DK962327 |
Clone id |
TST39A01NGRL0013_J05 |
Library |
TST39 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_J05. 5' end sequence. |
Accession |
DK962327 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
AGAAAACGGCCCTCAATTCTTGCGCTCTCGCGCCAAAAGCTCCCCCATCTACCTGGGACA TCTATTGAAGGAGTAGAGAAAGGAGGCTATACCATCAGTTGCAACGCTTCTGGAAACAAG CCTGACTTGATCCTCTTCGGAACAGGATCTGAACTAGAGATTGCCTACAAAGCAGCCGAA GTCATCAGGAAGGAGGGCAAAACTGTGAGAGTTGTCTCAATGGTATCATGGGAGTTGTTT GAAGAACAAAGTGCTGAATACAAAGAGAGTGTTATCCCTGCAGCCGTGACTTCCAGAGTG AGTGTCGAAGCTGGTTCTACATTCGGTTGGGAGAAGTATGTAGGCTCCAAAGGCAAAGCA ATAGGCATTGACCACTTTGGTGCCAGTGCACCTGCTGGTACCATCTACAAAAAGTTTGGT TTGACTGTGGACAATGTGGTTGCCAATGCCAAGGAGGTGATGTAAATATACTTTTGTATT TACTCTGCAGTTTTGTAGTAATAACCTAATTGATTTGAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
151 |
Score (bit) |
252.0 |
E-value |
8.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962327|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_J05, 5' (517 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 252 8e-67 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 244 2e-64 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 235 1e-61 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 234 2e-61 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 216 7e-56 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 214 2e-55 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 176 8e-44 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 147 4e-35 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 146 5e-35 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 144 2e-34 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 143 5e-34 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 142 1e-33 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 141 2e-33 sp|Q7MDD4|TKT2_VIBVY Transketolase 2 OS=Vibrio vulnificus (strai... 141 2e-33 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 140 3e-33 sp|Q7MHK7|TKT1_VIBVY Transketolase 1 OS=Vibrio vulnificus (strai... 140 3e-33 sp|Q87GY4|TKT2_VIBPA Transketolase 2 OS=Vibrio parahaemolyticus ... 140 4e-33 sp|Q9KLW7|TKT2_VIBCH Transketolase 2 OS=Vibrio cholerae GN=tkt2 ... 140 5e-33 sp|Q9KUP2|TKT1_VIBCH Transketolase 1 OS=Vibrio cholerae GN=tkt1 ... 140 5e-33 sp|Q8D6H8|TKT2_VIBVU Transketolase 2 OS=Vibrio vulnificus GN=tkt... 139 6e-33 sp|Q8DCA2|TKT1_VIBVU Transketolase 1 OS=Vibrio vulnificus GN=tkt... 139 6e-33 sp|Q87LK8|TKT1_VIBPA Transketolase 1 OS=Vibrio parahaemolyticus ... 138 2e-32 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 135 9e-32 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 133 4e-31 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 132 1e-30
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 252 bits (643), Expect = 8e-67 Identities = 122/151 (80%), Positives = 142/151 (94%) Frame = +1
Query: 1 RKRPSILALSRQKLPHLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAE 180 RKRPSILALSRQKLPHLPGTSIEGVEKGGYTIS N++GNKPDLI+ GTGSELEIA KAA+ Sbjct: 523 RKRPSILALSRQKLPHLPGTSIEGVEKGGYTISDNSTGNKPDLIVMGTGSELEIAAKAAD 582
Query: 181 VIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKA 360 +RKEGKTVRVVS VSWELF+EQS EYKESV+PAAVT+R+S+EAGST GW+KYVG++GKA Sbjct: 583 ELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTLGWQKYVGAQGKA 642
Query: 361 IGIDHFGASAPAGTIYKKFGLTVDNVVANAK 453 IGID FGASAPAGTIYK++G+TV++++A AK Sbjct: 643 IGIDKFGASAPAGTIYKEYGITVESIIAAAK 673
