DK962236 |
Clone id |
TST39A01NGRL0013_F03 |
Library |
TST39 |
Length |
613 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_F03. 5' end sequence. |
Accession |
DK962236 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL539Contig1 |
Sequence |
AAAGAATGTATTCTGCGGAGTTTTTTAACAGATGTAACATAACACTTCCAGATGCTCTTC TTCAAGGAGCTGGTCGTAGTCATGGAGGCAGATTCATACTTGCAAAATCAAGGGATGATG ATTCTTATAGACTGCCTTTGTCAAAGAGTATGCATCTGAGGCATTTAAAAGATTCTCCAA GGACCTCTTTAAGGAAAAGTAAAGGTATAATGAGGTCAGTAGCTAGTGTATCATCTGCTG AGGACTCTGCAAATACGGAATATCTGGAGAACCAGCCCAAAGAAGGTGCCTCGGGGTTGT ATTTTGGGCAGCCAACACAAAAGGAGGAGGTGATCGCTATACGTGAAAGTGCTGTACGAG CAAGTCTTATGAAGAAGCTAAGTGACATCAATCTTTATGGGCGCCATCTGCAAAGACAGT TACGTGAAAAGGAAGATGCCTTATTGAAGTGCAAAAGTGAACTGGAAACCATGGAGTCTG ATATCCAGATCCTTGCAAGGTTGGCTCAAGAAATTGCAAAAGATGGTGTAAAGCCAGGCA CAAGGCAAATTGATGGAAAGTACATCCAGTCTCACGTCGCTTTAAAGCTGGAGGAGCTGC AAGAGCGTTTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3V6T2 |
Definition |
sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens |
Align length |
58 |
Score (bit) |
38.1 |
E-value |
0.036 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PRC0 |
Definition |
tr|A7PRC0|A7PRC0_VITVI Chromosome chr14 scaffold_26, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
122 |
Score (bit) |
94.7 |
E-value |
4.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962236|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_F03, 5' (613 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PRC0|A7PRC0_VITVI Chromosome chr14 scaffold_26, whole genom... 95 4e-18 tr|Q1M2Z4|Q1M2Z4_PLAAC Ampk protein (Fragment) OS=Platanus aceri... 91 7e-17 tr|A9RYN0|A9RYN0_PHYPA Predicted protein OS=Physcomitrella paten... 91 7e-17 tr|Q6Z0Y8|Q6Z0Y8_ORYSJ Os02g0135900 protein OS=Oryza sativa subs... 87 6e-16 tr|B8AHD0|B8AHD0_ORYSI Putative uncharacterized protein OS=Oryza... 87 6e-16 tr|A3A2X1|A3A2X1_ORYSJ Putative uncharacterized protein OS=Oryza... 87 6e-16 tr|A9PE01|A9PE01_POPTR Putative uncharacterized protein OS=Popul... 86 2e-15 tr|Q94AX2|Q94AX2_ARATH AT5g39790/MKM21_80 OS=Arabidopsis thalian... 82 2e-14 tr|B4FI49|B4FI49_MAIZE Putative uncharacterized protein OS=Zea m... 82 2e-14 tr|A9RQ51|A9RQ51_PHYPA Predicted protein (Fragment) OS=Physcomit... 73 1e-11 tr|Q70FJ1|Q70FJ1_MOUSE A-kinase anchor protein 9 OS=Mus musculus... 40 0.14 tr|Q5R4Y8|Q5R4Y8_PONAB Putative uncharacterized protein DKFZp459... 38 0.40 tr|A6QQ99|A6QQ99_BOVIN CCDC88A protein (Fragment) OS=Bos taurus ... 38 0.40 tr|B6PIQ6|B6PIQ6_BRAFL Putative uncharacterized protein (Fragmen... 