NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962329
Clone id TST39A01NGRL0013_J07
Library
Length 616
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_J07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCATTCTCTCCTCCCTTTATCTCTTCCTCTCTGGCTCTCGATCTGGAGAAGTTAGAGCT
CTCCATAGCTCTCTCCTCTCTGCGTGCTTGAGCCAGCTCATTTTAGAAAACACAAAAAAT
ACCCGACTTCCGTTCTTCCCTCCGTTAATTTTTAGGGTATATCATCTCTCGCTCGCTCTA
CTTCATTCTCTTCCTCGTTACAAGAAAAATCAGCCTTCTGATTTGCAGAATCCCCAGCTT
CCTTCTGCAGAGAAGAAGAGACAGGTAGCAGGTTTGCAGCTTCATAGAAAAGAAATCAAA
ATCACTTCCAGGTTACCATGGCTCAGATGGTGCAGCAAAATCAACAACAAGTTCCTGCAA
TGGCAATTCCTGCCCCAAGTCCTTACATGACAAACTCTTTATATGTGGGAGACCTTGATC
CCAATGTCAATGAAGCACAGCTGTATGAAGTGTTTACAAGTGTCGGGCAAGTGCTGTCTA
TTAGGGTTTGCCGGGACTTGTTAACAAAGAGATCCCTTGGTTATGCCTATGTGAATTACA
GCAACATACCAGACGCTACCCGTGCTATGGAGGTGTTGAACTTCACTGAGGTGAATGGCA
AACTAATGCGCATCAT
■■Homology search results ■■ -
sp_hit_id Q0CR95
Definition sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624)
Align length 82
Score (bit) 105.0
E-value 2.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962329|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J07, 5'
         (616 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ...   105   2e-22
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ...   105   2e-22
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ...   105   2e-22
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ...   104   4e-22
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ...   104   4e-22
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ...   103   5e-22
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ...   102   2e-21
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...   100   5e-21
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ...   100   8e-21
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ...   100   8e-21
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...   100   1e-20
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...    99   2e-20
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop...    98   4e-20
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no...    98   4e-20
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus...    98   4e-20
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa...    98   4e-20
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau...    98   4e-20
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ...    97   7e-20
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ...    97   9e-20
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a...    96   1e-19
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ...    96   2e-19
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa...    96   2e-19
sp|Q5JQF8|PAP1M_HUMAN Polyadenylate-binding protein 1-like 2 OS=...    95   3e-19
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ...    95   3e-19
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ...    94   6e-19
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop...    94   7e-19
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ...    93   1e-18
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ...    93   1e-18
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ...    93   1e-18
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ...    93   1e-18

>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
           PE=3 SV=1
          Length = 753

 Score =  105 bits (262), Expect = 2e-22
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P+ S   + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 40  PSTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 99

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + GK  RI
Sbjct: 100 ADGERALEDLNYTLIKGKPCRI 121



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 195

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 196 VNGMLLNDK 204



 Score = 31.2 bits (69), Expect = 4.4
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRS 515
           S Y   +LYV +L  ++++ +L E+F   G + S +V RD   +R+
Sbjct: 327 SKYQGVNLYVKNLTDDIDDEKLREMFAPYGTITSAKVMRDTNIERT 372


>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
           A1513) GN=pab1 PE=3 SV=1
          Length = 731

 Score =  105 bits (262), Expect = 2e-22
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           PA +   + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 46  PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + GK  RI
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI 127



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 201

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 202 VNGMLLNDK 210



 Score = 30.4 bits (67), Expect = 7.5
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKR 512
           S Y   +LYV +L  ++++ +L E+F   G + S +V RD   +R
Sbjct: 333 SKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTNVER 377


>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
          Length = 753

 Score =  105 bits (262), Expect = 2e-22
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P+ S   + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 44  PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + GK  RI
Sbjct: 104 ADGERALEDLNYTLIKGKPCRI 125



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 200 VNGMLLNDK 208



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLT 506
           S Y   +LYV +L  +V++ +L E+F+  G + S +V RD +T
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373


>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
           3700 / NRRL 181) GN=pab1 PE=3 SV=1
          Length = 751

 Score =  104 bits (259), Expect = 4e-22
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P+ +   + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 44  PSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + GK  RI
Sbjct: 104 ADGERALEDLNYTLIKGKPCRI 125



