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NBDC - LSDB Archive
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DK962229
Clone id TST39A01NGRL0013_E20
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_E20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACATAGCACCTACTGCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTATGG
TGTCCGCCTGCTTCTCTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCACTA
GGCCAGAGGGGCGTTTAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGT
TCGAGCTTCGCATGCTCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATG
GTGTGGTTGGGCAAGCTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCT
CCTCAGACGAAGATGAGCGCGAAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGG
ACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGA
GCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTG
AGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCT
CTGTAGAGGACTGTAATACTGCCATTGAGGAGCTAGACGGGGCTGATTATGCTGGAAGGA
■■Homology search results ■■ -
sp_hit_id P28644
Definition sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea
Align length 82
Score (bit) 87.8
E-value 4.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962229|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_E20, 5'
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    88   4e-17
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    87   6e-17
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    87   6e-17
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    87   8e-17
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    84   7e-16
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    83   1e-15
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    82   3e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    80   6e-15
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    80   8e-15
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    80   1e-14
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    77   9e-14
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    76   1e-13
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    68   4e-11
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    67   7e-11
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    66   2e-10
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    66   2e-10
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    66   2e-10
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    65   3e-10
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    65   3e-10
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    65   3e-10
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    65   3e-10
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    65   3e-10
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    64   4e-10
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    64   4e-10
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    64   6e-10
sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|P33240|CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit...    63   1e-09
sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit...    62   2e-09
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    62   2e-09

>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +3

Query: 360 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 533
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 534 MSSVEDCNTAIEELDGADYAGR 599
           MS+VE+   A+E L+G D  GR
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGR 124



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = +3

Query: 381 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 560
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 561 AIEELDGADYAGR 599
           AI  LDG    GR
Sbjct: 206 AIAALDGQTLDGR 218


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 549 DCNTAIEELDGADYAGR 599
           +   A ++ +G +  GR
Sbjct: 140 EVEAAEQQFNGYEIDGR 156



 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
 Frame = +3

Query: 357 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 512
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 513 RGFGFVTMSSVEDCNTAIEELDGADYAGR 599
           RGFGFVT SS ++ N AI+ L+G D  GR
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGR 276


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
 Frame = +3

Query: 354 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 524
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 525 FVTMSSVEDCNTAIEELDGADYAGR 599
           FVTMSSV +   A ++ +G +  GR
Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGR 160



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 37/86 (43%), Positives = 50/86 (58%)
 Frame = +3

Query: 342 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 521
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 522 GFVTMSSVEDCNTAIEELDGADYAGR 599
           GFVT  S ++   AI+ LDGAD  GR
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGR 273


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 86.7 bits (213), Expect = 8e-17
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 549 DCNTAIEELDGADYAGR 599
           +   A ++ +G +  GR
Sbjct: 141 EVEAAEQQFNGYEIDGR 157



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
 Frame = +3

Query: 357 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 512
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 513 RGFGFVTMSSVEDCNTAIEELDGADYAGR 599
           RGFGFVT SS ++ N AI+ L+G D  GR
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGR 277


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 83.6 bits (205), Expect = 7e-16
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 573 LDGADYAGR 599
            +G +  GR
Sbjct: 148 FNGYELDGR 156



 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +3

Query: 381 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 560
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 561 AIEELDGADYAGR 599
           AIE LDG D  GR
Sbjct: 245 AIESLDGVDLNGR 257


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 37/74 (50%), Positives = 54/74 (72%)
 Frame = +3

Query: 378 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 557
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 558 TAIEELDGADYAGR 599
             IE+L+  +  GR
Sbjct: 140 AVIEKLNDTEIGGR 153



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 27/75 (36%), Positives = 41/75 (54%)
 Frame = +3

Query: 375 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 554
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 555 NTAIEELDGADYAGR 599
             AI+ L+ +   G+
Sbjct: 239 EAAIQALNNSVLEGQ 253


