DK962311 |
Clone id |
TST39A01NGRL0013_I12 |
Library |
TST39 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_I12. 5' end sequence. |
Accession |
DK962311 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1709Contig1 |
Sequence |
GAGAATTAGTGGACCAGTGAATCTTTCCGAAAGAGCGAGCATTCCTATCCTGTAACTACT ATCAATCCGTCTCCTTCTTCGTCCTCGCAGAAACCCTAGTCTGCGCTATCTGGGTGAACC CGGAAACAGGATTTCGAATGGCTGCCCGAAACCCAGTGGGAAAGTCTAGCAATGCTCCAG TAAAGCTTAGGAAACCAGTATTTGTGAAGGTTGACCAGCTGCAGCCTGGTACTGCAGGAC ATACGCTCACCGTTAAAGTGGTGAGCTCAAAGACTGTTGTGCAGCGAGCTCGACCTATTG TTAGCAATACACGAAATGTACGAATTGCAGAATGTGTAGTGGGTGATGAAACAGGAACCA TTATATTTACAGCCAGAAATGAGCAGGTGGACATGATGAAGCCAGATGTGACTGTCATTC TTCGAAATGCAAAGATTGACATGTTCAAGGGTTGCATGCGGTTGGCTGTTGATAAATGGG GACGAGTGGAGGTTACTGAACCTGCCAAATTTGTTGTCAAAGAGGAGAACGATCTTTCAG GTGTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49453 |
Definition |
sp|O49453|Y4844_ARATH Uncharacterized protein At4g28440 OS=Arabidopsis thaliana |
Align length |
140 |
Score (bit) |
141.0 |
E-value |
2.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P929 |
Definition |
tr|A9P929|A9P929_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
140 |
Score (bit) |
171.0 |
E-value |
2.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962311|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_I12, 5' (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P929|A9P929_POPTR Putative uncharacterized protein OS=Popul... 171 2e-41 tr|A7PMA7|A7PMA7_VITVI Chromosome chr14 scaffold_21, whole genom... 170 4e-41 tr|A9TST7|A9TST7_PHYPA Predicted protein OS=Physcomitrella paten... 168 2e-40 tr|A9PCG5|A9PCG5_POPTR Putative uncharacterized protein OS=Popul... 165 2e-39 tr|A9NK64|A9NK64_PICSI Putative uncharacterized protein OS=Picea... 165 2e-39 tr|A7PJ85|A7PJ85_VITVI Chromosome chr12 scaffold_18, whole genom... 164 3e-39 tr|B6SHT0|B6SHT0_MAIZE OB-fold nucleic acid binding domain conta... 163 5e-39 tr|A7QPS6|A7QPS6_VITVI Chromosome chr10 scaffold_138, whole geno... 163 6e-39 tr|A5AJH4|A5AJH4_VITVI Putative uncharacterized protein OS=Vitis... 163 6e-39 tr|A7QNV6|A7QNV6_VITVI Chromosome chr1 scaffold_135, whole genom... 162 1e-38 tr|A9PCK0|A9PCK0_POPTR Putative uncharacterized protein OS=Popul... 161 2e-38 tr|A5C3Z4|A5C3Z4_VITVI Putative uncharacterized protein OS=Vitis... 161 2e-38 tr|A9NWD2|A9NWD2_PICSI Putative uncharacterized protein OS=Picea... 160 4e-38 tr|A2WML6|A2WML6_ORYSI Putative uncharacterized protein OS=Oryza... 160 5e-38 tr|Q9FTU2|Q9FTU2_ORYSJ cDNA clone:J033067D04, full insert sequen... 159 7e-38 tr|A5BEE0|A5BEE0_VITVI Putative uncharacterized protein OS=Vitis... 157 3e-37 tr|B4FR03|B4FR03_MAIZE OB-fold nucleic acid binding domain conta... 157 3e-37 tr|Q5JML8|Q5JML8_ORYSJ cDNA clone:J013108H01, full insert sequen... 157 5e-37 tr|Q5W707|Q5W707_ORYSJ Os05g0244600 protein OS=Oryza sativa subs... 156 8e-37 tr|Q45NM5|Q45NM5_MEDSA Putative uncharacterized protein (Fragmen... 156 8e-37 tr|B8A9R0|B8A9R0_ORYSI Putative uncharacterized protein OS=Oryza... 156 8e-37 tr|A2Y2A8|A2Y2A8_ORYSI Putative uncharacterized protein OS=Oryza... 156 8e-37 tr|A9T5G0|A9T5G0_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36 tr|B7FKB1|B7FKB1_MEDTR Putative uncharacterized protein OS=Medic... 154 2e-36 tr|A7Q767|A7Q767_VITVI Chromosome chr18 scaffold_59, whole genom... 149 7e-35 tr|Q9ZUC0|Q9ZUC0_ARATH F5O8.30 protein (Putative uncharacterized... 149 1e-34 tr|Q8RYC3|Q8RYC3_ARATH Expressed protein (Putative uncharacteriz... 149 1e-34 tr|A9PAP6|A9PAP6_POPTR Putative uncharacterized protein OS=Popul... 145 2e-33 tr|B4FT80|B4FT80_MAIZE OB-fold nucleic acid binding domain conta... 144 2e-33 tr|B4FSC5|B4FSC5_MAIZE OB-fold nucleic acid binding domain conta... 144 4e-33
