DK962215 |
Clone id |
TST39A01NGRL0013_E06 |
Library |
TST39 |
Length |
599 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_E06. 5' end sequence. |
Accession |
DK962215 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3708Contig1 |
Sequence |
GTCGGCGTCGCCATGGATTTTTCGGGTTGCAGCAAGTCCGCGCTGATTTGGGCTCTGAAA AACATCGTCAAGGACGGGGATCACCTCATTTTGGTGGCTGTAGTCAAGAAGCACAACGAG GAGGGTGAAATGCACCTCTGGGAGGACAGTGGATCTCCGCTAATGCCGCTTGAAGAATTT GCAAGCAGTCTAGGCAAGTATGGGATTGAGCAAGATGCCGAACTTTTGAGTTTGCTACAG AAGGAGGCTCGACAGAAGGAGCTCGTCGTCGTCTTTAAGGTGTACTGGGGTGATGCGAGG GAGAAGATATGTGATGCTGTAGTAGATCTGCCCTTGGATTGCATCGTTATGGGCAATAGG GGACTGGGGACACTGAAGAGGGCAGTTCTTGGCAGTGTTAGCAATTATGTTGTAAACAAT GCGCCGCGTCCAGTCACTGTAGTAAAGTTACCAGCTGATGTGATGTGAGTTGTTAGTGAT GGTGTGATCACTCGACTCGGAGATGTTTCTGTGGTCCTTACGTACATGCTCATTTGAGCA TCTTTTGTTTTGTAGTGGACACATTAATACGTTTGGCAGGAATTGTGAAAGGACCCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P87132 |
Definition |
sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe |
Align length |
147 |
Score (bit) |
53.5 |
E-value |
8.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q8P6 |
Definition |
tr|A7Q8P6|A7Q8P6_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
152 |
Score (bit) |
202.0 |
E-value |
9.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962215|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_E06, 5' (599 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q8P6|A7Q8P6_VITVI Chromosome chr5 scaffold_64, whole genome... 202 9e-51 tr|A9PIB2|A9PIB2_POPTR Putative uncharacterized protein OS=Popul... 190 6e-47 tr|A1YMW5|A1YMW5_BRACM Putative uncharacterized protein OS=Brass... 182 1e-44 tr|Q9LSP5|Q9LSP5_ARATH Gb|AAF26101.1 (AT3g17020/K14A17_14) OS=Ar... 181 4e-44 tr|A2Q2X4|A2Q2X4_MEDTR Universal stress protein (Usp) OS=Medicag... 177 5e-43 tr|A9NWU4|A9NWU4_PICSI Putative uncharacterized protein OS=Picea... 174 5e-42 tr|Q75M01|Q75M01_ORYSJ Os05g0157200 protein OS=Oryza sativa subs... 172 1e-41 tr|B8AYD2|B8AYD2_ORYSI Putative uncharacterized protein OS=Oryza... 172 2e-41 tr|A9NQ10|A9NQ10_PICSI Putative uncharacterized protein OS=Picea... 172 2e-41 tr|A9NPB4|A9NPB4_PICSI Putative uncharacterized protein OS=Picea... 169 1e-40 tr|Q7XXS5|Q7XXS5_ORYSJ Os05g0453700 protein OS=Oryza sativa subs... 168 3e-40 tr|B8AYT1|B8AYT1_ORYSI Putative uncharacterized protein OS=Oryza... 168 3e-40 tr|B6TC12|B6TC12_MAIZE USP family protein OS=Zea mays PE=2 SV=1 166 1e-39 tr|B4FN17|B4FN17_MAIZE Putative uncharacterized protein OS=Zea m... 166 1e-39 tr|B5UB77|B5UB77_HORBU Universal stress protein OS=Hordeum bulbo... 166 1e-39 tr|Q6ZHE6|Q6ZHE6_ORYSJ Os02g0773200 protein OS=Oryza sativa subs... 164 3e-39 tr|B8AJJ4|B8AJJ4_ORYSI Putative uncharacterized protein OS=Oryza... 