38 0.40 tr|B6M246|B6M246_BRAFL Putative uncharacterized protein (Fragmen... 38 0.40 tr|Q9UI01|Q9UI01_HUMAN Putative uncharacterized protein OS=Homo ... 38 0.40 tr|Q86YH1|Q86YH1_HUMAN CCDC88A protein (Fragment) OS=Homo sapien... 38 0.40 tr|Q6PAV0|Q6PAV0_HUMAN CCDC88A protein (Fragment) OS=Homo sapien... 38 0.40 tr|Q6DCA5|Q6DCA5_HUMAN CCDC88A protein (Fragment) OS=Homo sapien... 38 0.40 tr|O14997|O14997_HUMAN Putative uncharacterized protein (Fragmen... 38 0.40 tr|B7ZM78|B7ZM78_HUMAN Putative uncharacterized protein OS=Homo ... 38 0.40 tr|Q0ZCE5|Q0ZCE5_POPTR Putative uncharacterized protein OS=Popul... 37 0.69 tr|Q23DH8|Q23DH8_TETTH DNA-directed RNA polymerase, omega subuni... 37 0.90 tr|B6NEH4|B6NEH4_BRAFL Putative uncharacterized protein (Fragmen... 37 0.90 tr|Q9W6V0|Q9W6V0_CHICK Hyperion protein, 419 kD isoform OS=Gallu... 36 1.5 tr|Q5SV02|Q5SV02_MOUSE RAD50 homolog (S. cerevisiae) OS=Mus musc... 36 2.0 tr|Q3UNL2|Q3UNL2_MOUSE Putative uncharacterized protein OS=Mus m... 36 2.0 tr|Q3ULX6|Q3ULX6_MOUSE Putative uncharacterized protein OS=Mus m... 36 2.0 tr|A8Y5I3|A8Y5I3_MOUSE RAD50 homolog (S. cerevisiae) (Fragment) ... 36 2.0 tr|Q4DBQ4|Q4DBQ4_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.0
>tr|A7PRC0|A7PRC0_VITVI Chromosome chr14 scaffold_26, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022432001 PE=4 SV=1 Length = 317
Score = 94.7 bits (234), Expect = 4e-18 Identities = 54/122 (44%), Positives = 75/122 (61%) Frame = +3
Query: 246 SANTEYLENQPKEGASGLYFGQPTQKEEVIAIRESAVRASLMKKLSDINLYGRHLQRQLR 425 S N E+ P+E QP +E+ + + R L+KKLS+ N R L+RQL Sbjct: 106 SDNENASEDSPEE-----LLDQPLGSDELKTLLVDSERTKLIKKLSEANQQNRILKRQLY 160
Query: 426 EKEDALLKCKSELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQSHVALKLEELQE 605 KEDAL+ KSEL ME ++Q L LA+EIAK G+ G+R+I+GKYIQSH+ +LE + E Sbjct: 161 IKEDALVNFKSELAVMELEVQALVSLAEEIAKSGIPKGSRKINGKYIQSHLHSRLEAVHE 220
Query: 606 RL 611 +L Sbjct: 221 KL 222
>tr|Q1M2Z4|Q1M2Z4_PLAAC Ampk protein (Fragment) OS=Platanus acerifolia GN=ampk PE=2 SV=1 Length = 205
Score = 90.5 bits (223), Expect = 7e-17 Identities = 45/105 (42%), Positives = 72/105 (68%) Frame = +3
Query: 279 KEGASGLYFGQPTQKEEVIAIRESAVRASLMKKLSDINLYGRHLQRQLREKEDALLKCKS 458 ++ +S + QP + + ++ + R L++KLS+ N + R L+RQL KEDAL+ KS Sbjct: 99 EKDSSKEFLSQPLDGDGLKSLLADSERTKLIRKLSEANQHNRFLKRQLLIKEDALVNFKS 158
Query: 459 ELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQSHVALKLE 593 EL +E +IQ L +LA+E+AK G++ G+R+I+GKYIQSH+ +LE Sbjct: 159 ELSVIELEIQALVKLAEEVAKSGIQQGSRKINGKYIQSHLLSRLE 203
