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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962341
Clone id TST39A01NGRL0013_J19
Library
Length 578
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_J19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGTGATTGTACGCAGTATTCAGTATGGGCATCTCCATAGCCGCTTCCTCGGCAGTTGTC
GCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCACGGCCACT
ACCCTGTTCGCCCCCAAGAGCGCCAACCCGATCGCCATCTCTGGTGGCAGCCGTGTGAGC
GCCCTGCTGGTGTGGAAGCCGTAGGACGACGAGAAGTTCGAGACTCGGTCCTACTTGCCG
CCTTTGTCAAGTGAGGAGATTGCGAAGAATGGGGACTGCGTGGTCCGAAAAGGCTGGACC
CCTTGCATTGAGTTCCACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGC
TACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCC
GCTGCTGCGCTGCGTGAGATTGCATACTGCGCCAAGGAGTATCCTGAAACCTTCATCCGC
GTGCTGGGCTTTGACGCTCAGACGCACGTGCAGGTCTCCGGCTTCCTTGTCAAGAAGCCC
TCTGTCTAAACTTTCTTAAAACAAGCCAATTTAGTTGG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 157
Score (bit) 160.0
E-value 6.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962341|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J19, 5'
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   160   6e-39
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   157   3e-38
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   157   5e-38
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   156   8e-38
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   155   2e-37
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   154   2e-37
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   154   3e-37
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   154   4e-37
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   154   4e-37
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   154   4e-37
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   152   9e-37
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   152   1e-36
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   152   1e-36
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   152   1e-36
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   151   2e-36
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   151   3e-36
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   150   3e-36
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   150   4e-36
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   150   6e-36
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   149   8e-36
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   149   8e-36
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   149   8e-36
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   149   1e-35
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   149   1e-35
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   149   1e-35
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   149   1e-35
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   148   2e-35
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   147   3e-35

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  160 bits (404), Expect = 6e-39
 Identities = 79/157 (50%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
 Frame = +1

Query: 85  SLSKSFSGLTATTLF--APKSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
           SL+  F+GL +   F    K+ N  +   S G RV  + VW P   +K+ET SYLPPLS 
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 253 EEIAKNGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAA 429
           E ++K  D ++R  W PC+EF  + G VYREH H  GYYDGRYW MWKLPMFGC D+A  
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 430 LREIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
           ++E+  C KEYP  FIRV+GFD    VQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  157 bits (398), Expect = 3e-38
 Identities = 74/148 (50%), Positives = 94/148 (63%)
 Frame = +1

Query: 97  SFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNGD 276
           S +    T  FA  S  P   S G RV  + VW P   +KFET SYLPPL+ E++ +  D
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 277 CVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCAK 456
            ++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++  L+E+  C+K
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147

Query: 457 EYPETFIRVLGFDAQTHVQVSGFLVKKP 540
            YP+ F R++GFD    VQ   FL  KP
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  157 bits (396), Expect = 5e-38
 Identities = 77/157 (49%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
 Frame = +1

Query: 85  SLSKSFSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
           S+   F+GL ++  F    K+ N ++   S G RVS + VW P   +KFET SYLPPLS 
Sbjct: 21  SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 253 EEIAKNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAAL 432
           E++AK  D ++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+  +
Sbjct: 81  EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVI 140

Query: 433 REIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            E+    K YPE F+R++GFD +  VQ   F+  KP+
Sbjct: 141 AEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  156 bits (394), Expect = 8e-38
 Identities = 76/152 (50%), Positives = 98/152 (64%), Gaps = 4/152 (2%)
 Frame = +1

Query: 100 FSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
           F+GL ++  F    K+ N ++   S G RVS + VW P   +KFET SYLPPLS E++AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 268 NGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
             D ++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+  + E+  
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
             K YPE F+R++GFD +  VQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  155 bits (391), Expect = 2e-37
 Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 4/152 (2%)
 Frame = +1

Query: 100 FSGLTATTLF-APKSANP---IAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
           F+GL ++  F A + AN       S G +VS + VW P   +KFET SYLPPLS E++AK
Sbjct: 26  FNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 268 NGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
             D ++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+  + E+  
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
             K YPE F+R++GFD +  VQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  154 bits (390), Expect = 2e-37
 Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
 Frame = +1

Query: 85  SLSKSFSGLTATTLF--APKSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSS 252
           S+   F+ L +T+ F    K+ N I    S G RV  + VW P   +KFET SYLPPLSS
Sbjct: 23  SMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 82

Query: 253 EEIAKNGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAA 429
           E++AK  D ++RK   PC+EF  + G VYREH    GYYDGRYW MWKLPMFGC D++  
Sbjct: 83  EQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQV 142

Query: 430 LREIAYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
           L+E+  C K YP  FIR++GFD +  VQ+  F+  KP
Sbjct: 143 LKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  154 bits (389), Expect = 3e-37
 Identities = 75/152 (49%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
 Frame = +1

Query: 100 FSGLTATTLF-APKSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKN 270
           F+GL +++ F   + +N I    S G RV  + VW P   +KFET SYLPPLSSE +AK 
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 271 GDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAY 447
            D ++RK W PC+EF  + G VYRE+    GYYDGRYW MWKLPMFGC D++  L+E+  
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 448 CAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
             K YP++FIR++GFD    VQ   F+  KP+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  154 bits (388), Expect = 4e-37
 Identities = 70/128 (54%), Positives = 86/128 (67%)
 Frame = +1