164 3e-39 tr|Q2TN84|Q2TN84_WHEAT USP family protein OS=Triticum aestivum P... 163 8e-39 tr|B4FH47|B4FH47_MAIZE Putative uncharacterized protein OS=Zea m... 162 1e-38 tr|B7FH14|B7FH14_MEDTR Putative uncharacterized protein OS=Medic... 162 1e-38 tr|B7FGP5|B7FGP5_MEDTR Putative uncharacterized protein OS=Medic... 162 1e-38 tr|B6TYX3|B6TYX3_MAIZE USP family protein OS=Zea mays PE=2 SV=1 160 5e-38 tr|B4G087|B4G087_MAIZE Putative uncharacterized protein OS=Zea m... 160 5e-38 tr|B4FFW5|B4FFW5_MAIZE Putative uncharacterized protein OS=Zea m... 160 5e-38 tr|B0YQX0|B0YQX0_GOSAR Universal stress protein 1 OS=Gossypium a... 159 1e-37 tr|A9PHM7|A9PHM7_POPTR Putative uncharacterized protein OS=Popul... 159 2e-37 tr|A5C9Q0|A5C9Q0_VITVI Putative uncharacterized protein OS=Vitis... 158 2e-37 tr|A3B4N7|A3B4N7_ORYSJ Putative uncharacterized protein OS=Oryza... 158 2e-37 tr|Q9M9P5|Q9M9P5_ARATH T17B22.4 protein OS=Arabidopsis thaliana ... 157 6e-37 tr|A7PTR6|A7PTR6_VITVI Chromosome undetermined scaffold_30, whol... 157 6e-37
>tr|A7Q8P6|A7Q8P6_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033132001 PE=4 SV=1 Length = 165
Score = 202 bits (515), Expect = 9e-51 Identities = 98/152 (64%), Positives = 124/152 (81%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKK-HNEEGEMHLWEDSGSPLMPLEE 177 VGVA+DFS CSK AL WAL N+V+DGDHLI+++V+ + H EEGEM LWE +GSPL+PL E Sbjct: 7 VGVAVDFSACSKKALKWALDNVVRDGDHLIILSVLPEGHYEEGEMQLWETTGSPLIPLSE 66
Query: 178 FASSL--GKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F+ + KYG++ DAE L ++ ARQK++VVV KVYWGDAREKIC+A+ ++PL C+V+ Sbjct: 67 FSDPIISKKYGVKPDAETLDIVNCVARQKDIVVVMKVYWGDAREKICEAIDNIPLSCLVI 126
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 GNRGLG +KRA+LGSVSNYVVNN PVTVVK Sbjct: 127 GNRGLGKIKRAILGSVSNYVVNNGSCPVTVVK 158
>tr|A9PIB2|A9PIB2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 164
Score = 190 bits (482), Expect = 6e-47 Identities = 91/152 (59%), Positives = 118/152 (77%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKK-HNEEGEMHLWEDSGSPLMPLEE 177 VGVA+DFS CS+ AL WA NI++DGDHL+LV V + + E+GEM LWE +GSP++PL E Sbjct: 7 VGVAVDFSSCSRKALKWAADNIIRDGDHLVLVIVQPEGYYEDGEMQLWEVTGSPMIPLSE 66
Query: 178 FAS--SLGKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F+ ++ KYG++ D E L LL A QKE+VVV K+YWGD REKIC+A+ +PL C+V+ Sbjct: 67 FSDPVTMKKYGLKPDPETLDLLNTVAHQKEIVVVLKIYWGDPREKICEAIDKIPLSCLVI 126
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 GNRGLG +KRA++GSVSNYVVNN P+TVVK Sbjct: 127 GNRGLGKVKRAIMGSVSNYVVNNGSCPITVVK 158
>tr|A1YMW5|A1YMW5_BRACM Putative uncharacterized protein OS=Brassica campestris PE=2 SV=1 Length = 163
Score = 182 bits (463), Expect = 1e-44 Identities = 89/152 (58%), Positives = 113/152 (74%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKK-HNEEGEMHLWEDSGSPLMPLEE 177 +GVA+DFS CSK AL WA++N+ +DGD+LIL+ V H E+GEM LWE GSPL+PL E Sbjct: 9 IGVAVDFSECSKKALNWAIENVARDGDYLILITVAHDMHYEDGEMQLWETVGSPLIPLSE 68
