATGCTCGCAGGTGCAACTTGTGGATATAG
CAAAGCTGAGATTATTGACTTCCAGAATGATATCAATGAACACCTTGAATCTGCTTATA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O86170 |
| Definition |
sp|O86170|C19BA_BACUH Pesticidal crystal protein cry19Ba OS=Bacillus thuringiensis subsp. higo |
| Align length |
164 |
| Score (bit) |
48.9 |
| E-value |
2.0e-05 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962160|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_B22, 5'
(539 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O86170|C19BA_BACUH Pesticidal crystal protein cry19Ba OS=Baci... 49 2e-05
sp|Q45705|CR8BA_BACUK Pesticidal crystal protein cry8Ba OS=Bacil... 45 2e-04
sp|O53810|PG10_MYCTU Uncharacterized PE-PGRS family protein PE_P... 39 0.012
sp|A1SLK7|IF2_NOCSJ Translation initiation factor IF-2 OS=Nocard... 39 0.012
sp|O18740|K1C9_CANFA Keratin, type I cytoskeletal 9 OS=Canis fam... 39 0.021
sp|A4FM34|IF2_SACEN Translation initiation factor IF-2 OS=Saccha... 38 0.028
sp|A0PQC4|IF2_MYCUA Translation initiation factor IF-2 OS=Mycoba... 38 0.028
sp|P08123|CO1A2_HUMAN Collagen alpha-2(I) chain OS=Homo sapiens ... 38 0.028
sp|Q9S597|C27AA_BACUH Pesticidal crystal protein cry27Aa OS=Baci... 38 0.028
sp|P70399|TP53B_MOUSE Tumor suppressor p53-binding protein 1 OS=... 37 0.047
sp|O46392|CO1A2_CANFA Collagen alpha-2(I) chain OS=Canis familia... 37 0.061
sp|Q8CJQ8|IF2_STRCO Translation initiation factor IF-2 OS=Strept... 35 0.18
sp|P03211|EBNA1_EBV Epstein-Barr nuclear antigen 1 OS=Epstein-Ba... 35 0.18
sp|A3CXE7|DP2L_METMJ DNA polymerase II large subunit OS=Methanoc... 35 0.18
sp|P21561|YGY3_HALSQ Uncharacterized 50.6 kDa protein in the 5'r... 35 0.23
sp|Q12888|TP53B_HUMAN Tumor suppressor p53-binding protein 1 OS=... 35 0.23
sp|Q5TJF3|RING1_CANFA E3 ubiquitin-protein ligase RING1 OS=Canis... 35 0.23
sp|O53553|PG54_MYCTU Uncharacterized PE-PGRS family protein PE_P... 35 0.30
sp|Q9JMC2|INSM2_MOUSE Insulinoma-associated protein 2 OS=Mus mus... 35 0.30
sp|Q45718|CR1HB_BACTM Pesticidal crystal protein cry1Hb OS=Bacil... 35 0.30
sp|P02465|CO1A2_BOVIN Collagen alpha-2(I) chain OS=Bos taurus GN... 35 0.30
sp|A2T6X5|RING1_PANTR E3 ubiquitin-protein ligase RING1 OS=Pan t... 34 0.40
sp|A1YFY1|RING1_PANPA E3 ubiquitin-protein ligase RING1 OS=Pan p... 34 0.40
sp|Q8WMN5|RING1_MACMU E3 ubiquitin-protein ligase RING1 OS=Macac... 34 0.40
sp|A1YER5|RING1_GORGO E3 ubiquitin-protein ligase RING1 OS=Goril... 34 0.40
sp|P18834|COL14_CAEEL Cuticle collagen 14 OS=Caenorhabditis eleg... 34 0.40
sp|P05539|CO2A1_RAT Collagen alpha-1(II) chain OS=Rattus norvegi... 34 0.40
sp|P28481|CO2A1_MOUSE Collagen alpha-1(II) chain OS=Mus musculus... 34 0.40