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 244 bits (622), Expect = 2e-64 Identities = 122/153 (79%), Positives = 138/153 (90%) Frame = +1
Query: 4 KRPSILALSRQKLPHLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEV 183 KRPS+LALSRQKLP LPGTSIEGVEKGGY IS N+SGNKPD+IL GTGSELEIA KA EV Sbjct: 367 KRPSVLALSRQKLPQLPGTSIEGVEKGGYVISDNSSGNKPDVILIGTGSELEIAAKAGEV 426
Query: 184 IRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAI 363 +RKEGK VRVVS VSWELF+EQS EYKESV+P++VT+RVS+EAGSTFGW K VGSKGKAI Sbjct: 427 LRKEGKGVRVVSFVSWELFDEQSKEYKESVLPSSVTARVSIEAGSTFGWGKIVGSKGKAI 486
Query: 364 GIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 462 GID FGASAPAG IY++FG+TV+ VVA AKE++ Sbjct: 487 GIDRFGASAPAGKIYEEFGITVEAVVAAAKELI 519
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 235 bits (599), Expect = 1e-61 Identities = 118/153 (77%), Positives = 135/153 (88%) Frame = +1
Query: 1 RKRPSILALSRQKLPHLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAE 180 RK PSILALSR+KLP+LPGTSIEGVEKGGYTI+ N+SGNKPD+IL GTGSELEIA KA + Sbjct: 588 RKTPSILALSRKKLPNLPGTSIEGVEKGGYTITDNSSGNKPDVILIGTGSELEIAAKAGD 647
Query: 181 VIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKA 360 +RKEGK VRVVS VSWELFE+QS EYKESV+P+ VT+RVS+EAGSTFGW K VGSKGKA Sbjct: 648 ELRKEGKAVRVVSFVSWELFEKQSDEYKESVLPSDVTARVSIEAGSTFGWHKIVGSKGKA 707
Query: 361 IGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 459 IGID FGASAPAG IY+++G+TV+ VV AK V Sbjct: 708 IGIDKFGASAPAGKIYQEYGITVEAVVEAAKSV 740
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 234 bits (596), Expect = 2e-61 Identities = 116/153 (75%), Positives = 134/153 (87%) Frame = +1
Query: 1 RKRPSILALSRQKLPHLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAE 180 RK PSILALSRQKLP L GTSIEG KGGY +S N+SGNKPD+IL GTGSELEIA KAAE Sbjct: 588 RKTPSILALSRQKLPQLAGTSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAE 647
Query: 181 VIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKA 360 ++KEGKTVRVVS V WEL++EQSAEYKESV+P++VT+RVS+EAGSTFGW+K+VG KGKA Sbjct: 648 ELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKA 707
Query: 361 IGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 459 IGID FGASAPA IYK+FG+T + VVA AK+V Sbjct: 708 IGIDGFGASAPADKIYKEFGITAEAVVAAAKQV 740
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 216 bits (549), Expect = 7e-56 Identities = 106/154 (68%), Positives = 131/154 (85%), Gaps = 2/154 (1%) Frame = +1
Query: 4 KRPSILALSRQKLPHLPGTSIEGVEKGGYTISCNASG--NKPDLILFGTGSELEIAYKAA 177 +RPSIL L+RQKLP LPGTSIEGV KGGY IS N+ G +KPD+IL GTGSELEIA +A Sbjct: 522 ERPSILVLARQKLPQLPGTSIEGVSKGGYVISDNSRGGNSKPDVILIGTGSELEIAARAG 581
Query: 178 EVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGK 357 + +RKEGK VRVVS+V WELF EQS +Y+E+V+P+ VT+RVSVEAGSTFGWE+++G KGK Sbjct: 582 DELRKEGKKVRVVSLVCWELFAEQSEKYRETVLPSGVTARVSVEAGSTFGWERFIGPKGK 641
Query: 358 AIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 459 A+GID FGASAPA ++K+FG+TV+ VVA AKE+ Sbjct: 642 AVGIDRFGASAPAERLFKEFGITVEAVVAAAKEI 675
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 214 bits (545), Expect = 2e-55 Identities = 108/152 (71%), Positives = 129/152 (84%), Gaps = 1/152 (0%) Frame = +1
Query: 7 RPSILALSRQKLPHLPGTSIEGVEKGGYTISCNAS-GNKPDLILFGTGSELEIAYKAAEV 183 RPSIL+LSRQKLP LPGTS+EGV +GGY IS N+ G KP++IL GTGSELEIA +A E Sbjct: 527 RPSILSLSRQKLPQLPGTSVEGVGRGGYVISDNSKDGEKPEVILMGTGSELEIAARAGEE 586
Query: 184 IRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAI 363 +RKEGK VRVVS+VSWELF EQS EYKE V+P+ VT+RVSVEAGSTFGWE++VG KG+A+ Sbjct: 587 LRKEGKKVRVVSLVSWELFGEQSKEYKEMVLPSEVTARVSVEAGSTFGWERFVGLKGRAV 646
