DK962249 |
Clone id |
TST39A01NGRL0013_F17 |
Library |
TST39 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_F17. 5' end sequence. |
Accession |
DK962249 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL151Contig1 |
Sequence |
GAAGTTGGGGTTTACGAGCCTGTGCGTTTGTTCTTATTGCTGCTGCTGCTAACGAGCACT CCATCCAGCAGAGAAGATGGCGGAAGCAGTGCCCCTCCCTTCCGGTCAGCCTGAAGTGAA GCTCTTTGGCCGCTGGACCTTCGATGACGTCGAGATCAATGACATCTCGCTGGCTGACTA TATCGCTGTCTCGGTGCACAAACATGCCACCTTTGTGCCTCATACCGCTGGGAGATATTC GGTGAAACGTTTCACAAAGGCCCAGTGCCCCATTGTGGAGAGATTGACCAACTCTCTCAT GATGCATGGCCGAAACAATGGAAAGAAGCTAATGGCAGTGCGGATTGTTAAGCACGCCAT GGAGATTATTCACTTGTTGACTGATCAAAATCCAATTCAAGTTATTGTTGATGCAGTTAT CAACAGTGGTCCTCGGGAGGATGCCACTCGTATTGGATCGGCTGGTGTTGTTAGAAGACA GGCTGTCGATATCTCTCCTCTTAGGAGAGTAAACCAGGCTATCTATCTCCTCACTACTGG TGCTCGAGAGAGTGCTTTCAGAAATATCAAGACTATAGCGGAGTGCCTTGCTGATGAGCT GATCAATGCAGCCAAAGGTTCTTCCAATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65731 |
Definition |
sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum |
Align length |
174 |
Score (bit) |
313.0 |
E-value |
5.0e-85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHY5 |
Definition |
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
174 |
Score (bit) |
335.0 |
E-value |
1.0e-90 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962249|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_F17, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 335 1e-90 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 328 2e-88 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 317 5e-85 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 315 1e-84 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 315 1e-84 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 315 2e-84 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 313 4e-84 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 310 5e-83 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 309 1e-82 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 309 1e-82 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 306 7e-82 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 306 7e-82 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 306 9e-82 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 306 9e-82 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 304 3e-81 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 304 3e-81 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 303 6e-81 tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 302 1e-80 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 301 2e-80 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 297 3e-79 tr|Q7SYU3|Q7SYU3_XENLA MGC64490 protein OS=Xenopus laevis GN=rps... 291 2e-77 tr|Q0P475|Q0P475_DANRE Zgc:153322 OS=Danio rerio GN=zgc:153322 P... 290 6e-77 tr|Q28EJ8|Q28EJ8_XENTR Ribosomal protein S5 OS=Xenopus tropicali... 288 1e-76 tr|Q90YR9|Q90YR9_ICTPU 40S ribosomal protein S5 OS=Ictalurus pun... 287 4e-76 tr|Q6Y214|Q6Y214_PAGMA 40S ribosomal protein S5 (Fragment) OS=Pa... 287 4e-76 tr|A2Q0S0|A2Q0S0_SOLSE Ribosomal protein S5 OS=Solea senegalensi... 287 4e-76 tr|Q91V55|Q91V55_MOUSE Putative uncharacterized protein OS=Mus m... 287 4e-76 tr|B0BN81|B0BN81_RAT Rps5 protein (Ribosomal protein S5, isoform... 287 4e-76 tr|Q4KTD7|Q4KTD7_SUBDO S5 OS=Suberites domuncula PE=2 SV=1 287 4e-76 tr|Q53G25|Q53G25_HUMAN Ribosomal protein S5 variant (Fragment) O... 287 4e-76
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 335 bits (859), Expect = 1e-90 Identities = 168/174 (96%), Positives = 172/174 (98%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERL 286 QPEVKLFGRW+FDD+EINDISLADYIAVSV KHATFVPHTAGRYSVKRF KAQCPIVERL Sbjct: 5 QPEVKLFGRWSFDDIEINDISLADYIAVSVDKHATFVPHTAGRYSVKRFRKAQCPIVERL 64
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDATRIGSAG Sbjct: 65 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDATRIGSAG 124
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 V+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 125 VIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 178
>tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 328 bits (840), Expect = 2e-88 Identities = 167/181 (92%), Positives = 172/181 (95%) Frame = +2
Query: 86 AVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQ 265 A LP QPEVKLF RWTF+DVE+ND+SLADYIAV KHATFVPHTAGRYSVKRF KAQ Sbjct: 2 AATLP--QPEVKLFNRWTFEDVEVNDLSLADYIAVQSQKHATFVPHTAGRYSVKRFRKAQ 59
Query: 266 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDA 445 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDA Sbjct: 60 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDA 119
Query: 446 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSS 625 TRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGARESAFRNIKTIAECLADELINAAKGSS Sbjct: 120 TRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGARESAFRNIKTIAECLADELINAAKGSS 179
Query: 626 N 628 N Sbjct: 180 N 180