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 200 VNGMLLNDK 208



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLT 506
           S Y   +LYV +L  +V++ +L E+F+  G + S +V RD +T
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373


>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
          Length = 765

 Score =  104 bits (259), Expect = 4e-22
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P  S   + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 41  PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + GK  RI
Sbjct: 101 ADGERALEDLNYTLIKGKPCRI 122



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 196

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 197 VNGMLLNDK 205



 Score = 30.8 bits (68), Expect = 5.8
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRS 515
           S Y   +LYV +L  +V++ +L E+F   G + S +V RD   +R+
Sbjct: 328 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDTNIERT 373


>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
          Length = 754

 Score =  103 bits (258), Expect = 5e-22
 Identities = 49/73 (67%), Positives = 60/73 (82%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N  D  RA+E 
Sbjct: 52  SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111

Query: 576 LNFTEVNGKLMRI 614
           LN+T + GK  RI
Sbjct: 112 LNYTLIKGKPCRI 124



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 21/66 (31%), Positives = 39/66 (59%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++Y+ ++DP+V E +  ++F   G++ S  + RD   K S G+ +VNYS    A  A++ 
Sbjct: 233 NIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGK-SRGFGFVNYSTHESAQAAVDE 291

Query: 576 LNFTEV 593
           ++  EV
Sbjct: 292 MHDKEV 297



 Score = 37.7 bits (86), Expect = 0.047
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 198

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 199 VNGMLLNDK 207



 Score = 30.0 bits (66), Expect = 9.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 378 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRD 497
           S Y   +LYV +L  +V++ +L E+F   G + S +V RD
Sbjct: 330 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 369


>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
          Length = 768

 Score =  102 bits (253), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P   P+   SLYVG+LDP+V EA L+E+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N 
Sbjct: 48  PTAQPHSA-SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            D  RA+E LN+T + G+  RI
Sbjct: 107 ADGERALEDLNYTLIKGRPCRI 128



 Score = 37.4 bits (85), Expect = 0.062
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A  A++ 
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKH 202

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 203 VNGMLLNDK 211



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 366 IPAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRD 497
           I   S Y   +LY+ +L  ++++ +L E+F+S G + S +V RD
Sbjct: 331 IEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374


>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1
          Length = 783

 Score =  100 bits (250), Expect = 5e-21
 Identities = 46/81 (56%), Positives = 62/81 (76%)
 Frame = +3

Query: 372 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 551
           AP P  + SLYVG+LDP+V EA L+E+F+ +G V SIRVCRD +T+RSLGYAYVNY++  
Sbjct: 58  APHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTS 117

Query: 552 DATRAMEVLNFTEVNGKLMRI 614
           D  +A+E LN+T + G+  RI
Sbjct: 118 DGEKALEELNYTLIKGRPCRI 138



 Score = 36.6 bits (83), Expect = 0.11
 Identities = 19/69 (27%), Positives = 39/69 (56%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A +A++ 
Sbjct: 154 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAAAQAIKH 212

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 213 VNNMLLNEK 221


>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
          Length = 764

 Score =  100 bits (248), Expect = 8e-21
 Identities = 46/81 (56%), Positives = 61/81 (75%)
 Frame = +3

Query: 372 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 551
           AP P  + SLYVG+LDP+V EA L+E+F+ +G V SIRVCRD +T+RSLGYAYVNY+   
Sbjct: 53  APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 112

Query: 552 DATRAMEVLNFTEVNGKLMRI 614
           D  +A+E LN+T + G+  RI
Sbjct: 113 DGEKALEELNYTLIKGRPCRI 133



 Score = 37.4 bits (85), Expect = 0.062
 Identities = 21/78 (26%), Positives = 42/78 (53%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           PA       ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y   
Sbjct: 140 PALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-HGNSKGYGFVHYETD 198

Query: 549 PDATRAMEVLNFTEVNGK 602
             A++A++ +N   +N K
Sbjct: 199 EAASQAIKHVNGMLLNEK 216



 Score = 37.4 bits (85), Expect = 0.062
 Identities = 20/69 (28%), Positives = 39/69 (56%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++YV +++  V + +  E+F   G+V S  + RD   K S G+ +VN++    A +A++ 
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGK-SRGFGFVNFTTHEAAAQAVDE 300