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +3

Query: 351 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 506
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 507 RSRGFGFVTMSSVEDCNTAIEELDGADYAGR 599
           RSRGFGFVT SS E+ N AIE LDG D  GR
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGR 263



 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 38/69 (55%), Positives = 53/69 (76%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 573 LDGADYAGR 599
            +G +  GR
Sbjct: 148 FNGYELDGR 156


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 37/70 (52%), Positives = 55/70 (78%)
 Frame = +3

Query: 390 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 569
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 570 ELDGADYAGR 599
           + +  D  GR
Sbjct: 210 KFNRYDLNGR 219



 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 540 SVEDCNTAIEELDGADYAGR 599
            V++ N AI  LDG +  GR
Sbjct: 294 DVDELNEAISALDGQNLEGR 313


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 80.1 bits (196), Expect = 8e-15
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = +3

Query: 390 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 569
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156

Query: 570 ELDGADYAGR 599
                D  GR
Sbjct: 157 LYSQYDLNGR 166



 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 36/80 (45%), Positives = 48/80 (60%)
 Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 540 SVEDCNTAIEELDGADYAGR 599
           S  + + AI  LDG    GR
Sbjct: 241 SEAEMSEAIANLDGQTLDGR 260


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 36/69 (52%), Positives = 53/69 (76%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 573 LDGADYAGR 599
            +G ++ GR
Sbjct: 160 FNGYEFEGR 168



 Score = 73.9 bits (180), Expect = 6e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 573 LDGADYAGR 599
           L+GAD  GR
Sbjct: 318 LNGADLDGR 326
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 69
Score (bit) 104.0
E-value 4.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962229|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_E20, 5'
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...   104   4e-21
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...   103   1e-20
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...   100   8e-20
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...    97   9e-19
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...    96   1e-18
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...    96   2e-18
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       94   8e-18
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    92   2e-17
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    92   2e-17
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    92   2e-17
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    92   2e-17
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    92   3e-17
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    92   3e-17
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    91   4e-17
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       91   5e-17
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    91   5e-17
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    90   9e-17
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    90   9e-17
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    90   9e-17
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    90   1e-16
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    90   1e-16
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    89   1e-16
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    87   7e-16
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    87   7e-16
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    87   1e-15
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    86   1e-15
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    86   1e-15
tr|Q9ZUJ3|Q9ZUJ3_ARATH T2K10.5 protein (Nucleic acid-binding pro...    85   4e-15
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    85   4e-15
tr|B0M184|B0M184_MESCR Chloroplast RNA binding protein OS=Mesemb...    84   6e-15

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score =  104 bits (259), Expect = 4e-21
 Identities = 46/69 (66%), Positives = 57/69 (82%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 573 LDGADYAGR 599
           LDG++Y GR
Sbjct: 127 LDGSEYGGR 135



 Score = 47.0 bits (110), Expect = 8e-04
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 506
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score =  103 bits (256), Expect = 1e-20
 Identities = 45/69 (65%), Positives = 58/69 (84%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 573 LDGADYAGR 599
           LDG++Y GR
Sbjct: 172 LDGSEYGGR 180



 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 549 DCNTAIEELDGADYAGR 599
           + +TA+E L+G +  GR
Sbjct: 255 EMDTALESLNGVELEGR 271


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score =  100 bits (248), Expect = 8e-20
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE 
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 573 LDGADYAGR 599
           LDG D  GR
Sbjct: 61  LDGHDVGGR 69



 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 35/69 (50%), Positives = 47/69 (68%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 573 LDGADYAGR 599
           LDGA++ GR
Sbjct: 168 LDGAEFDGR 176


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score = 96.7 bits (239), Expect = 9e-19
 Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +3

Query: 345 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 518
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 519 FGFVTMSSVEDCNTAIEELDGADYAGR 599
           F FVTM++V+DC   I+ LDG+ Y GR
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGSLYGGR 185



 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = +3

Query: 351 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 518
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 519 FGFVTMSSVEDCNTAIEELDGADYAGR 599
           +GFV  S+ E+ + A+  L+G +  GR
Sbjct: 250 YGFVCYSTREEMDEALSSLNGMEMEGR 276