sp|P02458|CO2A1_HUMAN Collagen alpha-1(II) chain OS=Homo sapiens... 34 0.40
sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo ... 34 0.52
>sp|O86170|C19BA_BACUH Pesticidal crystal protein cry19Ba
OS=Bacillus thuringiensis subsp. higo GN=cry19Ba PE=2
SV=1
Length = 682
Score = 48.9 bits (115), Expect = 2e-05
Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Frame = +2
Query: 44 LGLVPAAGPFLQLFFGHVWDLALADRTAAQKKAAMDSLFESVGKLISQALAESVADQARA 223
LG++P GP L W ++L T +K + + + V L+ Q L ++A +
Sbjct: 76 LGMIPEVGPLLS------WMVSLFWPTIEEKNTVWEDMIKYVANLLKQELTNDTLNRATS 129
Query: 224 YNASIAQLGQDYRLSVESYKENASSVAVQKVVVRFENCKSTLV--HMLNLYAQPSYMKHT 397
+ + + Y ++ ++K+N ++ A +++ + N L + + ++ Y
Sbjct: 130 NLSGLNESLNIYNRALAAWKQNKNNFASGELIRSYINDLHILFTRDIQSDFSLGGYETVL 189
Query: 398 VLSYGSALALYVGLLREMMLAGATCGYSKAEIIDFQNDINEHLE 529
+ SY SA L++ LLR++ + G GY ++ + N+ + E
Sbjct: 190 LPSYASAANLHLLLLRDVAIYGKELGYPSTDVEFYYNEQKYYTE 233
>sp|Q45705|CR8BA_BACUK Pesticidal crystal protein cry8Ba OS=Bacillus
thuringiensis subsp. kumamotoensis GN=cry8Ba PE=2 SV=1
Length = 1169
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = +2
Query: 41 GLGLVPAAGPFLQLFFGHVWDLALADRTAAQKKAAMDSLFESVGKLISQALAESVADQAR 220
GLG VP GP + L+ + L +++K+ + E V +LI+Q +AE ++A
Sbjct: 83 GLG-VPFVGPIVSLYTQLIDIL-----WPSKQKSQWEIFMEQVEELINQKIAEYARNKAL 136
Query: 221 AYNASIAQLGQDYRLSVESYKENAS-SVAVQKVVVRFENCKSTLVHMLNLYAQPSYMKHT 397
+ + Q Y ++E +KEN + S A++ V RFE S + + ++
Sbjct: 137 SELEGLGNNYQLYLTALEEWKENPNGSRALRDVRNRFEILDSLFTQYMPSFRVTNFEVPF 196
Query: 398 VLSYGSALALYVGLLREMMLAGATCGYSKAEIIDFQN 508
+ Y A L++ LLR+ + G G S + I ++ N
Sbjct: 197 LTVYTMAANLHLLLLRDASIFGEEWGLSTSTINNYYN 233
>sp|O53810|PG10_MYCTU Uncharacterized PE-PGRS family protein
PE_PGRS10 OS=Mycobacterium tuberculosis GN=PE_PGRS10
PE=3 SV=1
Length = 801
Score = 39.3 bits (90), Expect = 0.012
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGP--GRSDGGAEEGSHGLALRVGGQ 174
G G G + D+ G GA G A L+ G G G S+GGA G+ G GG
Sbjct: 162 GSGGAGGASTDVAGGAGGAGGAGGNAGMLFGAAGVGGVGGFSNGGATGGAGG----AGGA 217
Query: 175 TDQSGAGGERGRPGS 219
GAG ERG GS
Sbjct: 218 GGLFGAGRERGSGGS 232
>sp|A1SLK7|IF2_NOCSJ Translation initiation factor IF-2
OS=Nocardioides sp. (strain BAA-499 / JS614) GN=infB
PE=3 SV=1
Length = 938
Score = 39.3 bits (90), Expect = 0.012
Identities = 33/82 (40%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPRLGPGPGRSD----GGAEEGSHGLALRVGGQTDQSGAGGERG 207
G G G G A P A P G PGR GG G+ G GG SG G G
Sbjct: 233 GAGPGGRGPARPGA---PGRGGAPGRGGAPGRGGVGTGAPGRGGAPGGGFGPSGGGRPGG 289
Query: 208 -RPGSRL*RQHRPARPGLPSLR 270
RPG R Q RPG PS R
Sbjct: 290 GRPGQRGQTQGAFGRPGGPSRR 311