Query: 576 LNFTEVNGK 602
           LN  +  G+
Sbjct: 301 LNGKDFRGQ 309


>sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1
          Length = 762

 Score =  100 bits (248), Expect = 8e-21
 Identities = 46/81 (56%), Positives = 61/81 (75%)
 Frame = +3

Query: 372 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 551
           AP P  + SLYVG+LDP+V EA L+E+F+ +G V SIRVCRD +T+RSLGYAYVNY+   
Sbjct: 54  APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 113

Query: 552 DATRAMEVLNFTEVNGKLMRI 614
           D  +A+E LN+T + G+  RI
Sbjct: 114 DGEKALEELNYTLIKGRPCRI 134



 Score = 37.0 bits (84), Expect = 0.081
 Identities = 19/69 (27%), Positives = 40/69 (57%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           ++++ +LD  ++   L++ F + G +LS +V +D     S GY +V+Y     A++A++ 
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-NGNSKGYGFVHYETDEAASQAIKH 208

Query: 576 LNFTEVNGK 602
           +N   +N K
Sbjct: 209 VNGMLLNEK 217
tr_hit_id A9S663
Definition tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 82
Score (bit) 128.0
E-value 3.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962329|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J07, 5'
         (616 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten...   128   3e-28
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten...   122   2e-26
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten...   122   2e-26
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten...   119   1e-25
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph...   116   1e-24
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos...   109   1e-22
tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis...   108   2e-22
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu...   108   3e-22
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ...   107   4e-22
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos...   107   6e-22
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil...   105   2e-21
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs...   105   3e-21
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen...   105   3e-21
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza...   105   3e-21
tr|O64985|O64985_CHLRE Poly(A) binding protein RB47 OS=Chlamydom...   104   5e-21
tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47 OS=Chl...   104   5e-21
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil...   104   5e-21
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog...   103   6e-21
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba...   103   8e-21
tr|Q014N8|Q014N8_OSTTA Polyadenylate-binding protein, putative /...   103   8e-21
tr|B8MGJ6|B8MGJ6_9EURO Polyadenylate-binding protein OS=Talaromy...   103   8e-21
tr|B6QKP6|B6QKP6_PENMA Polyadenylate-binding protein OS=Penicill...   103   8e-21
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs...   102   1e-20
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ...   102   1e-20
tr|A4S0L2|A4S0L2_OSTLU Predicted protein OS=Ostreococcus lucimar...   102   1e-20
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza...   102   1e-20
tr|A6RAN8|A6RAN8_AJECN Polyadenylate-binding protein OS=Ajellomy...   102   1e-20
tr|Q7RDM4|Q7RDM4_PLAYO PolyA binding protein-related OS=Plasmodi...   102   2e-20
tr|Q4Z2X5|Q4Z2X5_PLABE Polyadenylate-binding protein, putative O...   102   2e-20
tr|Q4Y7Z4|Q4Y7Z4_PLACH Polyadenylate-binding protein, putative (...   102   2e-20

>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
          Length = 439

 Score =  128 bits (321), Expect = 3e-28
 Identities = 59/82 (71%), Positives = 75/82 (91%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           PAP+ +++ SLYVGDL+PNV+EAQLYE+F+ VGQV+SIRVCRDL+T+RSLGY+YVNY+N 
Sbjct: 16  PAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNA 75

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            DATRA+E+LNFT VNGK +RI
Sbjct: 76  QDATRALELLNFTGVNGKPIRI 97



 Score = 43.5 bits (101), Expect = 0.010
 Identities = 26/75 (34%), Positives = 45/75 (60%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           Y   +LY+ +LD  V++ ++ E+F   G + S +V RD    +S G  +V +S+  +ATR
Sbjct: 303 YQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRD-HQGQSKGSGFVAFSSPDEATR 361

Query: 564 AMEVLNFTEVNGKLM 608
           A+     TE+NGK++
Sbjct: 362 AV-----TEMNGKMV 371


>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
          Length = 650

 Score =  122 bits (306), Expect = 2e-26
 Identities = 56/82 (68%), Positives = 73/82 (89%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           P P+ +++ SLYVGDL+PNV+EAQLYE+FT VGQV+SIRVCRDL+T+RSLGYAYVNY++ 
Sbjct: 20  PPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSA 79

