DK962269 |
Clone id |
TST39A01NGRL0013_G15 |
Library |
TST39 |
Length |
529 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_G15. 5' end sequence. |
Accession |
DK962269 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCAGTTTGAAGATACATGAAGACCTTGAATTCACTCCAGAGCTGTTTGAGGAGCATAGG CAGAATGTTGCTGTGGAGCAAATTTTACAAGTTGTTCTTCTAGATCCAAAGCAACCTTCC TCTCAACTAGAGAGGCTTAAAGTGCTCATGTCGGAAGCTGATTCTGCACAAGAGGCACAA AGCAAGTCGTCGAAAAATCAGAAACCAAACAATATCCATGATGTCAGTGTGCTAGAGGAA TGGAAGCAGAGAAAGCTAGCCCGACAACAGACAAGGTAGCGGATTTAGTACACCGACTTA CAACAGTGTACATGGTGTTGCAACCAATAACCTGCAATAAATTGTTGACACTCCTCTATT ATGCAGGACAGTAACCAATGTCGAAGAGCTTATTGCAAAATATCAAATTGTGTTTCCACT CAGTCATGTCACCATGTGCATGCAATACAACCTCGGTGGTGACCATTTACACATGTAATA AATTAGCAGCTTTGGTTTCCCTTCATGACTGGCAAAGATGAACCTAAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P30031 |
Definition |
sp|P30031|VS10_ROTH7 Non-structural glycoprotein 4 OS=Rotavirus A (isolate Human/United Kingdom/A64/1987 G10-P11[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3) |
Align length |
74 |
Score (bit) |
30.8 |
E-value |
4.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FUC2 |
Definition |
tr|B4FUC2|B4FUC2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
93 |
Score (bit) |
85.5 |
E-value |
2.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962269|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_G15, 5' (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FUC2|B4FUC2_MAIZE Putative uncharacterized protein OS=Zea m... 86 2e-15 tr|A9P9P0|A9P9P0_POPTR Putative uncharacterized protein OS=Popul... 85 3e-15 tr|A9P9L6|A9P9L6_POPTR Putative uncharacterized protein OS=Popul... 85 3e-15 tr|Q2HTV7|Q2HTV7_MEDTR Major sperm protein OS=Medicago truncatul... 84 4e-15 tr|A9NUN7|A9NUN7_PICSI Putative uncharacterized protein OS=Picea... 83 1e-14 tr|A9NRI2|A9NRI2_PICSI Putative uncharacterized protein OS=Picea... 83 1e-14 tr|B6TP74|B6TP74_MAIZE Structural molecule OS=Zea mays PE=2 SV=1 82 1e-14 tr|A5BZK7|A5BZK7_VITVI Putative uncharacterized protein (Chromos... 82 2e-14 tr|Q6YZ10|Q6YZ10_ORYSJ Os08g0141300 protein OS=Oryza sativa subs... 81 3e-14 tr|B8BAM7|B8BAM7_ORYSI Putative uncharacterized protein OS=Oryza... 81 3e-14 tr|A3BPI9|A3BPI9_ORYSJ Putative uncharacterized protein OS=Oryza... 81 3e-14 tr|Q9S9T2|Q9S9T2_ARATH T32N4.12 protein (AT4g05060 protein) OS=A... 81 4e-14 tr|Q8LPQ7|Q8LPQ7_ARATH AT4g05060/T32N4_12 OS=Arabidopsis thalian... 81 4e-14 tr|Q56X74|Q56X74_ARATH Putative uncharacterized protein At4g0506... 81 4e-14 tr|Q1ECE0|Q1ECE0_ARATH At5g54110 OS=Arabidopsis thaliana PE=2 SV=1 81 4e-14 tr|P93040|P93040_ARATH Membrane associated protein OS=Arabidopsi... 81 4e-14 tr|B8LM44|B8LM44_PICSI Putative uncharacterized protein OS=Picea... 80 6e-14 tr|A7R2L7|A7R2L7_VITVI Chromosome undetermined scaffold_434, who... 80 8e-14 tr|B7FKV5|B7FKV5_MEDTR Putative uncharacterized protein OS=Medic... 