DK962281 |
Clone id |
TST39A01NGRL0013_H04 |
Library |
TST39 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_H04. 5' end sequence. |
Accession |
DK962281 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1898Contig1 |
Sequence |
CAACTTAGTGTGTATGACCCACAGGTGACCGCTGATCAAATTATGCGTGATCTAGCTATG AATAAGTTTGATTGGGATCACCCTCAGCATCTGCAGCCGATGAGTCCTACCACCACAAAG CAGGTAGATGTTGTATGGGACGCATATGAGGCTACTAAGAATGCACATGGTGTATGCATC TTAACTGAATGGGATGAATTTAAGAAGCTGGATTACAAGAGAATTTATGATGGAATGCAG AAGCCTGCTTTCATATTTGACGGGCGCAATGTGATCAATGTTGAGGAGTTGCGCAAAATT GGCTTTATTGTCTACTCAGTTGGAAAGCCTCTTGATCCTTGGGTTAAGGACCTTCCTGCA GCTCCTCCATCTTGAAGGTGTTAATCATGCTTGCTCCATTAGAGGCAATCAAGCATTTGT TTCTATGCTAATATAAGAGAGATGACCTCACAAATACAATGTAGACTGGAGGTGATGAAT AGCTATCTTACAGTAATCTGCTGCATTCTTTACTTGTATGCAATTTTTTCACATTTTTGA GTTGAGCATTTATGACCAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FM01 |
Definition |
sp|Q9FM01|UGDH2_ARATH Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidopsis thaliana |
Align length |
120 |
Score (bit) |
216.0 |
E-value |
8.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962281|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_H04, 5' (565 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FM01|UGDH2_ARATH Probable UDP-glucose 6-dehydrogenase 2 OS=... 216 8e-56 sp|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase OS=Glycine max ... 214 2e-55 sp|Q9LIA8|UGDH1_ARATH Probable UDP-glucose 6-dehydrogenase 1 OS=... 214 2e-55 sp|O02373|UGDH_DROME UDP-glucose 6-dehydrogenase OS=Drosophila m... 92 1e-18 sp|Q5R7B3|UGDH_PONAB UDP-glucose 6-dehydrogenase OS=Pongo abelii... 88 3e-17 sp|O60701|UGDH_HUMAN UDP-glucose 6-dehydrogenase OS=Homo sapiens... 88 3e-17 sp|P12378|UGDH_BOVIN UDP-glucose 6-dehydrogenase OS=Bos taurus G... 87 6e-17 sp|O70199|UGDH_RAT UDP-glucose 6-dehydrogenase OS=Rattus norvegi... 85 3e-16 sp|O70475|UGDH_MOUSE UDP-glucose 6-dehydrogenase OS=Mus musculus... 85 3e-16 sp|Q5F3T9|UGDH_CHICK UDP-glucose 6-dehydrogenase OS=Gallus gallu... 85 3e-16 sp|Q19905|UGDH_CAEEL UDP-glucose 6-dehydrogenase OS=Caenorhabdit... 85 3e-16 sp|Q58454|Y1054_METJA Uncharacterized protein MJ1054 OS=Methanoc... 58 4e-08 sp|Q92GB1|UDG_RICCN UDP-glucose 6-dehydrogenase OS=Rickettsia co... 57 8e-08 sp|Q4UK39|UDG_RICFE UDP-glucose 6-dehydrogenase OS=Rickettsia fe... 56 1e-07 sp|O32271|TUAD_BACSU UDP-glucose 6-dehydrogenase OS=Bacillus sub... 56 1e-07 sp|O54068|UDG_RHIME UDP-glucose 6-dehydrogenase OS=Rhizobium mel... 56 1e-07 sp|Q68VX0|UDG_RICTY UDP-glucose 6-dehydrogenase OS=Rickettsia ty... 55 2e-07 sp|O05973|UDG_RICPR UDP-glucose 6-dehydrogenase OS=Rickettsia pr... 55 2e-07 sp|Q1RKF8|UDG_RICBR UDP-glucose 6-dehydrogenase OS=Rickettsia be... 50 6e-06 sp|O86422|UDG_PSEAE UDP-glucose 6-dehydrogenase OS=Pseudomonas a... 49 2e-05 sp|P96718|YWQF_BACSU UDP-glucose 6-dehydrogenase OS=Bacillus sub... 47 9e-05 sp|P23631|LATA_LATMA Alpha-latrotoxin OS=Latrodectus mactans PE=... 33 0.98 sp|P26812|YMCP_BPF41 Uncharacterized protein in mcp 3'region (Fr... 30 6.4 sp|A0PZC7|VATB_CLONN V-type ATP synthase beta chain OS=Clostridi... 30 8.3
>sp|Q9FM01|UGDH2_ARATH Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidopsis thaliana GN=UGD2 PE=2 SV=1 Length = 480
