Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962328|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_J06, 5' (541 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 213 5e-55 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 203 4e-52 sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 92 1e-18 sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 89 1e-17 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 86 2e-16 sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 85 2e-16 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 84 6e-16 sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 84 6e-16 sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 83 1e-15 sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 83 1e-15 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 83 1e-15 sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 83 1e-15 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 83 1e-15 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 83 1e-15 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 83 1e-15 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 83 1e-15 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 83 1e-15 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 83 1e-15 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 83 1e-15 sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 1e-15 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 83 1e-15 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 83 1e-15 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 82 2e-15 sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chlorop... 82 2e-15 sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chlorop... 82 2e-15 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 82 2e-15 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 82 2e-15 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 82 2e-15 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 82 2e-15 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 82 2e-15
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 213 bits (542), Expect = 5e-55 Identities = 97/147 (65%), Positives = 113/147 (76%) Frame = +1
Query: 7 LAVPGILLPEALGLGNWVDAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXL 186 L VPG+L+PEALGLGNWV AQ+WAA P G ATYLGNPVPWGNL Sbjct: 96 LCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQ 155
Query: 187 RNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 366 R E DPE++KYPGG FDPLGFSKD KFEE K+KE+KNGRLA++AFVGF +Q +AYPGT Sbjct: 156 RTMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGT 215
Query: 367 GPLENLATHLADPWSKNISEVLIPRSV 447 GPLENLATHLADPW NI +++IPR++ Sbjct: 216 GPLENLATHLADPWHNNIGDIVIPRNI 242
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 203 bits (517), Expect = 4e-52 Identities = 95/147 (64%), Positives = 110/147 (74%) Frame = +1
Query: 7 LAVPGILLPEALGLGNWVDAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXL 186 LAVPGI++PEALGLGNWV AQ+WAA PGG ATYLG PVPWG L Sbjct: 97 LAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQ 156
Query: 187 RNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 366 R+ E D E++KYPGG FDPLG+SKD KFEE KVKE+KNGRLAL+A VGF +Q +AY GT Sbjct: 157 RSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGT 216
Query: 367 GPLENLATHLADPWSKNISEVLIPRSV 447 GPLENLATHLADPW NI +V+IP+ + Sbjct: 217 GPLENLATHLADPWHNNIGDVIIPKGI 243
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2 SV=1 Length = 290
Score = 92.4 bits (228), Expect = 1e-18 Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Frame = +1
Query: 7 LAVPGILLPEALGLGNWVDAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXL 186 LA G L E L W DA K G ++YLG P+P+ ++ Sbjct: 149 LATLGALSVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQ 205
Query: 187 RNEENDPERRKYPGGPF-DPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPG 363 RN E D E+R YPGG F DPLG + D +K + ++ E+K+ RLA++AF+GFA+QAAA G Sbjct: 206 RNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAA-TG 264
Query: 364 TGPLENLATHLADP 405 GPL N ATHL+DP Sbjct: 265 KGPLNNWATHLSDP 278
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1 Length = 287
Score = 89.4 bits (220), Expect = 1e-17 Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 1/134 (0%) Frame = +1