>tr|A9RYN0|A9RYN0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161880 PE=4 SV=1 Length = 312
Score = 90.5 bits (223), Expect = 7e-17 Identities = 41/82 (50%), Positives = 61/82 (74%) Frame = +3
Query: 357 RASLMKKLSDINLYGRHLQRQLREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKP 536 + L+ KLS N Y R LQ LR+KE+AL+K +SEL M+ ++Q+L R+ EI + G+KP Sbjct: 131 KLQLLNKLSVANQYIRQLQHDLRDKEEALVKTRSELSAMQMELQVLVRILHEIGRQGIKP 190
Query: 537 GTRQIDGKYIQSHVALKLEELQ 602 GT++I+G+YI SH+A +LEE+Q Sbjct: 191 GTQKINGRYIHSHLASRLEEMQ 212
>tr|Q6Z0Y8|Q6Z0Y8_ORYSJ Os02g0135900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0081C13.12 PE=4 SV=1 Length = 306
Score = 87.4 bits (215), Expect = 6e-16 Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 10/134 (7%) Frame = +3
Query: 240 EDSANTEYLENQPKEGAS--GLYFGQPTQK--------EEVIAIRESAVRASLMKKLSDI 389 ED + + P E S G +G P++ +E+ ++ + R+ L+KKLS+ Sbjct: 78 EDGPASSDSTSSPSEQTSDGGEVYGDPSENLNSRKLKSDELKSLLADSERSKLLKKLSEA 137
Query: 390 NLYGRHLQRQLREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQ 569 N Y R L+RQL+ K++ ++K KSEL ME ++Q L LA+EIA V G+R+I+GKYIQ Sbjct: 138 NQYNRFLKRQLQMKDNDVVKFKSELAVMELELQALVALAEEIANFDVPSGSRKINGKYIQ 197
Query: 570 SHVALKLEELQERL 611 SH+ +LE + +++ Sbjct: 198 SHLLTRLEAVHDKV 211
>tr|B8AHD0|B8AHD0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05763 PE=4 SV=1 Length = 460
Score = 87.4 bits (215), Expect = 6e-16 Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 10/134 (7%) Frame = +3
Query: 240 EDSANTEYLENQPKEGAS--GLYFGQPTQK--------EEVIAIRESAVRASLMKKLSDI 389 ED + + P E S G +G P++ +E+ ++ + R+ L+KKLS+ Sbjct: 232 EDGPASSDSTSSPSEQTSDGGEVYGDPSENLNSRKLKSDELKSLLADSERSKLLKKLSEA 291
Query: 390 NLYGRHLQRQLREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQ 569 N Y R L+RQL+ K++ ++K KSEL ME ++Q L LA+EIA V G+R+I+GKYIQ Sbjct: 292 NQYNRFLKRQLQMKDNDVVKFKSELAVMELELQALVALAEEIANFDVPSGSRKINGKYIQ 351
Query: 570 SHVALKLEELQERL 611 SH+ +LE + +++ Sbjct: 352 SHLLTRLEAVHDKV 365
>tr|A3A2X1|A3A2X1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005143 PE=4 SV=1 Length = 463
Score = 87.4 bits (215), Expect = 6e-16 Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 10/134 (7%) Frame = +3
Query: 240 EDSANTEYLENQPKEGAS--GLYFGQPTQK--------EEVIAIRESAVRASLMKKLSDI 389 ED + + P E S G +G P++ +E+ ++ + R+ L+KKLS+ Sbjct: 235 EDGPASSDSTSSPSEQTSDGGEVYGDPSENLNSRKLKSDELKSLLADSERSKLLKKLSEA 294