>tr|A9P929|A9P929_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 155
Score = 171 bits (434), Expect = 2e-41 Identities = 89/140 (63%), Positives = 103/140 (73%), Gaps = 1/140 (0%) Frame = +3
Query: 123 ETGFRMAARNPVGKSSNAPVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIV 302 +T + S+ A LRKPVF+KVDQL+PGT GHTL Q+ R V Sbjct: 4 QTPIEQQESSSASASAGAKPGLRKPVFIKVDQLKPGTGGHTLTVKVLNFNTVPQKDRRSV 63
Query: 303 S-NTRNVRIAECVVGDETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKW 479 S + R RIAEC++GDETGTIIFTARN+QVD+MKP TVILRNAKIDMFKG MRLAVDKW Sbjct: 64 SLHVRQTRIAECLIGDETGTIIFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRLAVDKW 123
Query: 480 GRVEVTEPAKFVVKEENDLS 539 GRVEVTEPA+FVVKE+N+LS Sbjct: 124 GRVEVTEPAEFVVKEDNNLS 143
>tr|A7PMA7|A7PMA7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020747001 PE=4 SV=1 Length = 137
Score = 170 bits (431), Expect = 4e-41 Identities = 83/118 (70%), Positives = 94/118 (79%) Frame = +3
Query: 186 LRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVVGDETGTII 365 +RKPVF KVDQL+PGT+GHTL Q+ RP R +RIAEC+VGDETG I+ Sbjct: 8 MRKPVFTKVDQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMIV 67
Query: 366 FTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVKEENDLS 539 FTARN+QVD+MKPD TVILRNAKIDMFKG MRLAVDKWGRVEVTEPA F VKE+N+LS Sbjct: 68 FTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLS 125
>tr|A9TST7|A9TST7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110528 PE=4 SV=1 Length = 137
Score = 168 bits (425), Expect = 2e-40 Identities = 88/134 (65%), Positives = 100/134 (74%) Frame = +3
Query: 138 MAARNPVGKSSNAPVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRN 317 MA+ NP LRKPVFVKVDQL+PGTAGHTL Q+ARP + R Sbjct: 1 MASPNP---------SLRKPVFVKVDQLRPGTAGHTLTVKVVSTKLVLQKARPDGNQVRQ 51
Query: 318 VRIAECVVGDETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVT 497 VRIAEC+VGD+TG I+FTARN+QVD+MK VTVILRNAKIDMFKG MRLAVDKWGRVE+T Sbjct: 52 VRIAECLVGDDTGVIVFTARNDQVDLMKEGVTVILRNAKIDMFKGSMRLAVDKWGRVELT 111
Query: 498 EPAKFVVKEENDLS 539 E A FVVKE+N+ S Sbjct: 112 EAADFVVKEDNNFS 125
>tr|A9PCG5|A9PCG5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 153
Score = 165 bits (417), Expect = 2e-39 Identities = 85/128 (66%), Positives = 99/128 (77%), Gaps = 2/128 (1%) Frame = +3
Query: 162 KSSNAPVK--LRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAEC 335 +SSNA K LRKPVF KVD L+PGT GHTL + R + + R RIAEC Sbjct: 14 ESSNAGGKPGLRKPVFTKVDLLKPGTGGHTLTVKVLNSIAVLPKGRSVSHHLRQSRIAEC 73
Query: 336 VVGDETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFV 515 ++GD+TG+IIFTARNEQVD++KP TVILRNAKIDMFKG MRLAVDKWGRVEVTEPA+FV Sbjct: 74 LIGDDTGSIIFTARNEQVDLVKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFV 133
Query: 516 VKEENDLS 539 VKE+N+LS Sbjct: 134 VKEDNNLS 141
>tr|A9NK64|A9NK64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 140
Score = 165 bits (417), Expect = 2e-39 Identities = 83/125 (66%), Positives = 96/125 (76%) Frame = +3
Query: 165 SSNAPVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVVG 344 +SN LRKPVF K+DQL+PGT+GH L Q+ RP S R +RIAEC++G Sbjct: 5 NSNPNANLRKPVFTKIDQLRPGTSGHNLIVKVTSAKIVLQKGRPD-SQVRQMRIAECLIG 63
Query: 345 DETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVKE 524 DETG +IFTARNEQVD+MK TVILRNAKIDMFKG MRLAVDKWGR+EVTEPA+F VKE Sbjct: 64 DETGIVIFTARNEQVDLMKEGSTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAEFSVKE 123
