DK962341
Clone id TST39A01NGRL0013_J19
Library
Length 578
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_J19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGTGATTGTACGCAGTATTCAGTATGGGCATCTCCATAGCCGCTTCCTCGGCAGTTGTC
GCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCACGGCCACT
ACCCTGTTCGCCCCCAAGAGCGCCAACCCGATCGCCATCTCTGGTGGCAGCCGTGTGAGC
GCCCTGCTGGTGTGGAAGCCGTAGGACGACGAGAAGTTCGAGACTCGGTCCTACTTGCCG
CCTTTGTCAAGTGAGGAGATTGCGAAGAATGGGGACTGCGTGGTCCGAAAAGGCTGGACC
CCTTGCATTGAGTTCCACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGC
TACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCC
GCTGCTGCGCTGCGTGAGATTGCATACTGCGCCAAGGAGTATCCTGAAACCTTCATCCGC
GTGCTGGGCTTTGACGCTCAGACGCACGTGCAGGTCTCCGGCTTCCTTGTCAAGAAGCCC
TCTGTCTAAACTTTCTTAAAACAAGCCAATTTAGTTGG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 157
Score (bit) 160.0
E-value 6.0e-39
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962341|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J19, 5'
(578 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 160 6e-39
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 157 3e-38
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 157 5e-38
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 156 8e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 155 2e-37
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 154 2e-37
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 154 3e-37
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 154 4e-37
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 154 4e-37
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 154 4e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 152 9e-37
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 152 1e-36
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 152 1e-36
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 152 1e-36
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 152 1e-36
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 151 2e-36
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 151 3e-36
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 150 3e-36
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 150 4e-36
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 150 6e-36
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 149 8e-36
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 149 8e-36
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 149 8e-36
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 149 1e-35
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 149 1e-35
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 149 1e-35
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 149 1e-35
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha... 148 2e-35
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 147 3e-35
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai... 147 3e-35

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 160 bits (404), Expect = 6e-39
Identities = 79/157 (50%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
Frame = +1

Query: 85 SLSKSFSGLTATTLF--APKSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
SL+ F+GL + F K+ N + S G RV + VW P +K+ET SYLPPLS
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 253 EEIAKNGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAA 429
E ++K D ++R W PC+EF + G VYREH H GYYDGRYW MWKLPMFGC D+A
Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 430 LREIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
++E+ C KEYP FIRV+GFD VQ F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 157 bits (398), Expect = 3e-38
Identities = 74/148 (50%), Positives = 94/148 (63%)
Frame = +1

Query: 97 SFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNGD 276
S + T FA S P S G RV + VW P +KFET SYLPPL+ E++ + D
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 277 CVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCAK 456
++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ L+E+ C+K
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 457 EYPETFIRVLGFDAQTHVQVSGFLVKKP 540
YP+ F R++GFD VQ FL KP
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 157 bits (396), Expect = 5e-38
Identities = 77/157 (49%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Frame = +1

Query: 85 SLSKSFSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
S+ F+GL ++ F K+ N ++ S G RVS + VW P +KFET SYLPPLS
Sbjct: 21 SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 253 EEIAKNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAAL 432
E++AK D ++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ +
Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140

Query: 433 REIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
E+ K YPE F+R++GFD + VQ F+ KP+
Sbjct: 141 AEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 156 bits (394), Expect = 8e-38
Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
Frame = +1

Query: 100 FSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
F+GL ++ F K+ N ++ S G RVS + VW P +KFET SYLPPLS E++AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 268 NGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
D ++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ + E+
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K YPE F+R++GFD + VQ F+ KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177

Score = 155 bits (391), Expect = 2e-37
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 4/152 (2%)
Frame = +1

Query: 100 FSGLTATTLF-APKSANP---IAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
F+GL ++ F A + AN S G +VS + VW P +KFET SYLPPLS E++AK
Sbjct: 26 FNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 268 NGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
D ++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ + E+
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K YPE F+R++GFD + VQ F+ KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 154 bits (390), Expect = 2e-37
Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Frame = +1

Query: 85 SLSKSFSGLTATTLF--APKSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
S+ F+ L +T+ F K+ N I S G RV + VW P +KFET SYLPPLSS
Sbjct: 23 SMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 82

Query: 253 EEIAKNGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAA 429
E++AK D ++RK PC+EF + G VYREH GYYDGRYW MWKLPMFGC D++
Sbjct: 83 EQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQV 142

Query: 430 LREIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
L+E+ C K YP FIR++GFD + VQ+ F+ KP
Sbjct: 143 LKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 154 bits (389), Expect = 3e-37
Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Frame = +1

Query: 100 FSGLTATTLF-APKSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKN 270
F+GL +++ F + +N I S G RV + VW P +KFET SYLPPLSSE +AK
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 271 GDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
D ++RK W PC+EF + G VYRE+ GYYDGRYW MWKLPMFGC D++ L+E+
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K YP++FIR++GFD VQ F+ KP+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 154 bits (388), Expect = 4e-37
Identities = 70/128 (54%), Positives = 86/128 (67%)
Frame = +1