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 573 LDGADYAGR 599
           LDG+ Y GR
Sbjct: 168 LDGSQYMGR 176



 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 549 DCNTAIEELDGADYAGR 599
           +  TA++ L+G +  GR
Sbjct: 251 ELETALQSLNGVELEGR 267


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
           vulgaris GN=RNP1 PE=2 SV=1
          Length = 287

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY GNLP+S +S +LAG+ Q  GS +++EV+YD+++G+SRGF FVTMS +EDCN  IE 
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 573 LDGADYAGR 599
           LDG +Y GR
Sbjct: 174 LDGKEYLGR 182



 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P + E+  KL+VGNL WS  +E L   FQ+ G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 549 DCNTAIEELDGADYAGR 599
           +   A+  L+  +  GR
Sbjct: 257 EMEAALGALNDVELEGR 273


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 93.6 bits (231), Expect = 8e-18
 Identities = 44/80 (55%), Positives = 61/80 (76%)
 Frame = +3

Query: 360 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 540 SVEDCNTAIEELDGADYAGR 599
           S E+   A+E+ +G  + GR
Sbjct: 129 SAEEAEAAVEQFNGYAFQGR 148



 Score = 80.1 bits (196), Expect = 9e-14
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +3

Query: 366 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 545
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 546 EDCNTAIEELDGADYAGR 599
           ++ N AI  LDG D  GR
Sbjct: 236 QEVNNAISNLDGIDLDGR 253


>tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 285

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 43/80 (53%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
 Frame = +3

Query: 378 GESVA------KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 539
           GE+VA      KLY GNLP+S +S  LAG+ ++ GS +++EV+YD+++G+SRGF FVTMS
Sbjct: 103 GETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMS 162

Query: 540 SVEDCNTAIEELDGADYAGR 599
            VEDCN  I+ LDG ++ GR
Sbjct: 163 CVEDCNAVIQNLDGKEFMGR 182



 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 31/77 (40%), Positives = 50/77 (64%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P + E+  KL+VGNL W+  SE L   FQ+ G+V    V++D E+G+SRG+GFV+ ++  
Sbjct: 197 PLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKS 256

Query: 549 DCNTAIEELDGADYAGR 599
           + +TA+  +D  +  GR
Sbjct: 257 EMDTALAIMDNVELEGR 273


>tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subsp.
           japonica GN=P0643F09.1 PE=2 SV=1
          Length = 316

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           KLY GNLP++C+S +LAG+ Q   + +MVEV+YD+ +GRSRGF FVTMS++EDC   I+ 
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205

Query: 573 LDGADYAGR 599
           LDG+ Y+GR
Sbjct: 206 LDGSLYSGR 214



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +3

Query: 369 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 548
           P + E+  KL+VGNL W+  SE L  +FQK G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 229 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 288

Query: 549 DCNTAIEELDGADYAGR 599
           + + A+  L+G +  GR
Sbjct: 289 EMDEALSSLNGTELEGR 305


>tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 205

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 40/69 (57%), Positives = 58/69 (84%)
 Frame = +3

Query: 393 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEE 572
           K++VGNLP+S +S +LAG+F++ GSV+MVEV+YD+++GRSRGFGFVTMS+ E+   AIE+
Sbjct: 22  KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81

Query: 573 LDGADYAGR 599
            +G  + GR
Sbjct: 82  FNGYTFQGR 90



 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 43/81 (53%), Positives = 52/81 (64%)
 Frame = +3

Query: 357 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 536
           R  G  F +S  KLYVGNL W  ++  L  +F + G+V   +VIYD+ESGRSRGFGFVT 
Sbjct: 111 RGGGSNF-DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTY 169

Query: 537 SSVEDCNTAIEELDGADYAGR 599
            S E+ N AI  LDG D  GR
Sbjct: 170 GSAEEVNNAISNLDGVDLDGR 190