Query: 364 GIDHFGASAPAGTIYKKFGLTVDNVVANAKEV 459 GID FGASA A +YK+FG+TV+ VVA AKE+ Sbjct: 647 GIDRFGASASAERLYKEFGITVEAVVAAAKEL 678
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 176 bits (445), Expect = 8e-44 Identities = 85/151 (56%), Positives = 113/151 (74%) Frame = +1
Query: 10 PSILALSRQKLPHLPGTSIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYKAAEVIR 189 P++LA +RQ +P+L GTSI+ V KGGY + + PDLIL GTGSEL + AAE ++ Sbjct: 521 PTLLAFTRQNVPNLAGTSIDDVAKGGYIVV--DTDGTPDLILIGTGSELSLCVTAAEKLK 578
Query: 190 KEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKAIGI 369 EGK VRVVS+ +W+LF+ Q A YKESV+P AVT R++VEA S+FGW KY+GS+G A+ I Sbjct: 579 AEGKKVRVVSLAAWDLFDAQDAAYKESVLPKAVTKRLAVEAASSFGWHKYIGSEGDAVTI 638
Query: 370 DHFGASAPAGTIYKKFGLTVDNVVANAKEVM 462 D FGASAP G +KFG +VDNV+A AK+++ Sbjct: 639 DRFGASAPGGVCLEKFGFSVDNVLAKAKQLL 669
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 147 bits (370), Expect = 4e-35 Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 3/157 (1%) Frame = +1
Query: 1 RKRPSILALSRQKLPHLPGT---SIEGVEKGGYTISCNASGNKPDLILFGTGSELEIAYK 171 + +P+ L LSRQ LP L G + +GV KG Y ++ + DL+L +GSE+ +A Sbjct: 509 KDQPTALVLSRQNLPTLEGAVDRAYDGVSKGAYVLA--PANGSADLLLLASGSEVSLAVN 566
Query: 172 AAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSK 351 A E + KEG VVSM SW+ FE QSAEYKE V+P+ VT+R+++E GS+ GW KYVG++ Sbjct: 567 AKEALEKEGIHAAVVSMPSWDRFEAQSAEYKEEVLPSDVTARLAIEMGSSLGWAKYVGNQ 626
Query: 352 GKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 462 G + ID FGASAP I ++FG TV +VVA AK ++ Sbjct: 627 GDVVAIDRFGASAPGERIMEEFGFTVQHVVARAKALL 663
>sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1 Length = 668
Score = 146 bits (369), Expect = 5e-35 Identities = 76/157 (48%), Positives = 108/157 (68%), Gaps = 3/157 (1%) Frame = +1
Query: 1 RKRPSILALSRQKLPHLPGTS--IEGVEKGGYTIS-CNASGNKPDLILFGTGSELEIAYK 171 ++ PS L +RQ L + T+ + V +GGY + C + N PDLIL TGSE+E+A K Sbjct: 512 KEGPSALIFTRQNLAQMDRTAEQLANVARGGYVLRHCCENQNCPDLILIATGSEVELAMK 571
Query: 172 AAEVIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSK 351 AA+V+ EG VRVVSM S +F++Q A Y+ESV+P+ +T RV++EAG W KYVG + Sbjct: 572 AADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITKRVAIEAGIADFWYKYVGFE 631
Query: 352 GKAIGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 462 G+ +G++ FG SAPA ++K FG TV+NVVA AKE++ Sbjct: 632 GRVVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL 668
>sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=tktA PE=3 SV=1 Length = 665
Score = 144 bits (363), Expect = 2e-34 Identities = 77/154 (50%), Positives = 105/154 (68%), Gaps = 3/154 (1%) Frame = +1
Query: 10 PSILALSRQKLPHLPGTS--IEGVEKGGYTIS-CNASGNKPDLILFGTGSELEIAYKAAE 180 PS L +RQ L + TS ++ V++G Y + C+ + P+LI TGSE+E+A +AAE Sbjct: 515 PSALIFTRQNLAQMDRTSAQLDAVKRGAYVLKDCDGT---PELIFIATGSEVELAVQAAE 571
Query: 181 VIRKEGKTVRVVSMVSWELFEEQSAEYKESVIPAAVTSRVSVEAGSTFGWEKYVGSKGKA 360 + EGK VRVVSM S F++Q A Y+ESV+PAAVT RV++EAG W KYVG G+ Sbjct: 572 ALSAEGKKVRVVSMPSTNRFDKQDAAYRESVLPAAVTKRVAIEAGIADFWYKYVGFNGRV 631
Query: 361 IGIDHFGASAPAGTIYKKFGLTVDNVVANAKEVM 462 IG++ FG SAPA ++K FG TV+NVVA AKE++ Sbjct: 632 IGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL 665
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7ZYI1 |
Definition |
tr|B7ZYI1|B7ZYI1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
151 |
Score (bit) |
251.0 |
E-value |
2.0e-65 |
Report |
|