Query: 178 F--ASSLGKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F A+ + KYG++ DAE L + ARQK + VV K+YWGD REKIC+A +PL +V+ Sbjct: 69 FSEAAVMKKYGVKPDAETLDIANTAARQKSITVVMKIYWGDPREKICEAAEHIPLSSLVI 128
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 GNRGLG LKR ++GSVSN+VVNN PVTVVK Sbjct: 129 GNRGLGGLKRMIMGSVSNHVVNNVACPVTVVK 160
>tr|Q9LSP5|Q9LSP5_ARATH Gb|AAF26101.1 (AT3g17020/K14A17_14) OS=Arabidopsis thaliana GN=At3g17020 PE=2 SV=1 Length = 163
Score = 181 bits (458), Expect = 4e-44 Identities = 88/152 (57%), Positives = 111/152 (73%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKKHN-EEGEMHLWEDSGSPLMPLEE 177 +GVA+DFS CSK AL WA+ N+V+DGDHLIL+ + N EEGEM LWE GSP +P+ E Sbjct: 9 IGVAVDFSDCSKKALSWAIDNVVRDGDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSE 68
Query: 178 F--ASSLGKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F A+ + KY ++ DAE L ++ AR+K + VV K+YWGD REKIC A +PL +VM Sbjct: 69 FSDAAVMKKYALKPDAETLDIVNTAARKKTITVVMKIYWGDPREKICAAAEQIPLSSLVM 128
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 GNRGLG LKR ++GSVSN+VVNN PVTVVK Sbjct: 129 GNRGLGGLKRMIMGSVSNHVVNNVACPVTVVK 160
>tr|A2Q2X4|A2Q2X4_MEDTR Universal stress protein (Usp) OS=Medicago truncatula GN=MtrDRAFT_AC152185g28v2 PE=4 SV=1 Length = 163
Score = 177 bits (448), Expect = 5e-43 Identities = 88/151 (58%), Positives = 112/151 (74%), Gaps = 2/151 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKKHNEEGEMHLWEDSGSPLMPLEEF 180 +G+AMDFS CS A W + NIVK+GD+LIL+ + + E GEM LWE +GSPL PL EF Sbjct: 7 LGIAMDFSPCSIKAFQWTVDNIVKEGDNLILIIIRPEEYEHGEMQLWEVTGSPLTPLGEF 66
Query: 181 ASS--LGKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVMG 354 +S KY I+ D E+L + QK++VV+ KVYWGDAREK+C+A+ +PLD + MG Sbjct: 67 INSDLPKKYEIKTDPEVLKIATTAIEQKKVVVLVKVYWGDAREKLCEAIEQVPLDGLTMG 126
Query: 355 NRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 NRGLGTL+RA++GSVSNYVVNNA PVTVVK Sbjct: 127 NRGLGTLRRAIMGSVSNYVVNNASCPVTVVK 157
>tr|A9NWU4|A9NWU4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 163
Score = 174 bits (440), Expect = 5e-42 Identities = 85/152 (55%), Positives = 117/152 (76%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKKHN-EEGEMHLWEDSGSPLMPLEE 177 VGVAMD S CS+ AL WA+++++++GD L+++ V EEG LWED+GSP +PL E Sbjct: 6 VGVAMDMSECSRGALKWAVESLLREGDCLVIINVQGSVTYEEGHSQLWEDTGSPFIPLIE 65
Query: 178 FA--SSLGKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 + S+ +YG++ D + L +L+ A++K++VVV K+YWGD REK+CDAV LPL+C+V+ Sbjct: 66 YEDPSTTKRYGVKADPKTLEILKYAAKEKKVVVVAKIYWGDPREKLCDAVGKLPLNCLVV 125
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 GNRGLG +KRA+LGSVSNYVVNNA PVTVVK Sbjct: 126 GNRGLGKIKRAILGSVSNYVVNNASCPVTVVK 157
>tr|Q75M01|Q75M01_ORYSJ Os05g0157200 protein OS=Oryza sativa subsp. japonica GN=P0676G05.12 PE=2 SV=1 Length = 167