Query: 160 SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNGDCVVRKGWTPCIEFHKIGSVYR 339
           S G RVS + VW P   +KFET SYLPPLS E++AK  D ++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 340 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCAKEYPETFIRVLGFDAQTHVQVS 519
           E+    GYYDGRYW MWKLPMFGC DA+  + E+    K YPE F+R++GFD +  VQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 520 GFLVKKPS 543
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2
          Length = 173

 Score =  154 bits (388), Expect = 4e-37
 Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
 Frame = +1

Query: 97  SFSGLTATTLFAP--KSANPIAI--SGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIA 264
           +F+G  ++  F    K+ N ++   S G RVS + VW P   +KFET SYLPPLS E++A
Sbjct: 21  AFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 80

Query: 265 KNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           K  D ++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+  + E+ 
Sbjct: 81  KEVDYLLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 140

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
              K YPE F+R++GFD +  VQ   F+  KP+
Sbjct: 141 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 173


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  154 bits (388), Expect = 4e-37
 Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 5/152 (3%)
 Frame = +1

Query: 100 FSGLTATTLFAP--KSANPIA--ISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAK 267
           F+GL ++  F    K+ N I    S G RV+ + VW P   +KFET SYLP L+  E+AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 268 NGDCVVRKGWTPCIEFH-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
             D ++R  W PC+EF  + G VYREH +  GYYDGRYW MWKLP+FGC D+A  L+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKP 540
            C KEYP  FIR++GFD    VQ   F+  KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 154
Score (bit) 256.0
E-value 8.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962341|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_J19, 5'
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   256   8e-67
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   171   3e-41
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   170   5e-41
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   164   4e-39
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   163   6e-39
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   163   6e-39
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   160   5e-38
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   160   6e-38
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   159   8e-38
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   158   2e-37
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   157   3e-37
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   157   4e-37
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   155   2e-36
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   154   4e-36
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   152   1e-35
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...   152   2e-35
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   152   2e-35
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   151   2e-35

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  256 bits (653), Expect = 8e-67
 Identities = 119/154 (77%), Positives = 135/154 (87%)
 Frame = +1

Query: 82  ESLSKSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEI 261
           ESLSKSFSGL A TLFAPK ANP+AIS GSR+SA+LVWKP D++KFET SYLPPL++++I
Sbjct: 20  ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 262 AKNGDCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREI 441
           AK  + +VRKGWTPCIEF  IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ + LREI
Sbjct: 80  AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREI 139

Query: 442 AYCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
           A CAKEYP  FIRVLGFDA+  VQV+GFLVKKPS
Sbjct: 140 AECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  174 bits (440), Expect = 4e-42
 Identities = 82/153 (53%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K FSGL +TTLFA K+    ++  GSRV  + VW P    KFET SYLPPL+ ++IAK  
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A  LREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C + +P  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  171 bits (432), Expect = 3e-41
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL + TLF+ K+    ++  GSRV  + VW P    KFET SYLPPL+ ++IAK  
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +GSV R +F G   SGYYDGRYW MWKLPMFGC D++  LREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C  ++P  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  171 bits (432), Expect = 3e-41
 Identities = 80/153 (52%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL + TLF  KS    ++  GSRV  + VW P    KFET SYLPPLS ++IA+  
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +G+V R +F GSG   YYDGRYW MWKLPMFGC D++  LREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C   YP  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  171 bits (432), Expect = 3e-41
 Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL   TLF+ K+    A+  GSRV  + VW P    KFET SYLPPL+ ++IAK  
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +GSV R +F G   SGYYDGRYW MWKLPMFGC D++  LREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C  ++P  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  171 bits (432), Expect = 3e-41
 Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K FSGL +TTL A K+    ++  GSRV  + VW P    KFET SYLPPL+ ++IAK  
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A  LREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C + +P  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  170 bits (431), Expect = 5e-41
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL + TLF+ ++    ++  GSRV  + VW P    KFET SYLPPL+ +EIAK  
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAALREIA 444
           D ++++   PCIEF  +GSV R +F G   SGYYDGRYW MWKLPMFGC D++  LREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 445 YCAKEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
            C  ++P  ++RVLGFD++  VQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  164 bits (414), Expect = 4e-39
 Identities = 77/150 (51%), Positives = 99/150 (66%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL + T+F+ K+ N  ++  GSRV  + VW P    KFET SYLPPLS + IAK  
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
           + ++++   PC+EF     V R +    GYYDGRYW MWKLPMFGCQD+A  LREI  C 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
           K +P  F+RVLGFD    VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  163 bits (413), Expect = 6e-39
 Identities = 78/150 (52%), Positives = 99/150 (66%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL ++TLF+ K+ +  ++  GSRV  + VW P    KFET SYLPPLS + IAK  
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
           D ++++   PC+EF     V R +    GYYDGRYW MWKLPMFGCQD A  LREI  C 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
           K +P  F+RVLGFD    VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  163 bits (413), Expect = 6e-39
 Identities = 78/150 (52%), Positives = 100/150 (66%)
 Frame = +1

Query: 94  KSFSGLTATTLFAPKSANPIAISGGSRVSALLVWKP*DDEKFETRSYLPPLSSEEIAKNG 273
           K+FSGL + TLF+ +S    ++  GSRV+ + VW P    KFET SYLPPLS + IAK  
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 274 DCVVRKGWTPCIEFHKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAALREIAYCA 453
           + ++++   PC+EF     V RE+    GYYDGRYW MWKLPMFGCQD+A  LREI  C 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 454 KEYPETFIRVLGFDAQTHVQVSGFLVKKPS 543
           K +P  F+RVLGFD    VQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181