>sp|O18740|K1C9_CANFA Keratin, type I cytoskeletal 9 OS=Canis
familiaris GN=KRT9 PE=3 SV=1
Length = 786
Score = 38.5 bits (88), Expect = 0.021
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTD 180
GRG G S +G+G G+SG + G G G S GG GS+G GG +
Sbjct: 520 GRGGSGGSYGGGSGSGGGSSGSYGGGS----SSGGGSGGSHGGGSGGSYG-----GGSSS 570
Query: 181 QSGAGGERGRPGS 219
G+GG G GS
Sbjct: 571 GGGSGGRGGSGGS 583
Score = 31.2 bits (69), Expect = 3.4
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 100 GPGPGRSDGGAEEGSHGLALRVGGQTDQSGAGGERGRPGS 219
G G G S GG GS+G GG + G+GG G GS
Sbjct: 493 GGGSGGSHGGGSGGSYG-----GGSSSGGGSGGRGGSGGS 527
Score = 30.8 bits (68), Expect = 4.4
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGP--GPGRSDGGAEEGSHGLALRVGGQ 174
GRG S +G+G G G + R G G G GG GS+G GG
Sbjct: 686 GRGGSAGSYGGGSGSGGGRGGGCEEGSGSGGRSGGSYGGGSGSGGRSGGSYGGGSGSGGG 745
Query: 175 TDQSGAGGERGRPGS 219
+ S GG + GS
Sbjct: 746 SGGSYGGGSGSKGGS 760
Score = 30.4 bits (67), Expect = 5.7
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGP--GPGRSDGGAEEGSHGLALRVGGQ 174
GRG G S +G+G G G + R G G G GG S+G GG
Sbjct: 576 GRGGSGGSYGGGSGSGGGRGGGCEEGSGSGGRSGGSYGGGSGSGGGSSCSYG-----GGS 630
Query: 175 TDQSGAGGERG 207
+ G+GG G
Sbjct: 631 SSGGGSGGSYG 641
>sp|A4FM34|IF2_SACEN Translation initiation factor IF-2
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=infB PE=3 SV=1
Length = 1027
Score = 38.1 bits (87), Expect = 0.028
Identities = 33/94 (35%), Positives = 35/94 (37%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTDQSGAGGERGRPGS 219
G G G G P A G G G GG G G R GG + GA G GRPG
Sbjct: 345 GGGGGFRGGGGPGA------GAGTGAPAGGGFRGRPGGGGRPGGPGGRGGAAGAFGRPGG 398
Query: 220 RL*RQHRPARPGLPSLRRVLQRKCFLCCRPKGGG 321
PAR G S R+ Q P GG
Sbjct: 399 -------PARRGRKSKRQKRQEYMDNMQAPSVGG 425
Score = 33.1 bits (74), Expect = 0.89
Identities = 31/90 (34%), Positives = 34/90 (37%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTD 180
GRG G G G G GR P G G R GG G+ A GG
Sbjct: 322 GRGGPGGGGGGRPG-GGGGGGR--------PGGGGGGFRGGGGPGAGAGTGAPAGGGFRG 372
Query: 181 QSGAGGERGRPGSRL*RQHRPARPGLPSLR 270
+ G GG G PG R RPG P+ R
Sbjct: 373 RPGGGGRPGGPGGRGGAAGAFGRPGGPARR 402
Score = 32.3 bits (72), Expect = 1.5
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTDQSGAGGE 201
G G+GA + P R GPG G+ GG G G GG+ D+ G GG+
Sbjct: 222 GVGSGAPAQRPP------RPGPGGGQRQGGQGPGRGG---PQGGRPDRQGGGGQ 266
>sp|A0PQC4|IF2_MYCUA Translation initiation factor IF-2
OS=Mycobacterium ulcerans (strain Agy99) GN=infB PE=3
SV=1
Length = 945
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Frame = +1
Query: 16 GISRWDITGTGAGASGRALPAAFLWPRLG------PGPGRSDGGAEE---GSHGL-ALRV 165