Score = 216 bits (549), Expect = 8e-56 Identities = 93/120 (77%), Positives = 109/120 (90%) Frame = +1
Query: 1 QLSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCI 180 Q+S+YDPQVT +QI RDL+M KFDWDHP HLQPMSPTT KQV V WDAYEATK+AH VC+ Sbjct: 359 QISIYDPQVTEEQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVTWDAYEATKDAHAVCV 418
Query: 181 LTEWDEFKKLDYKRIYDGMQKPAFIFDGRNVINVEELRKIGFIVYSVGKPLDPWVKDLPA 360 LTEWDEFK LDY++I+D MQKPAFIFDGRN++NV +LR+IGFIVYS+GKPLDPW+KD+PA Sbjct: 419 LTEWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSIGKPLDPWLKDMPA 478
>sp|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV=1 Length = 480
Score = 214 bits (546), Expect = 2e-55 Identities = 92/119 (77%), Positives = 110/119 (92%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 LS+YDPQVT DQI RDL+MNKFDWDHP HLQP SPTT K+V VVWDAYEATK+AHG+CIL Sbjct: 360 LSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPTTVKKVSVVWDAYEATKDAHGLCIL 419
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVINVEELRKIGFIVYSVGKPLDPWVKDLPA 360 TEWDEFK LDY++I+D MQKPAF+FDGRN+++ ++LR+IGFIVYS+GKPLDPW+KD+PA Sbjct: 420 TEWDEFKTLDYQKIFDNMQKPAFVFDGRNIVDADKLREIGFIVYSIGKPLDPWLKDMPA 478
>sp|Q9LIA8|UGDH1_ARATH Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidopsis thaliana GN=UGD1 PE=1 SV=1 Length = 480
Score = 214 bits (546), Expect = 2e-55 Identities = 91/120 (75%), Positives = 111/120 (92%) Frame = +1
Query: 1 QLSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCI 180 +LS+YDPQVT DQI RDL+MNKFDWDHP HLQPMSPTT KQV V WDAYEATK+AHG+CI Sbjct: 359 RLSIYDPQVTEDQIQRDLSMNKFDWDHPLHLQPMSPTTVKQVTVTWDAYEATKDAHGICI 418
Query: 181 LTEWDEFKKLDYKRIYDGMQKPAFIFDGRNVINVEELRKIGFIVYSVGKPLDPWVKDLPA 360 +TEWDEFK LD+++I+D MQKPAF+FDGRN++N+++LR+IGFIVYS+GKPLD W+KD+PA Sbjct: 419 MTEWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSIGKPLDDWLKDMPA 478
>sp|O02373|UGDH_DROME UDP-glucose 6-dehydrogenase OS=Drosophila melanogaster GN=sgl PE=2 SV=1 Length = 476
Score = 92.4 bits (228), Expect = 1e-18 Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQ-VDVVWDAYEATKNAHGVCI 180 L +YDP+V +QI+ DL HP + SP K+ V + D Y A + H + I Sbjct: 360 LDIYDPKVEPEQIIDDLT-------HPSVTE--SPEKVKKAVQIHSDPYSAVRATHALVI 410
Query: 181 LTEWDEFKKLDYKRIYDGMQKPAFIFDGRNVINVEELRKIGFIVYSVGK 327 TEWDEF LD+KRIY M KPA+IFDGR +++ E L++IGF V ++GK Sbjct: 411 CTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERLQQIGFHVQTIGK 459
>sp|Q5R7B3|UGDH_PONAB UDP-glucose 6-dehydrogenase OS=Pongo abelii GN=UGDH PE=2 SV=1 Length = 494
Score = 87.8 bits (216), Expect = 3e-17 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 2/123 (1%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 L +YDP+V +QI+ DL+ HP + ++ V + D YEA AH V I Sbjct: 364 LHIYDPKVPREQIVVDLS-------HPGVSE--DDQVSRLVTISKDPYEACDGAHAVVIC 414
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDLP 357 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K +P Sbjct: 415 TEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSS--KRIP 472
Query: 358 AAP 366 AP Sbjct: 473 YAP 475
>sp|O60701|UGDH_HUMAN UDP-glucose 6-dehydrogenase OS=Homo sapiens GN=UGDH PE=1 SV=1 Length = 494