Score = 172 bits (436), Expect = 1e-41 Identities = 88/152 (57%), Positives = 115/152 (75%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKKHN-EEGEMHLWEDSGSPLMPLEE 177 VG A+DFS S++AL WA N+++ GDHLIL+ V+K + E+GE LWE +GSPL+PL + Sbjct: 12 VGAAVDFSEGSRAALRWAADNLLRAGDHLILLHVLKDPDYEQGETLLWEATGSPLIPLSD 71
Query: 178 FASSL--GKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F+ KYG + DAE L +L ARQKE+VVVFKV WGD REK+C A+ ++P+ C+V+ Sbjct: 72 FSEPTIAKKYGAKPDAETLDMLNTVARQKEVVVVFKVLWGDPREKLCQAINEIPMSCLVI 131
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 G+RGLG LKR +LGSVS+YVVNNA PVTVVK Sbjct: 132 GSRGLGKLKRVLLGSVSDYVVNNATCPVTVVK 163
>tr|B8AYD2|B8AYD2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18538 PE=4 SV=1 Length = 169
Score = 172 bits (435), Expect = 2e-41 Identities = 88/152 (57%), Positives = 114/152 (75%), Gaps = 3/152 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVKKHN-EEGEMHLWEDSGSPLMPLEE 177 VG A+DFS S+ AL WA N+++ GDHLIL+ V+K + E+GE LWE +GSPL+PL + Sbjct: 14 VGAAVDFSEGSRGALRWAADNLLRAGDHLILLHVLKDPDYEQGETLLWEATGSPLIPLSD 73
Query: 178 FASSL--GKYGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F+ KYG + DAE L +L ARQKE+VVVFKV WGD REK+C A+ ++P+ C+V+ Sbjct: 74 FSEPTIAKKYGAKPDAETLDMLNTVARQKEVVVVFKVLWGDPREKLCQAINEIPMSCLVI 133
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVK 447 G+RGLG LKR +LGSVS+YVVNNA PVTVVK Sbjct: 134 GSRGLGKLKRVLLGSVSDYVVNNATCPVTVVK 165
>tr|A9NQ10|A9NQ10_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 164
Score = 172 bits (435), Expect = 2e-41 Identities = 90/154 (58%), Positives = 114/154 (74%), Gaps = 3/154 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVK-KHNEEGEMHLWEDSGSPLMPLEE 177 +G+A+D+S SKSAL WAL N+ +GD ++++ V + K +E G+ LWE SGSPL+PL E Sbjct: 7 IGIAVDYSPSSKSALKWALDNLADEGDRVVVIHVNQNKASESGQSQLWEKSGSPLIPLAE 66
Query: 178 FAS-SLGK-YGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F +L K Y + DAE+L +L RQKEL V+ KVYWGDAREK+CDAV DL LD +VM Sbjct: 67 FREGNLSKHYELTPDAEVLDMLDTATRQKELEVIAKVYWGDAREKLCDAVEDLKLDSLVM 126
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVKLP 453 G+RGLG LKR LGSVSNYV++NA PVTVVK P Sbjct: 127 GSRGLGQLKRVFLGSVSNYVISNASCPVTVVKEP 160
>tr|A9NPB4|A9NPB4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 164
Score = 169 bits (428), Expect = 1e-40 Identities = 88/154 (57%), Positives = 113/154 (73%), Gaps = 3/154 (1%) Frame = +1
Query: 1 VGVAMDFSGCSKSALIWALKNIVKDGDHLILVAVVK-KHNEEGEMHLWEDSGSPLMPLEE 177 +G+A+D+S SKSAL WAL N+ GD ++++ + + K E G+ LW+ +GSPL+PL E Sbjct: 7 IGIAVDYSPSSKSALKWALDNLADKGDRVVVIHINQNKEPESGQSQLWDKAGSPLIPLAE 66
Query: 178 FAS-SLGK-YGIEQDAELLSLLQKEARQKELVVVFKVYWGDAREKICDAVVDLPLDCIVM 351 F +L K Y + DAE+L +L ARQKEL V+ KVYWGDAREK+CDAV DL LD +VM Sbjct: 67 FREGNLSKHYELNPDAEVLDMLDTAARQKELEVIAKVYWGDAREKLCDAVEDLKLDSLVM 126
Query: 352 GNRGLGTLKRAVLGSVSNYVVNNAPRPVTVVKLP 453 G+RGLG LKR LGSVSNYV++NA PVTVVK P Sbjct: 127 GSRGLGQLKRVFLGSVSNYVISNANCPVTVVKEP 160
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