G S ++ GASG P PR G PG GRSDGG G G+ A
Sbjct: 227 GASSGNMPPRPGGASGGPRPPRTGAPRPGGGRPGGPGGGRSDGGGGNYRGGGGGVGAAPG 286
Query: 166 GGQTDQSGAGGERGRPGSRL*RQHRPARPG 255
GG + G GG GRPG R RPG
Sbjct: 287 GGFRGRPGGGGGGGRPGQRGGAAGAFGRPG 316
>sp|P08123|CO1A2_HUMAN Collagen alpha-2(I) chain OS=Homo sapiens
GN=COL1A2 PE=1 SV=6
Length = 1366
Score = 38.1 bits (87), Expect = 0.028
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVG--GQ 174
G G +++D G G G P + PR GP PG + +G G A G GQ
Sbjct: 72 GLGGNFAAQYDGKGVGLGPG----PMGLMGPR-GP-PGAAGAPGPQGFQGPAGEPGEPGQ 125
Query: 175 TDQSGAGGERGRPGSRL*RQHRPARPGLPSLRRVL 279
T +GA G G PG + P +PG P R V+
Sbjct: 126 TGPAGARGPAGPPG-KAGEDGHPGKPGRPGERGVV 159
>sp|Q9S597|C27AA_BACUH Pesticidal crystal protein cry27Aa
OS=Bacillus thuringiensis subsp. higo GN=cry27Aa PE=2
SV=1
Length = 826
Score = 38.1 bits (87), Expect = 0.028
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Frame = +2
Query: 32 ISLGLGLVPAAGPFLQLFFGH---VWDLALADRTAAQKKAAMDSLFESVGKLISQALAES 202
+S+ GL+ G L G +W A D T + + ++ L+++ ++E
Sbjct: 92 VSVTAGLITVLGAGAALLAGITPLIWP-ATTDNT-------FNKITDATEVLLNKEISEF 143
Query: 203 VADQARAYNASIAQLGQDYRLSVESYKENASSVAVQKVV-VRFENCKSTLVHMLNLYAQP 379
V A S+ QL Y+ ++E++K+N + A + V RF+ + V + + P
Sbjct: 144 VRKTANTKIDSLQQLIYYYQNALENWKKNPNDSAARNTVSTRFQIVNAFFVEAMPALSMP 203
Query: 380 SYMKHTVLSYGSALALYVGLLRE-------------MMLAGATCGYSKAEIIDFQNDINE 520
Y + +Y A L++ LLRE M A Y E +D++N
Sbjct: 204 GYEVVQLGAYAQAANLHLILLREGIAYADQWNLARDPMHAAGDLHYK--EFLDYRNQYIN 261
Query: 521 HLESAY 538
H + Y
Sbjct: 262 HCSTWY 267
>sp|P70399|TP53B_MOUSE Tumor suppressor p53-binding protein 1 OS=Mus
musculus GN=Tp53bp1 PE=1 SV=2
Length = 1957
Score = 37.4 bits (85), Expect = 0.047
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWP-RLGPGPGRSDGGA----EEGSHGLALRV 165
GRGA + +G A+ ALP++ P +L P G S GA E+G GL +R
Sbjct: 1316 GRGAGPLKG---KASGTEAADFALPSSRGGPGKLSPRKGISQTGAPVCEEDGDAGLGIRQ 1372
Query: 166 GGQTDQSGAG-GERGRPGSR 222
GG+ + G G RGRP SR
Sbjct: 1373 GGKAPVTPRGRGRRGRPPSR 1392
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q4SDI2 |
| Definition |
tr|Q4SDI2|Q4SDI2_TETNG Chromosome 18 SCAF14637, whole genome shotgun sequence OS=Tetraodon nigroviridis |
| Align length |
115 |
| Score (bit) |
43.9 |
| E-value |
0.005 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962160|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_B22, 5'
(539 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q4SDI2|Q4SDI2_TETNG Chromosome 18 SCAF14637, whole genome sho... 44 0.005
tr|Q6BE03|Q6BE03_BACTU Cry protein OS=Bacillus thuringiensis GN=... 42 0.020
tr|O86651|O86651_STRCO Putative uncharacterized protein SCO5732 ... 40 0.060