79 1e-13 tr|Q8VYN2|Q8VYN2_ARATH Putative membrane associated protein OS=A... 79 2e-13 tr|Q8LAZ8|Q8LAZ8_ARATH Membrane associated protein-like protein ... 79 2e-13 tr|O65410|O65410_ARATH Putative membrane associated protein OS=A... 79 2e-13 tr|A5ARH9|A5ARH9_VITVI Putative uncharacterized protein (Chromos... 77 4e-13 tr|A9RUB0|A9RUB0_PHYPA Predicted protein OS=Physcomitrella paten... 76 1e-12 tr|A9TMJ2|A9TMJ2_PHYPA Predicted protein OS=Physcomitrella paten... 75 3e-12 tr|Q6Z407|Q6Z407_ORYSJ Os07g0558800 protein OS=Oryza sativa subs... 73 8e-12 tr|A9RNI9|A9RNI9_PHYPA Predicted protein OS=Physcomitrella paten... 73 8e-12 tr|A3BL42|A3BL42_ORYSJ Putative uncharacterized protein OS=Oryza... 73 8e-12 tr|A2YML4|A2YML4_ORYSI Putative uncharacterized protein OS=Oryza... 73 8e-12 tr|Q9LVV9|Q9LVV9_ARATH Membrane associated protein OS=Arabidopsi... 72 2e-11
>tr|B4FUC2|B4FUC2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 228
Score = 85.5 bits (210), Expect = 2e-15 Identities = 43/93 (46%), Positives = 67/93 (72%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VSLK+ +E+ PELF+E + VAVEQIL+VV LD ++PS Q+++LK ++EA++A EA+ Sbjct: 129 VSLKVKGPVEYVPELFDEQKDQVAVEQILRVVFLDAERPSPQMDKLKRQLAEAEAALEAR 188
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P + + V++EWK+R+ LARQQ Sbjct: 189 KKPPEDNGPRIVGEGLVIDEWKERRERYLARQQ 221
>tr|A9P9P0|A9P9P0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 264
Score = 84.7 bits (208), Expect = 3e-15 Identities = 41/93 (44%), Positives = 67/93 (72%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 +SLK+ ++E+ PE+F+E + VAVEQIL+V+ LDP+ PS LE+LK ++EA++ EA+ Sbjct: 166 MSLKVKGEMEYVPEMFDEQKDQVAVEQILRVIFLDPECPSPALEKLKRQLAEAEAELEAR 225
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P +++ V++EWK+R+ LARQQ Sbjct: 226 KKPPEDAGPRVVNEGLVIDEWKERRERYLARQQ 258
>tr|A9P9L6|A9P9L6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 264
Score = 84.7 bits (208), Expect = 3e-15 Identities = 41/93 (44%), Positives = 67/93 (72%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 +SLK+ ++E+ PE+F+E + VAVEQIL+V+ LDP+ PS LE+LK ++EA++ EA+ Sbjct: 166 MSLKVKGEMEYVPEMFDEQKDQVAVEQILRVIFLDPECPSPALEKLKRQLAEAEAELEAR 225
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P +++ V++EWK+R+ LARQQ Sbjct: 226 KKPPEDAGPRVVNEGLVIDEWKERRERYLARQQ 258
>tr|Q2HTV7|Q2HTV7_MEDTR Major sperm protein OS=Medicago truncatula GN=MtrDRAFT_AC149642g3v2 PE=4 SV=1 Length = 266
Score = 84.0 bits (206), Expect = 4e-15 Identities = 42/93 (45%), Positives = 67/93 (72%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 +SLK+ +++ PELF+E + VAVEQIL+VV LDP++PS LE+LK +++AD+A E + Sbjct: 166 MSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEER 225
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K +++ P I + V++EWK+R+ LA+QQ Sbjct: 226 KKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQ 258
>tr|A9NUN7|A9NUN7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 253