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            DATRA+E+LNF+ +NG  +RI
Sbjct: 80  QDATRALELLNFSVLNGNPIRI 101



 Score = 44.3 bits (103), Expect = 0.006
 Identities = 27/75 (36%), Positives = 45/75 (60%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           Y   +LY+ +LD  V++ +L E+F   G + S +V RD    +S G  +V +S+  +ATR
Sbjct: 307 YQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRD-PQGQSRGSGFVAFSSPEEATR 365

Query: 564 AMEVLNFTEVNGKLM 608
           A+     TE+NGK++
Sbjct: 366 AV-----TEMNGKMV 375


>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
          Length = 645

 Score =  122 bits (305), Expect = 2e-26
 Identities = 57/82 (69%), Positives = 71/82 (86%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           PAP  +++ SLYVGDL+  V+EAQLYE+F+ VGQV+SIRVCRDL+T+RSLGYAYVNY+N 
Sbjct: 16  PAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNA 75

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            DATRA+E+LNF  VNGK +RI
Sbjct: 76  QDATRALELLNFNAVNGKPIRI 97



 Score = 45.8 bits (107), Expect = 0.002
 Identities = 26/75 (34%), Positives = 47/75 (62%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           Y   +LY+ +LD  +++ +L E+F+  G ++S +V RD    +S G  +V +S+  +ATR
Sbjct: 303 YQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRD-PQGQSRGSGFVAFSSPDEATR 361

Query: 564 AMEVLNFTEVNGKLM 608
           A+     TE+NGK++
Sbjct: 362 AV-----TEMNGKMV 371


>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
          Length = 647

 Score =  119 bits (298), Expect = 1e-25
 Identities = 55/82 (67%), Positives = 71/82 (86%)
 Frame = +3

Query: 369 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 548
           PAP+ +++ S+YVGDL+ NV+EAQLYE+F+  G V+SIRVCRDL+T+RSLGYAYVNY + 
Sbjct: 16  PAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSA 75

Query: 549 PDATRAMEVLNFTEVNGKLMRI 614
            DATRA+E+LNFT VNGK +RI
Sbjct: 76  QDATRALELLNFTPVNGKPIRI 97



 Score = 39.7 bits (91), Expect = 0.14
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           Y   +LY+ +LD  V++ +L E+F   G + S +V +D    +S G  +V +S   +ATR
Sbjct: 303 YQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKD-PQGQSRGSGFVAFSTPEEATR 361

Query: 564 AMEVLNFTEVNGK 602
           A+  +N   V  K
Sbjct: 362 AVTEMNTKMVGSK 374


>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
           phyllitidis PE=2 SV=1
          Length = 638

 Score =  116 bits (290), Expect = 1e-24
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 366 IPAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSN 545
           I   SPY+  SLYVGDLDP+V+E++LYEVF  +GQV+SIRVCRDL+TK+SLGYAYVNY  
Sbjct: 17  ISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGT 76

Query: 546 IPDATRAMEVLNFTEVNGKLMRI 614
             DA++A+E+LNFT V GK +RI
Sbjct: 77  HQDASQALELLNFTLVKGKPIRI 99


>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
           chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
           vinifera GN=GSVIVT00036627001 PE=4 SV=1
          Length = 648

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 10/92 (10%)
 Frame = +3

Query: 369 PAPSP----------YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSL 518
           P P+P          ++T SLYVGDL+ NVN++QLY++F+ +G V+S+RVCRDL T+RSL
Sbjct: 12  PGPAPNGAAGAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSL 71

Query: 519 GYAYVNYSNIPDATRAMEVLNFTEVNGKLMRI 614
           GY YVNYSN  DA RA++VLNFT +NGK +RI
Sbjct: 72  GYGYVNYSNPQDAARALDVLNFTPLNGKPIRI 103



 Score = 38.1 bits (87), Expect = 0.41
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           +LY+ +LD ++ + +L E+F   G + S +V RD     S G  +V +S+  +A+RA+  
Sbjct: 313 NLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRD-PNGLSRGSGFVAFSSPEEASRALAE 371