tr|A9W913|A9W913_METEP Putative uncharacterized protein OS=Methy... 40 0.060
tr|Q2WEX2|Q2WEX2_RTRV Putative uncharacterized protein OS=Rana t... 40 0.078
tr|B5HES0|B5HES0_STRPR Translation initiation factor IF-2 OS=Str... 40 0.078
tr|Q05HZ3|Q05HZ3_XANOR Putative uncharacterized protein OS=Xanth... 40 0.10
tr|A5U0D3|A5U0D3_MYCTA PE-PGRS family protein OS=Mycobacterium t... 40 0.10
tr|A1QPH2|A1QPH2_MYCTF PE-PGRS family protein OS=Mycobacterium t... 40 0.10
tr|Q6WQT6|Q6WQT6_ORYSI Flowering time control protein isoform Os... 40 0.10
tr|Q6W5F4|Q6W5F4_ORYSI Flowering time control protein isoform Os... 40 0.10
tr|Q6K271|Q6K271_ORYSJ Flowering time control protein FCA gamma-... 40 0.10
tr|B8BCZ8|B8BCZ8_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.10
tr|B7NZY1|B7NZY1_BACTU Snun8-1 (Fragment) OS=Bacillus thuringien... 39 0.13
tr|Q8B968|Q8B968_9POTV Polyprotein OS=Sugarcane mosaic virus PE=... 39 0.17
tr|Q57Y65|Q57Y65_9TRYP Putative uncharacterized protein OS=Trypa... 39 0.17
tr|B4DN66|B4DN66_HUMAN cDNA FLJ56576, highly similar to Collagen... 39 0.17
tr|Q9DI99|Q9DI99_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXN5|Q8QXN5_9POTV Polyprotein OS=Sugarcane mosaic virus PE=... 39 0.23
tr|Q8QXN0|Q8QXN0_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXM9|Q8QXM9_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXM8|Q8QXM8_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXM7|Q8QXM7_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXM6|Q8QXM6_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q8QXM5|Q8QXM5_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q86893|Q86893_MDMV Polyprotein (Fragment) OS=Maize dwarf mosa... 39 0.23
tr|Q6Q098|Q6Q098_9POTV Polyprotein OS=Sugarcane mosaic virus PE=... 39 0.23
tr|Q6GUG7|Q6GUG7_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
tr|Q68YW0|Q68YW0_MDMV Coat protein (Fragment) OS=Maize dwarf mos... 39 0.23
tr|Q0GMF5|Q0GMF5_9POTV Polyprotein (Fragment) OS=Sugarcane mosai... 39 0.23
>tr|Q4SDI2|Q4SDI2_TETNG Chromosome 18 SCAF14637, whole genome
shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00020024001 PE=4 SV=1
Length = 324
Score = 43.9 bits (102), Expect = 0.005
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Frame = +1
Query: 4 RGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEG--SHGLALRVGGQT 177
RG +S W++ G G G G + L LG SD G G G A G +
Sbjct: 153 RGTSSVS-WELLGAGGGGEGERTRSDSLGSALGSERSDSDQGERRGYRPRGGAQPPDGPS 211
Query: 178 DQSGAG----GERG----RPGSRL*RQH----RPARPGLPSLRR---VLQRKCFL 297
SG G GERG R G R RQH RP +P P RR +LQR+ L
Sbjct: 212 RLSGRGGGGRGERGVLPRRAGQRKQRQHQRPGRPQQPAEPGQRRGLLLLQRQALL 266