Query: 160 SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNGDCVVRKGWTPCIEFHKIGSVYR 339
S G RVS + VW P +KFET SYLPPLS E++AK D ++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCAKEYPETFIRVLGFDAQTHVQVS 519
E+ GYYDGRYW MWKLPMFGC DA+ + E+ K YPE F+R++GFD + VQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 520 GFLVKKPS 543
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small chain
SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2
Length = 173

Score = 154 bits (388), Expect = 4e-37
Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Frame = +1

Query: 97 SFSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIA 264
+F+G ++ F K+ N ++ S G RVS + VW P +KFET SYLPPLS E++A
Sbjct: 21 AFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 80

Query: 265 KNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
K D ++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ + E+
Sbjct: 81 KEVDYLLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 140

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K YPE F+R++GFD + VQ F+ KP+
Sbjct: 141 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 173


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 154 bits (388), Expect = 4e-37
Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 5/152 (3%)
Frame = +1

Query: 100 FSGLTATTLFAP--KSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
F+GL ++ F K+ N I S G RV+ + VW P +KFET SYLP L+ E+AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 268 NGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++R W PC+EF + G VYREH + GYYDGRYW MWKLP+FGC D+A L+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
C KEYP FIR++GFD VQ F+ KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 154
Score (bit) 256.0
E-value 8.0e-67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962341|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J19, 5'
(578 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 256 8e-67
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 174 4e-42
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 171 3e-41
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 170 5e-41
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 164 4e-39
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 163 6e-39
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 163 6e-39
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 162 1e-38
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 160 4e-38
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 160 5e-38
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 160 6e-38
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 159 8e-38
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 158 2e-37
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 158 2e-37
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 158 2e-37
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 157 3e-37
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 157 4e-37
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 155 1e-36
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 155 1e-36
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 155 2e-36
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 155 2e-36
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c... 154 3e-36
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 154 4e-36
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t... 152 1e-35
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar... 152 2e-35
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 152 2e-35
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 151 2e-35

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 256 bits (653), Expect = 8e-67
Identities = 119/154 (77%), Positives = 135/154 (87%)
Frame = +1

Query: 82 ESLSKSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEI 261
ESLSKSFSGL A TLFAPK ANP+AIS GSR+SA+LVWKP D++KFET SYLPPL++++I
Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 262 AKNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREI 441
AK + +VRKGWTPCIEF IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ + LREI
Sbjct: 80 AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139

Query: 442 AYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
A CAKEYP FIRVLGFDA+ VQV+GFLVKKPS
Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 174 bits (440), Expect = 4e-42
Identities = 82/153 (53%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K FSGL +TTLFA K+ ++ GSRV + VW P KFET SYLPPL+ ++IAK
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +GSV R +F G SGYYDGRYW MWKLPMFGC D+A LREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C + +P ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 171 bits (432), Expect = 3e-41
Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL + TLF+ K+ ++ GSRV + VW P KFET SYLPPL+ ++IAK
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +GSV R +F G SGYYDGRYW MWKLPMFGC D++ LREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C ++P ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 171 bits (432), Expect = 3e-41
Identities = 80/153 (52%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL + TLF KS ++ GSRV + VW P KFET SYLPPLS ++IA+
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +G+V R +F GSG YYDGRYW MWKLPMFGC D++ LREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C YP ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 171 bits (432), Expect = 3e-41
Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL TLF+ K+ A+ GSRV + VW P KFET SYLPPL+ ++IAK
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +GSV R +F G SGYYDGRYW MWKLPMFGC D++ LREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C ++P ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 171 bits (432), Expect = 3e-41
Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K FSGL +TTL A K+ ++ GSRV + VW P KFET SYLPPL+ ++IAK
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +GSV R +F G SGYYDGRYW MWKLPMFGC D+A LREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C + +P ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 170 bits (431), Expect = 5e-41
Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL + TLF+ ++ ++ GSRV + VW P KFET SYLPPL+ +EIAK
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
D ++++ PCIEF +GSV R +F G SGYYDGRYW MWKLPMFGC D++ LREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
C ++P ++RVLGFD++ VQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 164 bits (414), Expect = 4e-39
Identities = 77/150 (51%), Positives = 99/150 (66%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL + T+F+ K+ N ++ GSRV + VW P KFET SYLPPLS + IAK
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
+ ++++ PC+EF V R + GYYDGRYW MWKLPMFGCQD+A LREI C
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K +P F+RVLGFD VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 163 bits (413), Expect = 6e-39
Identities = 78/150 (52%), Positives = 99/150 (66%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL ++TLF+ K+ + ++ GSRV + VW P KFET SYLPPLS + IAK
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
D ++++ PC+EF V R + GYYDGRYW MWKLPMFGCQD A LREI C
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K +P F+RVLGFD VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123666 PE=3 SV=1
Length = 181

Score = 163 bits (413), Expect = 6e-39
Identities = 78/150 (52%), Positives = 100/150 (66%)
Frame = +1

Query: 94 KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
K+FSGL + TLF+ +S ++ GSRV+ + VW P KFET SYLPPLS + IAK
Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
+ ++++ PC+EF V RE+ GYYDGRYW MWKLPMFGCQD+A LREI C
Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
K +P F+RVLGFD VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181