Score = 82.8 bits (203), Expect = 1e-14 Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 4/94 (4%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VS+K+ + E+ PELFEEH++ VA+E +LQVV LDP++P +LE+LK ++EAD ++AQ Sbjct: 153 VSMKVKQGTEYIPELFEEHKEFVALESVLQVVFLDPQRPCKELEKLKKRLAEADDIKQAQ 212
Query: 181 SKSSKNQKPNNIHDV-SVLEEWKQRK---LARQQ 270 K N+ V++EW+ R+ LARQQ Sbjct: 213 KKPQNNKAAKVAAPTEGVIDEWRDRREKYLARQQ 246
>tr|A9NRI2|A9NRI2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 262
Score = 82.8 bits (203), Expect = 1e-14 Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 4/94 (4%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VSLK+ E EFT ELF+EH++ VAVE++LQVV LDP++P LE+LK ++EA++ +A+ Sbjct: 164 VSLKVKEGAEFTSELFDEHKELVAVERVLQVVFLDPQRPCQDLEKLKKRLAEAEALNQAR 223
Query: 181 SKSSKNQKPNNIHDV-SVLEEWKQRK---LARQQ 270 K + P + VL+ WK R+ LARQQ Sbjct: 224 KKPQDDNTPKSTDPAEGVLDIWKDRREKYLARQQ 257
>tr|B6TP74|B6TP74_MAIZE Structural molecule OS=Zea mays PE=2 SV=1 Length = 229
Score = 82.4 bits (202), Expect = 1e-14 Identities = 42/93 (45%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VSLK+ +E+ PELF+E + VAVEQIL+VV LD ++PS Q+++LK ++EA++A EA+ Sbjct: 130 VSLKVKGPVEYVPELFDEQKDQVAVEQILRVVFLDAERPSPQMDKLKRQLAEAEAALEAR 189
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ + + V++EWK+R+ LARQQ Sbjct: 190 KKPPEDNGTRIVGEGLVIDEWKERRERYLARQQ 222
>tr|A5BZK7|A5BZK7_VITVI Putative uncharacterized protein (Chromosome chr12 scaffold_47, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00029184001 PE=4 SV=1 Length = 240
Score = 81.6 bits (200), Expect = 2e-14 Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 +SLK+ ++++ PELF+E + VA EQIL+VV LD ++PS LE+LK ++EA++A EA+ Sbjct: 141 MSLKVKGEMDYVPELFDEQKDQVAEEQILRVVFLDTERPSPPLEKLKRQLAEAEAALEAR 200
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P + + V++EWK+R+ LARQQ Sbjct: 201 KKPPEDTGPRIVGEGLVIDEWKERRERYLARQQ 233
>tr|Q6YZ10|Q6YZ10_ORYSJ Os08g0141300 protein OS=Oryza sativa subsp. japonica GN=P0473D02.15 PE=2 SV=1 Length = 233
Score = 81.3 bits (199), Expect = 3e-14 Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VSLK+ +E+ PELF+E + VAVEQIL+VV LD ++ + Q+++LK ++EA++A EA+ Sbjct: 134 VSLKVKGPMEYVPELFDEQKNQVAVEQILRVVFLDAERQTPQMDKLKRQLAEAEAALEAR 193
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P + + V++EWK+R+ LARQQ Sbjct: 194 KKPPEDTGPRIVGEGLVIDEWKERRERYLARQQ 226
>tr|B8BAM7|B8BAM7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27767 PE=4 SV=1 Length = 250
Score = 81.3 bits (199), Expect = 3e-14 Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = +1
Query: 1 VSLKIHEDLEFTPELFEEHRQNVAVEQILQVVLLDPKQPSSQLERLKVLMSEADSAQEAQ 180 VSLK+ +E+ PELF+E + VAVEQIL+VV LD ++ + Q+++LK ++EA++A EA+ Sbjct: 151 VSLKVKGPMEYVPELFDEQKNQVAVEQILRVVFLDAERQTPQMDKLKRQLAEAEAALEAR 210
Query: 181 SKSSKNQKPNNIHDVSVLEEWKQRK---LARQQ 270 K ++ P + + V++EWK+R+ LARQQ Sbjct: 211 KKPPEDTGPRIVGEGLVIDEWKERRERYLARQQ 243
|