>tr|Q6BE03|Q6BE03_BACTU Cry protein OS=Bacillus thuringiensis
GN=cry42Aa1 PE=4 SV=1
Length = 810
Score = 42.0 bits (97), Expect = 0.020
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Frame = +2
Query: 14 KGFQDGISLGLGLVP-AAGPF------LQLFFGHVWDLALADRTAAQKKAAMDSLFESVG 172
+G + I++ L L+ GPF L + F +W T AQ +A M + V
Sbjct: 65 EGLRTAITIALSLLSNLPGPFGYPAKLLSIIFPFLWPT----NTQAQWEAFM----KVVE 116
Query: 173 KLISQALAESVADQARAYNASIAQLGQDYRLSVESYKENASSVAVQKVVV-RFENCKSTL 349
+L+ Q + DQA I + Y+ +++ + +S +Q+ ++ +F + +
Sbjct: 117 ELVDQKIETFARDQAIQRLRGIQDVISLYQRDAKNFNDYPTSEPIQRQLLSQFTATNTFI 176
Query: 350 VHMLNLYAQPSYMKHTVLSYGSALALYVGLLREMMLAGATCGYSKAEIIDFQNDINEHL 526
V ++L+ + + ++ A L++ LLR+ ++ G + G + +QND N +
Sbjct: 177 VGSMSLFRVGRHEVPLLTTFVQAANLHLLLLRDAIMFGESWGMCPVTVAGYQNDFNNRI 235
>tr|O86651|O86651_STRCO Putative uncharacterized protein SCO5732
OS=Streptomyces coelicolor GN=SCO5732 PE=4 SV=1
Length = 517
Score = 40.4 bits (93), Expect = 0.060
Identities = 38/107 (35%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTD 180
GR + GI R + G G G GRA L P L G G S G GS LA + GG T
Sbjct: 374 GRPSGGIPRGTVIG-GQGPEGRAPMVRGLTPGLPGGTGGSGQGGTIGSRRLASQTGGMT- 431
Query: 181 QSGAGGERGRPGSRL*RQHRPARPGLPSLRRVLQR-KCFLCCRPKGG 318
G+ GR + R P GLP Q + + RP GG
Sbjct: 432 -GAVAGQNGR--LPMGRPMTPGGTGLPRPASSSQSPRAAVLGRPTGG 475
>tr|A9W913|A9W913_METEP Putative uncharacterized protein
OS=Methylobacterium extorquens (strain PA1) GN=Mext_4684
PE=4 SV=1
Length = 217
Score = 40.4 bits (93), Expect = 0.060
Identities = 28/77 (36%), Positives = 35/77 (45%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTDQSGAGGERGRPGS 219
G G GA+G A R G G GGA + GG++ + GGE G PG+
Sbjct: 12 GVGGGAAGGA--------RGGAGEAGGAGGARGAADVGGAARGGESGGAARGGEAGEPGA 63
Query: 220 RL*RQHRPARPGLPSLR 270
R R+ PAR PS R
Sbjct: 64 RGGREGGPARAEQPSER 80
>tr|Q2WEX2|Q2WEX2_RTRV Putative uncharacterized protein OS=Rana
tigrina ranavirus PE=4 SV=1
Length = 100
Score = 40.0 bits (92), Expect = 0.078
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 207 PTRLAPITPASPSSARTTVSPSSPTKKMLPLLPS 308
PT L P+TP++PS+ T ++PS+P+ + PL PS
Sbjct: 35 PTPLTPLTPSTPSTPLTPLTPSTPSTPLTPLTPS 68
>tr|B5HES0|B5HES0_STRPR Translation initiation factor IF-2
OS=Streptomyces pristinaespiralis ATCC 25486
GN=SSDG_03717 PE=4 SV=1
Length = 760
Score = 40.0 bits (92), Expect = 0.078
Identities = 30/76 (39%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPRLGPG----PGRSDGGAEEGSHGLALRVGGQTDQSGAGGERG 207
G G GA G P P G G PG GG G G A R GG G GG G
Sbjct: 44 GRGPGAGGAGRPGGAGRPGGGGGFAGRPGGGGGGRPGGGGGFAGRPGGGGPGGGGGGFGG 103
Query: 208 RPGSRL*RQHRPARPG 255
RPG RP PG
Sbjct: 104 RPGF----GGRPGGPG 115