Query: 7 LAVPGILLPEALGLGNWVDAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXL 186 LA G + E L W DA K G ++YLG P+P+ ++ Sbjct: 146 LATLGAITVEWLTGVTWQDAGKVELVDG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQ 202
Query: 187 RNEENDPERRKYPGGPF-DPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPG 363 RN E D E+R YPGG F DPLG + D K + ++ E+K+ RLA++ F+GFA+QAAA G Sbjct: 203 RNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAA-TG 261
Query: 364 TGPLENLATHLADP 405 GPL N ATHL+DP Sbjct: 262 KGPLNNWATHLSDP 275
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1 Length = 280
Score = 85.5 bits (210), Expect = 2e-16 Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 7/149 (4%) Frame = +1
Query: 7 LAVPGILLPEALGL--GNWVDAQKWAAT-----PGGHATYLGNPVPWGNLXXXXXXXXXX 165 L G ++PEAL N W T G Y G +P + Sbjct: 123 LGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLL 182
Query: 166 XXXXXXLRNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQ 345 D E + +PGGPFDPLG +KD ++ KVKE+KNGRLA+ A +GF IQ Sbjct: 183 GGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQ 242
Query: 346 AAAYPGTGPLENLATHLADPWSKNISEVL 432 A G GP+ENLA HL+DP+ N+ V+ Sbjct: 243 AYV-TGEGPVENLAKHLSDPFGNNLLTVI 270
Score = 31.2 bits (69), Expect = 3.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1
Query: 235 FDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAA 351 +DP G K + F +Y+ EL + R A++ GF I A Sbjct: 95 YDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2 SV=1 Length = 276
Score = 85.1 bits (209), Expect = 2e-16 Identities = 53/128 (41%), Positives = 72/128 (56%) Frame = +1
Query: 7 LAVPGILLPEALGLGNWVDAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXL 186 L G + EAL W DA K G ++YLG P+P+ +L Sbjct: 150 LGTLGAIAVEALTGIAWQDAGKVELVEG--SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQ 206
Query: 187 RNEENDPERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGT 366 RN E DPE+R YPGG FDPLG + D +K + K+ E+K+ RLA++AF+ FA+Q AA+ G Sbjct: 207 RNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQ-AAFTGK 265
Query: 367 GPLENLAT 390 GP+ LAT Sbjct: 266 GPVSFLAT 273
>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1 Length = 267
Score = 83.6 bits (205), Expect = 6e-16 Identities = 58/147 (39%), Positives = 71/147 (48%), Gaps = 8/147 (5%) Frame = +1
Query: 1 VGLAVPGILLPEALGLGN--WVDAQKWAATPGGHATYLGNP--VPWGNLXXXXXXXXXXX 168 +G P +L + G W A + GG YLGNP V ++ Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSDGG-LDYLGNPSLVHAQSILAIWATQVILM 169
Query: 169 XXXXXLRNEENDP----ERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGF 336 R N P E YPGG FDPLG + D + F E KVKELKNGRLA+ + GF Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGF 229
Query: 337 AIQAAAYPGTGPLENLATHLADPWSKN 417 +QA G GP+ENLA HLADP + N Sbjct: 230 FVQAIV-TGKGPIENLADHLADPVNNN 255
>sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1 Length = 267
Score = 83.6 bits (205), Expect = 6e-16 Identities = 58/147 (39%), Positives = 71/147 (48%), Gaps = 8/147 (5%) Frame = +1
Query: 1 VGLAVPGILLPEALGLGN--WVDAQKWAATPGGHATYLGNP--VPWGNLXXXXXXXXXXX 168 +G P +L + G W A + GG YLGNP V ++ Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSDGG-LDYLGNPSLVHAQSILAIWATQVILM 169
Query: 169 XXXXXLRNEENDP----ERRKYPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGF 336 R N P E YPGG FDPLG + D + F E KVKELKNGRLA+ + GF Sbjct: 170 GAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGF 229
Query: 337 AIQAAAYPGTGPLENLATHLADPWSKN 417 +QA G GP+ENLA HLADP + N Sbjct: 230 FVQAIV-TGKGPIENLADHLADPVNNN 255
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1 Length = 116
Score = 82.8 bits (203), Expect = 1e-15 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 220 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 399 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 98
Query: 400 DPWSKN 417 DP + N Sbjct: 99 DPVNNN 104
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1 Length = 265
Score = 82.8 bits (203), Expect = 1e-15 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +1
Query: 220 YPGGPFDPLGFSKDVKKFEEYKVKELKNGRLALIAFVGFAIQAAAYPGTGPLENLATHLA 399 YPGG FDPLG ++D + F E KVKE+KNGRLA+ + GF +QA G GPLENLA HLA Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 247
Query: 400 DPWSKN 417 DP + N Sbjct: 248 DPVNNN 253
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