Score = 87.8 bits (216), Expect = 3e-17 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 2/123 (1%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 L +YDP+V +QI+ DL+ HP + ++ V + D YEA AH V I Sbjct: 364 LHIYDPKVPREQIVVDLS-------HPGVSE--DDQVSRLVTISKDPYEACDGAHAVVIC 414
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDLP 357 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K +P Sbjct: 415 TEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSS--KRIP 472
Query: 358 AAP 366 AP Sbjct: 473 YAP 475
>sp|P12378|UGDH_BOVIN UDP-glucose 6-dehydrogenase OS=Bos taurus GN=UGDH PE=1 SV=2 Length = 494
Score = 87.0 bits (214), Expect = 6e-17 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 L +YDP+V +QI+ DL+ HP + + V + D YEA AH V I Sbjct: 364 LHIYDPKVPREQIVVDLS-------HPGVSK--DDQVARLVTISKDPYEACDGAHAVVIC 414
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDLP 357 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K +P Sbjct: 415 TEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSS--KRIP 472
Query: 358 AAP 366 AP Sbjct: 473 YAP 475
>sp|O70199|UGDH_RAT UDP-glucose 6-dehydrogenase OS=Rattus norvegicus GN=Ugdh PE=1 SV=1 Length = 493
Score = 84.7 bits (208), Expect = 3e-16 Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 2/123 (1%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 L +YDP+V +QI+ DL+ HP ++ V + D YEA AH + I Sbjct: 364 LHIYDPKVPREQIVVDLS-------HPG--VSADDQVSRLVTISKDPYEACDGAHALVIC 414
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDLP 357 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K +P Sbjct: 415 TEWDMFKELDYERIHKRMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSS--KRIP 472
Query: 358 AAP 366 P Sbjct: 473 YTP 475
>sp|O70475|UGDH_MOUSE UDP-glucose 6-dehydrogenase OS=Mus musculus GN=Ugdh PE=1 SV=1 Length = 493
Score = 84.7 bits (208), Expect = 3e-16 Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 2/123 (1%) Frame = +1
Query: 4 LSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCIL 183 L +YDP+V +QI+ DL+ HP ++ V + D YEA AH + I Sbjct: 364 LHIYDPKVPREQIVVDLS-------HPG--VSADDQVSRLVTISKDPYEACDGAHALVIC 414
Query: 184 TEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDLP 357 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K +P Sbjct: 415 TEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHSELQTIGFQIETIGKKVSS--KRIP 472
Query: 358 AAP 366 P Sbjct: 473 YTP 475
>sp|Q5F3T9|UGDH_CHICK UDP-glucose 6-dehydrogenase OS=Gallus gallus GN=UGDH PE=2 SV=1 Length = 494
Score = 84.7 bits (208), Expect = 3e-16 Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Frame = +1
Query: 1 QLSVYDPQVTADQIMRDLAMNKFDWDHPQHLQPMSPTTTKQVDVVWDAYEATKNAHGVCI 180 +L +YDP+V +QI+ DL+ D+ ++ V + D YEA AH + I Sbjct: 363 KLHIYDPKVPKEQIILDLSHPGVSEDNQ---------VSRLVTISQDPYEACDGAHALVI 413
Query: 181 LTEWDEFKKLDYKRIYDGMQKPAFIFDGRNVIN--VEELRKIGFIVYSVGKPLDPWVKDL 354 TEWD FK+LDY+RI+ M KPAFIFDGR V++ EL+ IGF + ++GK + K + Sbjct: 414 CTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDDLHNELQVIGFQIETIGKKVS--AKRI 471
Query: 355 PAA 363 P A Sbjct: 472 PFA 474
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPB2 |
Definition |
tr|B8LPB2|B8LPB2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
124 |
Score (bit) |
228.0 |
E-value |
1.0e-58 |
Report |
|