Query: 390 NLYGRHLQRQLREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQ 569 N Y R L+RQL+ K++ ++K KSEL ME ++Q L LA+EIA V G+R+I+GKYIQ Sbjct: 295 NQYNRFLKRQLQMKDNDVVKFKSELAVMELELQALVALAEEIANFDVPSGSRKINGKYIQ 354
Query: 570 SHVALKLEELQERL 611 SH+ +LE + +++ Sbjct: 355 SHLLTRLEAVHDKV 368
>tr|A9PE01|A9PE01_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 299
Score = 85.9 bits (211), Expect = 2e-15 Identities = 49/124 (39%), Positives = 76/124 (61%) Frame = +3
Query: 240 EDSANTEYLENQPKEGASGLYFGQPTQKEEVIAIRESAVRASLMKKLSDINLYGRHLQRQ 419 ++ +++E L +P + Q +E+ A+ + R +L KKLS+ N R L+RQ Sbjct: 89 DEGSSSEDLPEEPLD--------QSLSSDELKALLLDSQRKNLTKKLSEANQQNRFLKRQ 140
Query: 420 LREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKPGTRQIDGKYIQSHVALKLEEL 599 L EDAL+ KSEL ME +IQ L L++EIA+ + G+R+I+GKY+QSH+ +L L Sbjct: 141 LHVMEDALVNFKSELAVMELEIQALVTLSEEIAQYEIPEGSRKINGKYVQSHLLSRLRVL 200
Query: 600 QERL 611 QE+L Sbjct: 201 QEKL 204
>tr|Q94AX2|Q94AX2_ARATH AT5g39790/MKM21_80 OS=Arabidopsis thaliana PE=2 SV=1 Length = 277
Score = 82.4 bits (202), Expect = 2e-14 Identities = 40/101 (39%), Positives = 67/101 (66%) Frame = +3
Query: 309 QPTQKEEVIAIRESAVRASLMKKLSDINLYGRHLQRQLREKEDALLKCKSELETMESDIQ 488 +P +E+ ++ R+ L+KKLS+ N R L+RQL+ +E + K+EL ME ++Q Sbjct: 82 RPLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQLKTQEHEITNIKTELALMELEVQ 141
Query: 489 ILARLAQEIAKDGVKPGTRQIDGKYIQSHVALKLEELQERL 611 L +LA+EIA G+ G+R+I GKYIQSH+ +L+ +Q+++ Sbjct: 142 ALVKLAEEIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKM 182
>tr|B4FI49|B4FI49_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 305
Score = 82.4 bits (202), Expect = 2e-14 Identities = 40/96 (41%), Positives = 68/96 (70%) Frame = +3
Query: 324 EEVIAIRESAVRASLMKKLSDINLYGRHLQRQLREKEDALLKCKSELETMESDIQILARL 503 +E+ A+ + R+ L+++LS+ N Y R L+RQL+ K+DA++K K EL +E ++Q L L Sbjct: 115 DELKALLADSERSRLLRRLSEANQYNRFLKRQLQIKDDAVVKFKGELAVLELEMQALVGL 174
Query: 504 AQEIAKDGVKPGTRQIDGKYIQSHVALKLEELQERL 611 A+E+A V G+R+I+GKYIQSH+ +LE + +++ Sbjct: 175 AEEVANFDVPLGSRKINGKYIQSHLLSRLEAVHDKI 210
>tr|A9RQ51|A9RQ51_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_45927 PE=4 SV=1 Length = 179
Score = 73.2 bits (178), Expect = 1e-11 Identities = 37/85 (43%), Positives = 58/85 (68%) Frame = +3
Query: 357 RASLMKKLSDINLYGRHLQRQLREKEDALLKCKSELETMESDIQILARLAQEIAKDGVKP 536 R+ L+ KLS+ N Y HLQ +L+ KED+L EL ME ++Q+L +AQEI+ +KP Sbjct: 1 RSKLLGKLSEANQYISHLQYELQLKEDSLTDTGKELSAMEMELQVLIDMAQEISGQIIKP 60
Query: 537 GTRQIDGKYIQSHVALKLEELQERL 611 G+R+I+G + S++ +LEE+Q+ L Sbjct: 61 GSRKINGLDLHSYLVARLEEMQKVL 85
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