Query: 525 ENDLS 539 EN+LS Sbjct: 124 ENNLS 128
>tr|A7PJ85|A7PJ85_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018634001 PE=4 SV=1 Length = 148
Score = 164 bits (415), Expect = 3e-39 Identities = 83/122 (68%), Positives = 93/122 (76%) Frame = +3
Query: 174 APVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVVGDET 353 A + RKPVF KVDQL+PGT GHTL Q+ R + + R+ RIAEC+VGDET Sbjct: 15 AVTEKRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLRHTRIAECLVGDET 74
Query: 354 GTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVKEEND 533 G IIFTARN+QVDMMK TVILRNAKIDMFKG MRLAVDKWGRVEVTE A FVVKE+N+ Sbjct: 75 GAIIFTARNDQVDMMKAGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEDANFVVKEQNN 134
Query: 534 LS 539 LS Sbjct: 135 LS 136
>tr|B6SHT0|B6SHT0_MAIZE OB-fold nucleic acid binding domain containing protein OS=Zea mays PE=2 SV=1 Length = 146
Score = 163 bits (413), Expect = 5e-39 Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 3/121 (2%) Frame = +3
Query: 186 LRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARP---IVSNTRNVRIAECVVGDETG 356 LRKPVF KVDQL+PGT GHTL RARP +++R RIAEC+VGDETG Sbjct: 15 LRKPVFTKVDQLKPGTNGHTLTVKVVSATPVPGRARPGAPAAASSRAPRIAECLVGDETG 74
Query: 357 TIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVKEENDL 536 I+FTARN+QVD++KPD TVILRNAKIDMFKG MRLAVDKWGR+E TEPA F VKE+N+L Sbjct: 75 VIVFTARNDQVDLLKPDATVILRNAKIDMFKGSMRLAVDKWGRIEATEPASFTVKEDNNL 134
Query: 537 S 539 S Sbjct: 135 S 135
>tr|A7QPS6|A7QPS6_VITVI Chromosome chr10 scaffold_138, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003057001 PE=4 SV=1 Length = 149
Score = 163 bits (412), Expect = 6e-39 Identities = 81/126 (64%), Positives = 98/126 (77%) Frame = +3
Query: 162 KSSNAPVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVV 341 + S+ P+ +RKPVF KV QL+PGT+GHTL + R N R+ IAEC++ Sbjct: 13 QGSSKPM-MRKPVFTKVYQLKPGTSGHTLIANVLSSNTVLHKGRAAPQNLRHTCIAECLI 71
Query: 342 GDETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVK 521 GDETGTIIFTARN+QVD+MKP+ TVI+RNAKIDMFKG MRLAVDKWGRVE TEPAKFVVK Sbjct: 72 GDETGTIIFTARNDQVDLMKPETTVIIRNAKIDMFKGSMRLAVDKWGRVEATEPAKFVVK 131
Query: 522 EENDLS 539 ++N+LS Sbjct: 132 KDNNLS 137
>tr|A5AJH4|A5AJH4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005066 PE=4 SV=1 Length = 149
Score = 163 bits (412), Expect = 6e-39 Identities = 81/126 (64%), Positives = 98/126 (77%) Frame = +3
Query: 162 KSSNAPVKLRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVV 341 + S+ P+ +RKPVF KV QL+PGT+GHTL + R N R+ IAEC++ Sbjct: 13 QGSSKPM-MRKPVFTKVYQLKPGTSGHTLIANVLSSNTVLHKGRAAPQNXRHTCIAECLI 71
Query: 342 GDETGTIIFTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVK 521 GDETGTIIFTARN+QVD+MKP+ TVI+RNAKIDMFKG MRLAVDKWGRVE TEPAKFVVK Sbjct: 72 GDETGTIIFTARNDQVDLMKPETTVIIRNAKIDMFKGSMRLAVDKWGRVEATEPAKFVVK 131
Query: 522 EENDLS 539 ++N+LS Sbjct: 132 KDNNLS 137
>tr|A7QNV6|A7QNV6_VITVI Chromosome chr1 scaffold_135, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002689001 PE=4 SV=1 Length = 137
Score = 162 bits (409), Expect = 1e-38 Identities = 80/118 (67%), Positives = 92/118 (77%) Frame = +3
Query: 186 LRKPVFVKVDQLQPGTAGHTLXXXXXXXXXXXQRARPIVSNTRNVRIAECVVGDETGTII 365 LRKPVF K++QL+PGT+GHTL Q+ RP R +RIAEC+VGDETG II Sbjct: 8 LRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMII 67
Query: 366 FTARNEQVDMMKPDVTVILRNAKIDMFKGCMRLAVDKWGRVEVTEPAKFVVKEENDLS 539 FTARN+QVD+MK TV+LRNAKIDMFKG MRLAVDKWGRVEVTEPA F VKE+N+LS Sbjct: 68 FTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLS 125
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