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 317 bits (811), Expect = 5e-85 Identities = 159/174 (91%), Positives = 168/174 (96%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERL 286 Q EVKLF RW+F++VE++DISLADYIAVS KHAT++PHTAGRY+VKRF KAQCPIVERL Sbjct: 4 QQEVKLFNRWSFEEVEVSDISLADYIAVSPAKHATYLPHTAGRYAVKRFRKAQCPIVERL 63
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 64 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 123
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 124 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 177
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 315 bits (808), Expect = 1e-84 Identities = 162/184 (88%), Positives = 172/184 (93%) Frame = +2
Query: 77 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFT 256 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRF Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 257 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 436 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 437 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 616 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 177
Query: 617 GSSN 628 GSSN Sbjct: 178 GSSN 181
>tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36106 PE=3 SV=1 Length = 199
Score = 315 bits (808), Expect = 1e-84 Identities = 162/184 (88%), Positives = 172/184 (93%) Frame = +2
Query: 77 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFT 256 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRF Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 257 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 436 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 437 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 616 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 177
Query: 617 GSSN 628 GSSN Sbjct: 178 GSSN 181
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 315 bits (806), Expect = 2e-84 Identities = 158/172 (91%), Positives = 166/172 (96%) Frame = +2
Query: 113 EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERLTN 292 EVKLF RW+FD+V+I D+SL DY+AV+ KHAT+VPHTAGRYSVKRF KAQCPIVERLTN Sbjct: 15 EVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 74
Query: 293 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 472 SLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV Sbjct: 75 SLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 134
Query: 473 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 135 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 186
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 313 bits (803), Expect = 4e-84 Identities = 157/171 (91%), Positives = 166/171 (97%) Frame = +2
Query: 116 VKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERLTNS 295 VKLF RW+FD+V+I+DISL DYIAV+ KHAT+VPHTAGRYSVKRF KAQCPIVERLTNS Sbjct: 20 VKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 79
Query: 296 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 475 LMMHGRNNGKKLMAVRI+KHAMEIIHLLT+QNPIQVIVDAVINSGPREDATRIGSAGVVR Sbjct: 80 LMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVR 139
Query: 476 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 RQAVDISPLRR+NQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 140 RQAVDISPLRRINQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 190
>tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 207
Score = 310 bits (794), Expect = 5e-83 Identities = 160/190 (84%), Positives = 169/190 (88%), Gaps = 6/190 (3%) Frame = +2
Query: 77 MAEAVPLPSGQP------EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRY 238 MAEAV P +VKLF RW+FDD+ +NDISLADY+ V V KHAT+VPHTAGRY Sbjct: 1 MAEAVVAPPNPEANQAIYDVKLFNRWSFDDINVNDISLADYVGVQV-KHATYVPHTAGRY 59
Query: 239 SVKRFTKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 418 SVKRF KAQCPIVERLTNSL MHGRNNGKKL AV IVKHAMEIIHLLTDQNPIQVIVDAV Sbjct: 60 SVKRFRKAQCPIVERLTNSLQMHGRNNGKKLKAVTIVKHAMEIIHLLTDQNPIQVIVDAV 119
Query: 419 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADE 598 +NSGPREDATRIGSAGVVRRQAVDISPLRRVNQA+YLLTTGARE+AFRNIKTIAECLADE Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKTIAECLADE 179
Query: 599 LINAAKGSSN 628 LINAAKGSSN Sbjct: 180 LINAAKGSSN 189
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 309 bits (791), Expect = 1e-82 Identities = 154/174 (88%), Positives = 164/174 (94%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERL 286 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRF KAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 182
>tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00008 PE=3 SV=1 Length = 200
Score = 309 bits (791), Expect = 1e-82 Identities = 154/174 (88%), Positives = 164/174 (94%) Frame = +2
Query: 107 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFTKAQCPIVERL 286 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRF KAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 287 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 466 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 467 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 628 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 182
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