Score = 34.7 bits (78), Expect = 3.3
Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +1
Query: 40 GTGAGASGRALPAAFLWPR---LGPGPGRSDGGAEEG-SHGLALRVGGQTDQSGAGGERG 207
G GA G P + P+ GP PG GG G G A R GG G GG G
Sbjct: 10 GGPGGAPGGNRPNPGMMPQRPAAGPRPGGGPGGGGRGPGAGGAGRPGGAGRPGGGGGFAG 69
Query: 208 RPG 216
RPG
Sbjct: 70 RPG 72
Score = 33.1 bits (74), Expect = 9.5
Identities = 26/76 (34%), Positives = 28/76 (36%)
Frame = +1
Query: 46 GAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTDQSGAGGERGRPGSRL 225
G G GR R G G GG G G R GG + G G GRPG
Sbjct: 72 GGGGGGRPGGGGGFAGRPGGGGPGGGGGGFGGRPGFGGRPGGPGGRGGTQGAFGRPGG-- 129
Query: 226 *RQHRPARPGLPSLRR 273
PAR G S R+
Sbjct: 130 -----PARRGRKSKRQ 140
>tr|Q05HZ3|Q05HZ3_XANOR Putative uncharacterized protein
OS=Xanthomonas oryzae pv. oryzae GN=XOO4801 PE=4 SV=1
Length = 204
Score = 39.7 bits (91), Expect = 0.10
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 25 RWDITGTGAGASGRALPAAFLWPRLGPGPG-----RSDGGAEEGSHGLALRVGGQTDQSG 189
RW G G GA+ A WP GPG G R GA +G+ +A V G +SG
Sbjct: 18 RWRQAGAGDGAAAVAGAVPGPWPDPGPGGGHRQQWRRQAGAGDGAAAVAGAVPGPWPESG 77
Query: 190 AGGERGRP 213
GG +P
Sbjct: 78 PGGGHRQP 85
>tr|A5U0D3|A5U0D3_MYCTA PE-PGRS family protein OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_0755
PE=4 SV=1
Length = 801
Score = 39.7 bits (91), Expect = 0.10
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGP--GRSDGGAEEGSHGLALRVGGQ 174
G G G + D+ G GA G A L+ G G G S+GGA G+ G GG
Sbjct: 162 GSGGAGGASTDVAGGAGGAGGAGGNAGMLFGAAGVGGVGGFSNGGATGGAGG----AGGA 217
Query: 175 TDQSGAGGERGRPGS 219
GAGGE G GS
Sbjct: 218 GGLFGAGGEGGSGGS 232
>tr|A1QPH2|A1QPH2_MYCTF PE-PGRS family protein OS=Mycobacterium
tuberculosis (strain F11) GN=TBFG_00749 PE=4 SV=1
Length = 801
Score = 39.7 bits (91), Expect = 0.10
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGP--GRSDGGAEEGSHGLALRVGGQ 174
G G G + D+ G GA G A L+ G G G S+GGA G+ G GG
Sbjct: 162 GSGGAGGASTDVAGGAGGAGGAGGNAGMLFGAAGVGGVGGFSNGGATGGAGG----AGGA 217
Query: 175 TDQSGAGGERGRPGS 219
GAGGE G GS
Sbjct: 218 GGLFGAGGEGGSGGS 232
>tr|Q6WQT6|Q6WQT6_ORYSI Flowering time control protein isoform
OsFCA-1 OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 738
Score = 39.7 bits (91), Expect = 0.10
Identities = 32/80 (40%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +1
Query: 1 GRGAEGISRWDITGTGAGASGRALPAAFLWPRLGPGPGRSDGGAEEGSHGLALRVGGQTD 180
GR G SRW +G G G SG P F G G G DGG G G G +D
Sbjct: 25 GRFGRGPSRWS-SGGGGGGSGSP-PHRF---SRGGGGGGGDGGGGGGGGGRFHPYRGPSD 79
Query: 181 Q-------SGAGGERGRPGS 219
SG GGE G PGS
Sbjct: 80 HSGGGGYRSGGGGEYGEPGS 99
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