Query: 576 LNFTEVNGK 602
           +N   V  K
Sbjct: 372 MNSKMVVSK 380


>tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011270 PE=4 SV=1
          Length = 185

 Score =  108 bits (271), Expect = 2e-22
 Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 10/92 (10%)
 Frame = +3

Query: 369 PAPSP----------YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSL 518
           P P+P          ++T SLYVGDL+ NVN+ QLY++F  +G V+S+RVCRDL T+RSL
Sbjct: 12  PGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSL 71

Query: 519 GYAYVNYSNIPDATRAMEVLNFTEVNGKLMRI 614
           GY YVNYSN  DA RA++VLNFT +NGK +RI
Sbjct: 72  GYGYVNYSNPQDAARALDVLNFTPLNGKPLRI 103


>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
           PE=2 SV=1
          Length = 649

 Score =  108 bits (269), Expect = 3e-22
 Identities = 49/77 (63%), Positives = 65/77 (84%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           ++T SLYVGDLD NV ++QLY++F  VGQV+S+RVCRDL ++RSLGY YVNYSN  DA+R
Sbjct: 26  HVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASR 85

Query: 564 AMEVLNFTEVNGKLMRI 614
           A++VLNFT +NG  +R+
Sbjct: 86  ALDVLNFTPLNGNPIRV 102



 Score = 43.9 bits (102), Expect = 0.007
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = +3

Query: 393 NSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAME 572
           N+++V +L    +E  L  +F   G + S+ V RD   K S  + +VN+ N  DA R++E
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK-SKCFGFVNFENADDAARSVE 266

Query: 573 VLNFTEVNGK 602
            LN  +V+GK
Sbjct: 267 ALNGKKVDGK 276



 Score = 42.4 bits (98), Expect = 0.022
 Identities = 26/79 (32%), Positives = 45/79 (56%)
 Frame = +3

Query: 372 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 551
           A   Y   +LYV +LD ++++ +L E+FT  G + S +V RD     S G  +V +S+  
Sbjct: 304 AADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPE 362

Query: 552 DATRAMEVLNFTEVNGKLM 608
           +A RA+      E+NG+++
Sbjct: 363 EAARAL-----AEMNGRMI 376


>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota
           PE=2 SV=1
          Length = 658

 Score =  107 bits (268), Expect = 4e-22
 Identities = 50/77 (64%), Positives = 63/77 (81%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           + T SLYVGDLD +V ++QLY++F  VGQV+S+RVCRDL T RSLGY YVNYSN  DATR
Sbjct: 37  FTTTSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATR 96

Query: 564 AMEVLNFTEVNGKLMRI 614
           A++VLNFT +N K +R+
Sbjct: 97  AIDVLNFTPLNNKTIRV 113



 Score = 40.4 bits (93), Expect = 0.083
 Identities = 25/75 (33%), Positives = 44/75 (58%)
 Frame = +3

Query: 384 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 563
           Y   +LYV +LD  +++ +L E+F+  G + S +V RD  +  S G  +V +S   +A+R
Sbjct: 319 YQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRD-PSGISRGSGFVAFSTPEEASR 377

Query: 564 AMEVLNFTEVNGKLM 608
           A+      E+NGK++
Sbjct: 378 AL-----GEMNGKMI 387


>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
           chr18 scaffold_1, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
          Length = 640

 Score =  107 bits (267), Expect = 6e-22
 Identities = 50/75 (66%), Positives = 62/75 (82%)
 Frame = +3

Query: 390 TNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAM 569
           T SLYVGDLD N+ ++QLY++F   GQVLS+RVCRDL T+RSLGY YVNYSN  DA RA+
Sbjct: 17  TASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 76

Query: 570 EVLNFTEVNGKLMRI 614
           ++LNFT +NGK +RI
Sbjct: 77  DLLNFTPLNGKPIRI 91



 Score = 42.0 bits (97), Expect = 0.028
 Identities = 24/71 (33%), Positives = 44/71 (61%)
 Frame = +3

Query: 396 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 575
           +LY+ +LD ++ + +L E+F+  G + S +V RD  +  S G  +V +S   +A+RA+  
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRD-PSGISRGSGFVAFSTSEEASRAL-- 357

Query: 576 LNFTEVNGKLM 608
              TE+NGK++
Sbjct: 358 ---TEMNGKMV 365